Os12g0124400

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Revision as of 10:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0124400| Description = Exostosin-like family protein| Version = NM_001072572.1 GI:115487105 GeneID:4351376| Length = 3038 bp| Definition =...")
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Gene Name

Os12g0124400

Description

Exostosin-like family protein

Version

NM_001072572.1 GI:115487105 GeneID:4351376

Length

3038 bp

Definition

Oryza sativa Japonica Group Os12g0124400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1171748..1174785

Sequence Coding Region

1172080..1172592,1173777..1174691

Expression

GEO Profiles:Os12g0124400

Genome Context

<gbrowseImage1> name=NC_008405:1171748..1174785 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1171748..1174785 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgcgcgcccgcaccctcctcatgccgcttgcggcggcgacgctcctcgtcgcctccaccatcttcctcttcgccgccaccggcgctcgatggcgacccgccgacaccggcctcccggtccccgccgccgacttctctgcggccgtcctagagagcgcagtgaccgacaccaccgccgccgcgaaggagctctcgttcgttgacgagaatggccgccccgacgatcccgcctccagctcggcggccgccgcgagatgcgacccgacccacgccgccgtcagggtattcatgtacgacttgccgccggagttccacttcggcatcctcggctggtcgccgccgacagatggagccgccgacgccgccatgtggccggatgtcggcagcggcgccgccgccccgcggtaccccggtgggctcaaccagcagcacagcgtcgagtactggctcacgctcgatctcctctcctcctcgtcgccgccgtgcggtgccgccgtcagggtcgccgactcccgcgacgccgacgtggtgttcgtgccgttcttcgcgtccctcagctacaatcgccactccagggttgtgcctccggagaaggtgagcagggacaaggaattgcaggagaagctggtcaggtacctgatggcgcagccggagtggaagaggtcgggtggcgccgaccatgtcattgtcgcacaccacccgaatagtttgctccatgcccggtcagtgctgttccccgtggtgttcgtgctgtctgacttcgggagataccatcctagagtagccagcttggagaaggatgtcattgccccttacaagcatatggctaagacgtttgtgaatgactccgccgggtttgatgaccggccgacattgttatacttccggggagcaattttcaggaaggagggagggaacattaggcaggagctatattatatgctcaaagatgaaaaggatgtttattttgcctttggaagtgtccaggaccatggggccagtaaagccagtaagggaatgcacgcatcaaaattttgcctaaacattgcaggggacaccccttcttccaatcgcctgtttgacgctatagtaagtcattgcgtccctgttatcatcagtgacgacatcgagcttccttatgaagatgcattggactattcgaagttttctatctttgttcgctcatctgatgctgtaaaaaagggttacttgatgaggctgattagaggagtaagcaagcatcaatggacaaggatgtggaataggctgaaagaagtggataaacattttgagtatcaatacccatcacagaaggatgatgcggtccaaatgatctggcaagcattggctagaaaggtgccagcaatccgcctgaagtcacataggtctagaagattttctagatatgatagaggaaaataa</cdnaseq>

Protein Sequence

<aaseq>MPPRARTLLMPLAAATLLVASTIFLFAATGARWRPADTGLPVPA ADFSAAVLESAVTDTTAAAKELSFVDENGRPDDPASSSAAAARCDPTHAAVRVFMYDL PPEFHFGILGWSPPTDGAADAAMWPDVGSGAAAPRYPGGLNQQHSVEYWLTLDLLSSS SPPCGAAVRVADSRDADVVFVPFFASLSYNRHSRVVPPEKVSRDKELQEKLVRYLMAQ PEWKRSGGADHVIVAHHPNSLLHARSVLFPVVFVLSDFGRYHPRVASLEKDVIAPYKH MAKTFVNDSAGFDDRPTLLYFRGAIFRKEGGNIRQELYYMLKDEKDVYFAFGSVQDHG ASKASKGMHASKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDDIELPYEDALDYSKFS IFVRSSDAVKKGYLMRLIRGVSKHQWTRMWNRLKEVDKHFEYQYPSQKDDAVQMIWQA LARKVPAIRLKSHRSRRFSRYDRGK</aaseq>

