BGIOSGA024440

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Revision as of 06:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024440, complete gene.| tag = P0613B0...")
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Gene Name

BGIOSGA024440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024440, complete gene.

LocusTag

P0613B07.138

Ensembl Transcript ID

BGIOSGA024440-TA

Ensembl Protein ID

BGIOSGA024440-PA

Length

5397

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:11705554..11710950

Sequence Coding Region

11710794..11710950,11709135..11709370,11708958..11709052,11708732..11708846,11707718..11707926
,11707437..11707586,11707238..11707358,11706788..11707017,11706189..11706389
,11705554..11705809

Genome Context

<gbrowseImage1> name=IndicaChromosome07:11705554..11710950 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:11705554..11710950 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCTCCTGCATGAGGTGCTCCCCGGCCGCCGGCGCCGTACGACGAGGATTGGCATCGGCGGCTCCGCCGGCGGCGCTCTCCTTCGCCAGATGCGGCCTCCGTAGAGCGGCCGCGCTCGGGTGGCGCGTCGCCGCCGTCACCACTACGGGAGTGCAAGGTGCCAAGGATGCTGGTCTGGAGAAGGCTGCCAGAAGTGCTTCCCAATCAAAGGTGGAAAATGGCTCACCTTCAGAAATCATTTTAGATGATTTTGAAGACTTGAGCCCTCTATCAGAAAATGATGACTCCACTGTTAGTATCACTGTAGTCGGAGCATCTGGTGACCTTGCCAAGAAGAAGATATTTCCTGCACTTTTTGCTCTATACTATGAAGATTGTCTTCCAAAGCATTTCACTATCTTCGGATATGCACGCAGCAAGATGACAGATGCTGAATTGAGAAACATGGTCAGCAAAACACTGACATGCAGAATAGATAAAAGGGAAAACTGTAATGAGAAGATGGAAGAGTTTTTAAAGAGATGCTTCTATCATTCAGGCCAATATGATTCAGAGGAGCATTTCATGGACCTTGACAAGAAGCTGAAACAACATGAGGGTTCCAGAGTTTCTAACCGTCTTTTCTACTTGTCAATACCACCAAATATATTCCTTGATGTTGTAAAATGTGCAAGCAAATCAGCATCATCTGGGAATGGTTGGACAAGGGTAATTGTTGAGAAACCTTTTGGTCGTGACTCAGATTCATCTTCTGCATTAACAAGGGGTCTGAAGCAGTACCTGGTAGAGGACCAAATCTTCAGGTGGATTGACCACTACTTGGGAAAGGAACTAGTGGAGAACCTGTCTGTCCTTCGCTTCTCAAATCTTGTTTTTGAACCTCTATGGTCAAGGCAGTATATAAGGAATGTGCAGCTGATATTCTCAGAGGATTTCGGCACTGAAGGACGAGGAGGGTACTTTGATAGGTATGGTATTATCCGTGACATAATGCAGAATCATCTTCTTCAGATACTAGCCCTATTTGCAATGGAAACTCCTGTTAGCTTGGAGGCAGAGGACATAAGAAACGAAAAGGTTAAAGTTCTGCGTTCCATGAAGCCCCTGCAACTGGAAGATGTGGTGATAGGACAGTACAAAAGTCATACAAAGGGTGGTACCACATACCCTGGATACACTGAAGATAAGACGGTGCCCAAGGATAGTGTAACCCCAACATTTGCTGCAGCTGCACTTTTCATAAATAATGCTAGATGGGATGGAGTTCCTTTTCTTATGAAAGCTGGGAAGGCTTTACATACAAAGGGGGCTGAGATTAGAGTACAGTTCCGACATGTTCCTGGTAATCTTTATAAGAGGAGTTTTGGGACTGATCTTGATACAGCCACTAATGAACTTGTCATACGTGTGCAACCTGATGAAGCTATCTACTTGAAGATTAACAACAAAATTCCTGGTCTTGGTATGAGACTAGATAGAAGTAATTTGAATCTTCACTATGCAGCAAGGTACTCCAAGGAGATACCAGATGCTTATGAGAGGCTCTTACTTGATGCCATTGAAGGAGAGCGAAGGCTTTTTATCCGTTCTGATGAGTTGGATGCCGCATGGGAGCTCTTCACTCCCTTACTCAAGGAGCTGGAAGAGAAGCGGATAGCCCCTGAGCTATACCCTTATGGAAGCCGCGGTCCTGTTGGGGCTCACTACCTTGCAGCAAAGTACAACGTCAGATGGGGTGATTTGACCACAGAACAGAAGGCATGA</cdnaseq>

