BGIOSGA024508

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Revision as of 06:14, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024508| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024508, complete gene.| tag = OsI_255...")
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Gene Name

BGIOSGA024508

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024508, complete gene.

LocusTag

OsI_25563

Ensembl Transcript ID

BGIOSGA024508-TA

Ensembl Protein ID

BGIOSGA024508-PA

Length

2995

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:9002688..9005682

Sequence Coding Region

9005449..9005682,9005200..9005262),complement(9004586..9004684,9004437..9004502),complement(9003663..9003735
,9003500..9003586),complement(9002688..9003427

Genome Context

<gbrowseImage1> name=IndicaChromosome07:9002688..9005682 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:9002688..9005682 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCCCGCGCCGGCCGCCTCGCTCTCCCAGGGCGCGGCGCGCGCGCCTCCGCTCCCCGCCCCACCTGGCTTCGTCCGGCCCCGCCGCCCGCGGCCATGCCACCGACCCCGACTTCTCGCTCGCCCCGTGGCTCCACGCGCTGGGTTCCCTCGGTGAGGGTGGAGTGGAGGCGGTGACCGGATCAGACATTCCGTGTTTGGTTTTGCGTTTTCGGTTGCTCATCGTGGCGTGGGTGGTCGGCGTGGTGACGTCGTGCGCGCCGAACAGGCTCGGTGATCTCTTCCTTTCTCTCAAGGATCCAAGTGGTACGGTTGGTGCTTCAGTTCACCAGAAAGTATTTACAAAGGAGGATAACATGGTTGTATCTGTAGGGTCTTGCATTGTTCTGAAAAATGTAGCTGTTTTCCGTCCATCTCACAAGGGTTGCTATCTTAATGTCACCAAAGAAAATCTAGAGATGCTTGTGCCAAAGGACTTCTGCTTCCCATCTAAGCAAGTGTTTTCATCAAGTCCTTCTGAAAGTCAACATCCTGTAAAGTGTCAAGAAACACGGGATTCTTCATGCCAAGGAGATAACCGCATCAGGAAAACTGGAGTTGAAACATACGGACAAACAACAGGAAATGCTGTTCGAGATAGTACGTTAAGAATGGACAATGGCAGTACTCAAGGTGTAGGAAATCACCTAGATACAAGGATGAAGGAAAAAGATATAAATCCTTCAAACAAGAATACACCAAGCTACAGTGCCGATCAGCAATTCCAAAAAACTAGTTGCAGTTCAGGTAAGCACCAAGGGATTGAACTACAAACATTGATGCAGCGCCTCAGCAGCAGGCATATATCAAACCACAATGGTGAAGAGCATCACCAGCAAACTTTGAATGATCCTGAAAACCCAAACACAAGATGTTCCCAGTCTACTCTAGGTGGATGCTCCGTCATGTCTAGAACGGGAAATTCTATTGCAGCTAGTTCTGATGAAAAGCTGAGTCGACCTCTTGAAGGTGAACGGGTGCACCCTAATAGCAAAAAGCAAAGGGGTGATGCGGTATTGCCAGATAATGTTATGTCAAGTACGAATATTGAGACCTATGGGTTAGCCAATAATCTAAACATTGGTCTGGATGATGTCGCACATCTTGTTGAGCACGCTTCAATCAAAAAACCCAATGAGCATCAGCAAAAGGACTTCATTACTGGAACTTTGGGCATTGTCCTGCCAACTCAAGAAAATAGCTCTGTAAGTAACAGTGATGCAACTACTCTCAGTGCATCGTTGCATTCACAGCCAAATAAGATGGCTTCTGTAACTGAATGGACAGATGATCAGCTATCTGAACTGTTTGCTGACTATTAG</cdnaseq>

Protein Sequence

<aaseq>MTPRRPPRSPRARRARLRSPPHLASSGPAARGHATDPDFSLAPWLHALGSLGEGGVEAVTGSDIPCLVLRFRLLIVAWVVGVVTSCAPNRLGDLFLSLKDPSGTVGASVHQKVFTKEDNMVVSVGSCIVLKNVAVFRPSHKGCYLNVTKENLEMLVPKDFCFPSKQVFSSSPSESQHPVKCQETRDSSCQGDNRIRKTGVETYGQTTGNAVRDSTLRMDNGSTQGVGNHLDTRMKEKDINPSNKNTPSYSADQQFQKTSCSSGKHQGIELQTLMQRLSSRHISNHNGEEHHQQTLNDPENPNTRCSQSTLGGCSVMSRTGNSIAASSDEKLSRPLEGERVHPNSKKQRGDAVLPDNVMSSTNIETYGLANNLNIGLDDVAHLVEHASIKKPNEHQQKDFITGTLGIVLPTQENSSVSNSDATTLSASLHSQPNKMASVTEWTDDQLSELFADY</aaseq>

