Os12g0124000

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Revision as of 10:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0124000| Description = SMAD/FHA domain containing protein| Version = NM_001072569.1 GI:115487099 GeneID:4351372| Length = 1648 bp| Definit...")
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Gene Name

Os12g0124000

Description

SMAD/FHA domain containing protein

Version

NM_001072569.1 GI:115487099 GeneID:4351372

Length

1648 bp

Definition

Oryza sativa Japonica Group Os12g0124000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1155730..1157377

Sequence Coding Region

1155805..1156087,1156319..1156383,1156506..1156569,1156700..1156846,1156988..1157115

Expression

GEO Profiles:Os12g0124000

Genome Context

<gbrowseImage1> name=NC_008405:1155730..1157377 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1155730..1157377 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagcagcagtggctactccttccttgctcttctctagcccaacacccaggaggccttcctcctgcttgtcactgccgcctccttgcagcagcagctacgcctccaatggggcgaagctgcagcagccgcggctgcagttcgtcagtcagctaaccagcagaaacagcaacgggagtggcagaagaagcatttccattttgtcgctgaggtgctcttccagtggcactgacagcgcgtcttcttccgccacttcagaaagatgggttcttgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcacgacccggcggcttccagatagcatccgaggcggcggtgacggtgggtcgtgttcctgaacaggctgacatcgtcctgtctgtcgcaacagtttctgggacgcacgcacggctggagaagaaagaggggagcctgttggtaacagacctggagagcacgaatggcacctacatcaacgagaggcgcctcagcccgggtttccccactcccatcgaccccggtagcctcctcatttttggcgacatccacctggccatgttccgtgtttccaagatggtcgtggatgtgcccagtgacgccagtggagctgagcaggaagcagctgagacggctcaagtatcagctgcagcccaacagaccaattaa</cdnaseq>

Protein Sequence

<aaseq>MEAAVATPSLLFSSPTPRRPSSCLSLPPPCSSSYASNGAKLQQP RLQFVSQLTSRNSNGSGRRSISILSLRCSSSGTDSASSSATSERWVLEPAGDGDWRHI GYRVARPGGFQIASEAAVTVGRVPEQADIVLSVATVSGTHARLEKKEGSLLVTDLEST NGTYINERRLSPGFPTPIDPGSLLIFGDIHLAMFRVSKMVVDVPSDASGAEQEAAETA QVSAAAQQTN</aaseq>

Gene Sequence

<dnaseqindica>76..358#590..654#777..840#971..1117#1259..1386#aagaagcgaacaaaaaaagcaaggcactgcatttccctgccactgctgagcagtgagcacaaatcacagacacaaatggaagcagcagtggctactccttccttgctcttctctagcccaacacccaggaggccttcctcctgcttgtcactgccgcctccttgcagcagcagctacgcctccaatggggcgaagctgcagcagccgcggctgcagttcgtcagtcagctaaccagcagaaacagcaacgggagtggcagaagaagcatttccattttgtcgctgaggtgctcttccagtggcactgacagcgcgtcttcttccgccacttcagaaagatgggttcttgagcctgcaggttagtctgctttcaatacttgtgaaaatgatacttgtaatgcaatgtcgatatcccttgtgaactggctcatgcttgtgcctgcctaccggcttaatcatagtatcgtcatcttaccaactttaactagctggtctgaagaaaaaattgcaaaacagaacacagcagcaatattcgtgagtttattgctgtccacctgaacaaacagaacctgctgttgttgaattgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcacgacccggcggcttccagatagcatccgtatgtctctctttgtttctaccttcccagaaattctctggatatccatgctgtaaccgtgctagctcagctgcagccgggtgttctcttggatgaatgaatgtgttgtcttgtgtgtgcaggaggcggcggtgacggtgggtcgtgttcctgaacaggctgacatcgtcctgtctgtcgcaacaggtagtagcatatatatatgcagcacattcattcacttgcattgctctctccataatccatcagacatatgtagcttactaagttgctgcaaatgaaatgaaatggaatggaatggcatgaaaaaaagcagtttctgggacgcacgcacggctggagaagaaagaggggagcctgttggtaacagacctggagagcacgaatggcacctacatcaacgagaggcgcctcagcccgggtttccccactcccatcgaccccggtagcctcctcatttttggtactactacttattagttattactgctacaaattagctcacctcactctcttcagactgcatacaactcgcagcatctcttgcctgctcttcttcgttgtgatcagtctgtgcttgttcctcttttgcattttattgcaggcgacatccacctggccatgttccgtgtttccaagatggtcgtggatgtgcccagtgacgccagtggagctgagcaggaagcagctgagacggctcaagtatcagctgcagcccaacagaccaattaattagcgacctccatgtgctgcttgatgcatcaagacagctcaagaagaactagcttatcagtgctcccaaaggccgacatgaagtgcatatgttacgatcgacagtctcccttgcaaataagcgcatacatatgttgtgtgataggaatgtcacagagcaacaactctggatattaattaatagagggagcgcacataatggtagccccgtgatcaacttaaaatgcatttatcaagtaccaaagatgccaatattacaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0124000, RefSeq:Os12g0124000