Gene Sequence

<dnaseqindica>2194..2706#95..1009#atggctactccagcctagggagtagggagatcgatccacctccgccatgctccttcctactccaccaatccggccatgaccggagctcgccgccatgccgccgcgcgcccgcaccctcctcatgccgcttgcggcggcgacgctcctcgtcgcctccaccatcttcctcttcgccgccaccggcgctcgatggcgacccgccgacaccggcctcccggtccccgccgccgacttctctgcggccgtcctagagagcgcagtgaccgacaccaccgccgccgcgaaggagctctcgttcgttgacgagaatggccgccccgacgatcccgcctccagctcggcggccgccgcgagatgcgacccgacccacgccgccgtcagggtattcatgtacgacttgccgccggagttccacttcggcatcctcggctggtcgccgccgacagatggagccgccgacgccgccatgtggccggatgtcggcagcggcgccgccgccccgcggtaccccggtgggctcaaccagcagcacagcgtcgagtactggctcacgctcgatctcctctcctcctcgtcgccgccgtgcggtgccgccgtcagggtcgccgactcccgcgacgccgacgtggtgttcgtgccgttcttcgcgtccctcagctacaatcgccactccagggttgtgcctccggagaaggtgagcagggacaaggaattgcaggagaagctggtcaggtacctgatggcgcagccggagtggaagaggtcgggtggcgccgaccatgtcattgtcgcacaccacccgaatagtttgctccatgcccggtcagtgctgttccccgtggtgttcgtgctgtctgacttcgggagataccatcctagagtagccagcttggagaaggatgtcattgccccttacaagcatatggctaagacgtttgtgaatgactccgccgggtttgatgaccggccgacattgttatacttccggggagcaattttcaggaaggaggtaacacgattaataactatgcttgctcattcaatctctacaaatgaagttcatactctctgaggtgttaatataacataatgttgacagcgatgtagtgtttagtttctttgctttccttaagtattatattttcattgcaactgctatctaaagtaacaagaactcatcttttgtgccaaggaaaggcttgtagccaaattagacaacaaaccttgagaacttccagggtatagaatgtgtgtttgcaattagttgtttatggtaaattgttgataaagtgtttgtttagctccttttttcccttcaatgatactcttgtgtatgttgttggtcactggggtagtaactgatcaagcacacgtcgtgtctacctgtatcttcctaaattgtatcaaaggcatgcatccctcctgcatgttccctcaaaaagaaaaaaagaatgagaatttgggcaggataggttaatagagggtgggctaactgcttcaagtcaaatggagcttgttggaactgcaagcttttgtctagggctcaaggtagacaagagtagttctgtttgctcaaagtgcagaaatcatgacccattaatgactttggaataaccgaataaatattgctttgactgcaccggtgcagaactcatgattatcaacttcttattgagtatatgactacactagtactctctgatattccaaagatcagcaaattaacaggtgttccaaataaatgatttgtcaaaagtttctgtcaagttagacaagagtagttctgtttgttcaaagttcagtgcttatgatcctttcataaatttggactaagatacgttttgactgcactggtacagaactcatgatctatgatccatttatgaacttcttactgagtatgtctacatgtcaatctccaaaatttcaaagtccatcaaattaacagatgttacaacatatgaatcatcaaaagtttgaatgccgacatatcagcagatgttccctgtttcagccatctggcatcaaataaatttactgtgtcaaaactttttttttgtcagctggatgtgtatccttctttaaaagttaatgttgatacatgtagactttaggttattagtttatctatattatctatatgctacaaaactagcgattcatggactaataaattgcatcatttttgttcagggagggaacattaggcaggagctatattatatgctcaaagatgaaaaggatgtttattttgcctttggaagtgtccaggaccatggggccagtaaagccagtaagggaatgcacgcatcaaaattttgcctaaacattgcaggggacaccccttcttccaatcgcctgtttgacgctatagtaagtcattgcgtccctgttatcatcagtgacgacatcgagcttccttatgaagatgcattggactattcgaagttttctatctttgttcgctcatctgatgctgtaaaaaagggttacttgatgaggctgattagaggagtaagcaagcatcaatggacaaggatgtggaataggctgaaagaagtggataaacattttgagtatcaatacccatcacagaaggatgatgcggtccaaatgatctggcaagcattggctagaaaggtgccagcaatccgcctgaagtcacataggtctagaagattttctagatatgatagaggaaaataaacatggagaagatccattagtctagaagattttcaagatctggcacaggaagaaaataaacaggaaggcggtgtatgcatgttatctagggccttggctaatctaactagcatttcactgacacatccgttgcacacgtctcatggtttcatgaacataatcggacagattagcaaggaacagtgagatgtaaagatatcaggttaattgttggctcatagcttaggttaggctgtccaaccgaagtgtatactggcaggcaaaagattgttgattttgtaacatatactcttaaaagtaaattaaaagagggtggcaaagttctttttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0124400, RefSeq:Os12g0124400