Protein Sequence

<aaseq>MALSCMRCSPAAGAVRRGLASAAPPAALSFARCGLRRAAALGWRVAAVTTTGVQGAKDAGLEKAARSASQSKVENGSPSEIILDDFEDLSPLSENDDSTVSITVVGASGDLAKKKIFPALFALYYEDCLPKHFTIFGYARSKMTDAELRNMVSKTLTCRIDKRENCNEKMEEFLKRCFYHSGQYDSEEHFMDLDKKLKQHEGSRVSNRLFYLSIPPNIFLDVVKCASKSASSGNGWTRVIVEKPFGRDSDSSSALTRGLKQYLVEDQIFRWIDHYLGKELVENLSVLRFSNLVFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDRYGIIRDIMQNHLLQILALFAMETPVSLEAEDIRNEKVKVLRSMKPLQLEDVVIGQYKSHTKGGTTYPGYTEDKTVPKDSVTPTFAAAALFINNARWDGVPFLMKAGKALHTKGAEIRVQFRHVPGNLYKRSFGTDLDTATNELVIRVQPDEAIYLKINNKIPGLGMRLDRSNLNLHYAARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWELFTPLLKELEEKRIAPELYPYGSRGPVGAHYLAAKYNVRWGDLTTEQKA</aaseq>

Gene Sequence

<dnaseqindica>1..157#1581..1816#1899..1993#2105..2219#3025..3233#3365..3514#3593..3713#3934..4163#4562..4762#5142..5397#ATGGCGCTCTCCTGCATGAGGTGCTCCCCGGCCGCCGGCGCCGTACGACGAGGATTGGCATCGGCGGCTCCGCCGGCGGCGCTCTCCTTCGCCAGATGCGGCCTCCGTAGAGCGGCCGCGCTCGGGTGGCGCGTCGCCGCCGTCACCACTACGGGAGGTCGGGTCCCCTTTCCTTTTCCCTTCCTTCCTGCTTCTTAGTTCATTTGCTCGTCTCCGCCTTTGACCCTTCGTCTGTCGTTTTTGAAAATCGAGGGGACACCCGCCCCCTTTTGGGTTGCTCCTCGCATCCTGCGTGGGCTGACTTGCTGATTCGTTTGCCTTGTATCCCTATCCGCCGCATCGCATCCTATCCGCCGTATCGCATCAGTTTCTATGATGATATTCATCTCCTCGCAGTGCCAGATGCAAATGTAATGGCTAATTGGCTATGCGGAAACAAGCCTTGTTGCTGCCAAATTGCGGCCGTTATCTTATTTTAGAGCCGTAATTAGTGGTCATGCAGTAATTCTTGTAAAAAGAAACGCCATATGTGATGAGATAGGTCTGTGTGATACCATTTCAAGTAGTTAATTCCTTTTTTCTGATATGTTTAAGGTTTATTTCCACCAATTCTTGAAATGTTTTCCAGAACACAACATTATGAGCATAGTGCATTAGTTGCTGAATTCATATATGCAATGTTTTAAGTGTCTGTCTCGTGGCATCATAAATTTCAGAAAACTGCAACTATAGTGACAAAACTATCAGTTTGCTGCAACATTAGCAATATATTTCAGTGGGAAAACTGCTACTTTTATGTGGTATGCTACTACAGGACATGTAGGTGACAATAGTAAGCTTGGGCCATGTAAAAGTTGCAGTTTTGTGATAATTTACCACGCCATTGTTGCAGCAAACTGAAATAGGTCGTTAACGTTGTAGCATACTGATAGTTTTATCACTATAGTTGCAGTTTTCTGAAATTTACTCGTTTTTTTTAACAAGATGACATCATTGTTCATTCAGAAAAAAAAGGTTTATATATTCACAACTCCACCGCCACTGCTCGGCTCATCTCTCCTTGAAGAATTGCCATTGAAGGTTGAGAACCCTAGGTAGTTGTATTTTGAAGTCAATGATCTTCTGGGGATCGTAACCCTTTCTGCATGCTATGGGTTGTGATTTGTGAAGCAGCAGTTGGATGAATGTTAGATTACTGTAAGGTGACTTGAAGTAGAACTGCACTAGGTGAAGGAGAGCATCAGTCTGGGAGGAACATATTTAGAATAGAAGGACTTTAAGGACTATGTTTATTCCTCTTTTGCTTGTTTAACGAATGTAGATACAATCCCATCCTACAGATATGATGATTTGATCCTTATTAATCCCTAAATTAATGGGGGGTGATAATTGTGCGATCTTATCTTAAGGCTGAAACTGTTCTGCTACAGTACCGTTCAAGCAAAGCTCCTGCATGAACATTAATACTGCACGTGAAAATTCATCTGAAACTTCCAGCACATAGTGGGTATTTCATGTGATGAAGTTCGTCAAATAGCTATCACATAGTCACTCTTTACTTATCTTATACCTATCAATAGTGCAAGGTGCCAAGGATGCTGGTCTGGAGAAGGCTGCCAGAAGTGCTTCCCAATCAAAGGTGGAAAATGGCTCACCTTCAGAAATCATTTTAGATGATTTTGAAGACTTGAGCCCTCTATCAGAAAATGATGACTCCACTGTTAGTATCACTGTAGTCGGAGCATCTGGTGACCTTGCCAAGAAGAAGATATTTCCTGCACTTTTTGCTCTATACTATGAAGATTGTCTTCCAAAGGTTTGTGTAAATATGCTCCAAACTTATGATATCATTTCAGCTACTCTTGTTAAATCTAAGGGAGAGTATTTTTCTTTCTTAGCATTTCACTATCTTCGGATATGCACGCAGCAAGATGACAGATGCTGAATTGAGAAACATGGTCAGCAAAACACTGACATGCAGAATAGATAAAAGGTGCTTAAGTAGGCTGGACTTATTAACCATAATTCTTAACATCCTTAGGTAAATGGAGCCTTTGTGCATACATTTTCATCAGTGATGCTTGAAACTATTCTTTCTTTCCAGGGAAAACTGTAATGAGAAGATGGAAGAGTTTTTAAAGAGATGCTTCTATCATTCAGGCCAATATGATTCAGAGGAGCATTTCATGGACCTTGACAAGAAGCTGAAACAACATGAGGTTTGTATATGCACTTCATGTTAAAACAAGAATGAGTCATTAATCGTGCTTCTAAGAAAAAAAATCATATGGTAACATTATTTATTTTTGTTTGGATAAATTCTTCATAGATCCTGCTTTTCAGTTACATAATCTTACTACTTTTTTTAATGAGCATTAATATCTAAAGATGTATTATCCCTAGACTGTAAATACACTAGTCCGTTGAGAAAGCACCAGCAAATTTTTGACACATTGAATGCAGAGAGAAACATTGCAAAACAGGATCCACTTAGCTAGCATCTAAATCAGAAAAGCATTTGTGGGTTACTCTCCACTTCTGAAAAGCAGAAATTGCTTTCTTGTGCTTATTCTTTAAGTTGCTGCGGAAAAGCATCTGTGCATAATAGTGTAGCTTACTCCCTCCGTTTCACAATGTAAGTCATTCTACCATTTCTCACATTCATATTGATGTTAATGAATCTAGACATATATATCTATATAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGAAGTATTTGAGAAATCTAAGATTAGACAAATTCAGCTATCCAACCATTATTTTGTGGGTTGCCTTTTGAAGCAGAATAGTTTCTTTTTACAACCTGGGTTAGAAGAAAAGCAATTAGCGAAACACCATAATTGCTAAATGCAGTTGCTCCAATCCAGACTATAGTGATCTGCCTCTATGCCAAGAAGAGCTTAAATTCATGCATGCCCATGGCCATTTTAAATTTGACAATCTGAATGTATTCTTGTACTTCATCTGCAGGGTTCCAGAGTTTCTAACCGTCTTTTCTACTTGTCAATACCACCAAATATATTCCTTGATGTTGTAAAATGTGCAAGCAAATCAGCATCATCTGGGAATGGTTGGACAAGGGTAATTGTTGAGAAACCTTTTGGTCGTGACTCAGATTCATCTTCTGCATTAACAAGGGGTCTGAAGCAGTACCTGGTAGAGGACCAAATCTTCAGGTGGTACATGCTTCTAGTATTTGAGATTGTGTTCATCAGAATATATTCTAAATTAACATATAAATCTAGGTTCATGATTATTCATTTCACAGAGATAATTATGCTTGTTATGTTCCTTTCAACTTGTTATGCAGGATTGACCACTACTTGGGAAAGGAACTAGTGGAGAACCTGTCTGTCCTTCGCTTCTCAAATCTTGTTTTTGAACCTCTATGGTCAAGGCAGTATATAAGGAATGTGCAGCTGATATTCTCAGAGGATTTCGGCACTGAAGGACGAGGAGGGTATGTTTTTGTTGGTTCTTTTATGATATAACCTTAGTTCCCTAGGATTGTCTCTCATTTTATTGTTGAATTGCACAGGTACTTTGATAGGTATGGTATTATCCGTGACATAATGCAGAATCATCTTCTTCAGATACTAGCCCTATTTGCAATGGAAACTCCTGTTAGCTTGGAGGCAGAGGACATAAGAAACGAAAAGGTTTGTGCCCGCTCCTTCAATAATCATCATACGGCAGGCAGATGTACCAAATTAGGGAGGGTGACCCACTTTAATTCTTTCATTTAAGATGTTTCTTACATGTGTTGTATACTTTCAAGTATGACACATTGATCTTGTTACCAGTGCTGTACGTCAGATAAATTTACACATGAAATCACCATTTATTGATCATGTTATATTGCTTTATATTTTCATCCAGGTTAAAGTTCTGCGTTCCATGAAGCCCCTGCAACTGGAAGATGTGGTGATAGGACAGTACAAAAGTCATACAAAGGGTGGTACCACATACCCTGGATACACTGAAGATAAGACGGTGCCCAAGGATAGTGTAACCCCAACATTTGCTGCAGCTGCACTTTTCATAAATAATGCTAGATGGGATGGAGTTCCTTTTCTTATGAAAGCTGGGAAGGCTTTACATACAAAGGGGTATGTATCAATAGAAATAGTTGTCATCACAAATCACACCTTACTATATGACTCTAACCATTGCCACAACATCTTCCCGTTTAGTGCATTTAATAAGAGTTTGGGGAGTTTTTGAATTAATATCCTGAAGGTGATTCTTGTTTCTGTTTTGTTTCTATTTGTGTCTTATTATTTGTTATTTTTTAAGTTCTGCAGTTAGATTAATTTGATAAAACATTTTCTACATTTGTAAAGATTTTATTATGTATTACATTTGATCTACTTTTTAGACAAAATCAAGTAAATATGAGCACTACTATTAATTAATTAGGGTACATACCATAAAAAGATCTTATGGATTATTTTGTATGTAAAAGATCCTTGCTTGTTCTCTTACATGTAAAATATATGAATTCCAGGGCTGAGATTAGAGTACAGTTCCGACATGTTCCTGGTAATCTTTATAAGAGGAGTTTTGGGACTGATCTTGATACAGCCACTAATGAACTTGTCATACGTGTGCAACCTGATGAAGCTATCTACTTGAAGATTAACAACAAAATTCCTGGTCTTGGTATGAGACTAGATAGAAGTAATTTGAATCTTCACTATGCAGCAAGGTAAGGTTAATTTTCCTTCTTTTTTACATTTGTATCCAAGATGTTTTTTTTTTGGTTCCAAGAAAATTGAGTATTATACTTCACTAGATATTTAAGTTAGGTCGAATTGGTTTTTAGTAGTTGTGGTCCTAGTAGCAAATACTAAACGGGAAGTTTTATCTCCTGCTATATCTCATAATTTATTTATTTGTACTGCCCTTTTTGAGTTCATGTTTCGAGCCTTAGCACGCTTCTGAGTTCTGTCTTCAATCACACCGTGGCACATGATGTATCATCTCAATCATTTCCTTAGTAATCTGTTAGTATCATTCAGCAATCTGGTACTTTGGAGTGCTTATTGTATCTTGCTACACTTGTATAAATTGAACTTTTGCCTCAGGTACTCCAAGGAGATACCAGATGCTTATGAGAGGCTCTTACTTGATGCCATTGAAGGAGAGCGAAGGCTTTTTATCCGTTCTGATGAGTTGGATGCCGCATGGGAGCTCTTCACTCCCTTACTCAAGGAGCTGGAAGAGAAGCGGATAGCCCCTGAGCTATACCCTTATGGAAGCCGCGGTCCTGTTGGGGCTCACTACCTTGCAGCAAAGTACAACGTCAGATGGGGTGATTTGACCACAGAACAGAAGGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024440