Gene Sequence

<dnaseqindica>1..234#421..483#999..1097#1181..1246#1948..2020#2097..2183#2256..2995#ATGACCCCGCGCCGGCCGCCTCGCTCTCCCAGGGCGCGGCGCGCGCGCCTCCGCTCCCCGCCCCACCTGGCTTCGTCCGGCCCCGCCGCCCGCGGCCATGCCACCGACCCCGACTTCTCGCTCGCCCCGTGGCTCCACGCGCTGGGTTCCCTCGGTGAGGGTGGAGTGGAGGCGGTGACCGGATCAGACATTCCGTGTTTGGTTTTGCGTTTTCGGTTGCTCATCGTGGCGTGGGTATGCAGGCGAGGCGCGCGCGTGGAAGCGGCAGGAGATCGCGGCCATCCGTGGCGACCGGGCATTGTATCGAGCACGTCTGGTGCGTGCGGAGTGTGGACATCTCCTGGCTCTACCTGTTTCGCTAGTTTTGTGCGTGTCTTTGCTGATGGCTTGATTGGTCTTGGGGCGTTTGGTTGTGATCAGGTGGTCGGCGTGGTGACGTCGTGCGCGCCGAACAGGCTCGGTGATCTCTTCCTTTCTCTCAAGGTGAGCGAACACAAAGCATCATGGCATGATTATGTGTGTACTGTGGAATGAGTTGGATTCCTTGGCCGTAGGGATGCAAGCGGAGCGGGCAAGCGGGGTTTTTAACCTGCTTATCCCACTTCTAGTTCATTTTTTCTTCTAAATTTTATACTGCCATATGAAAAATGAATTAGCAAGCGGGTTTTTATGCTGGTAGCGGGACTACCCACTTTGCATCCCTACTTGGCCGAGTTATCATGTTCGCGTCATGCGGGAATTAGCTCGTGTTAAAATTGGAAAAAGGGACTTTGGTCTTTGATTGATGTACTGGTTGGTTTTCTTCTGATTACTTATCACCTCTTATTGCATTATCTGCATCTCTTCATGTTTGCATCTTACATGTAGAGTGGGCTACATTAAGAGACATTCAGATAAGTAATTAAACCGAAAGCCATAAATATTACTTTACAATTTGAGTACGGAATATTTATTGAATGCTAACTGATTGGGAAATAATGGTGAGTTATTCTTGATAGGATCCAAGTGGTACGGTTGGTGCTTCAGTTCACCAGAAAGTATTTACAAAGGAGGATAACATGGTTGTATCTGTAGGGTCTTGCATTGTTCTGAAAAATGTAAGGTGTTGTGGTGAAAAAGGATTTCTTTTGTTGGCAAACTAACTTAGTATATGGAGTAATTGGTTCATTGTTAATTTCAGGTAGCTGTTTTCCGTCCATCTCACAAGGGTTGCTATCTTAATGTCACCAAAGAAAATCTAGAGATGGTACTATTTGCATTTCTTTATATTACTATCTAGTATAATAATTGCCATTATTACTATACGTGCACTGCACAGTAGAGTGAAAATAATATAAGATGCACTGATACATAATGTTACGGAAGTAGACAGCTATAATACAATGATACCAGAGCATCAGTAAAGGATGAAAAGAAGGCACTCTGTGAATCTTACTTGTGTAAAGCATCATCATTGTCTTCTGTTTTTCCTTCTCAGTTTTTTGAGTGAAAATGGTAGAGAGGTATCCTACAATTCCATGATCCTGTTGTTTGTTTTATTGCTTCTAAAACTTTCATGAATTTAAAATACACCATTAGTTCAAGATAGCCACATTGTTCATCGATGAAAAAATCATACTTTATTTTACCATTTTAGATCTTCCAAACATTCTTGCACATGTAATTATATAAATCAAAACTTCTGGCTGGGAGGATGTTTGTCCTTCAGATTAACCATCATATTTAGGCCTTTCATGCTTCAGACCTTGTGTTAATCAAGAATAAGCCTTTGCATTATCAGCAGAGTTACTTGGATTCACTTGTATTTCAAGTCTCAGTTCTTTAGAAGCATGTAACCATTTCACAAAACTTTCACAATGGTACTTTTGAACTGCCATTACAATGTTCCTTAAATTAACATCATAATCATTTTAGGACATGGCGGTATGAATGTTTTTATATTTGCAGCTTGTGCCAAAGGACTTCTGCTTCCCATCTAAGCAAGTGTTTTCATCAAGTCCTTCTGAAAGTCAACATCCTGGTAACTTCCAGTTCATATCCCTTTCTCTATATTAATCTCTTAAGAACAATAATATGTTACATGTATTCCATAACAGTAAAGTGTCAAGAAACACGGGATTCTTCATGCCAAGGAGATAACCGCATCAGGAAAACTGGAGTTGAAACATACGGACAAACAACAGGTATCTGCCGCACGATCTTAAGTACCAGGGATGATAGGATTGCTGATGTACTTTCTGATAATAATTATGCAGGAAATGCTGTTCGAGATAGTACGTTAAGAATGGACAATGGCAGTACTCAAGGTGTAGGAAATCACCTAGATACAAGGATGAAGGAAAAAGATATAAATCCTTCAAACAAGAATACACCAAGCTACAGTGCCGATCAGCAATTCCAAAAAACTAGTTGCAGTTCAGGTAAGCACCAAGGGATTGAACTACAAACATTGATGCAGCGCCTCAGCAGCAGGCATATATCAAACCACAATGGTGAAGAGCATCACCAGCAAACTTTGAATGATCCTGAAAACCCAAACACAAGATGTTCCCAGTCTACTCTAGGTGGATGCTCCGTCATGTCTAGAACGGGAAATTCTATTGCAGCTAGTTCTGATGAAAAGCTGAGTCGACCTCTTGAAGGTGAACGGGTGCACCCTAATAGCAAAAAGCAAAGGGGTGATGCGGTATTGCCAGATAATGTTATGTCAAGTACGAATATTGAGACCTATGGGTTAGCCAATAATCTAAACATTGGTCTGGATGATGTCGCACATCTTGTTGAGCACGCTTCAATCAAAAAACCCAATGAGCATCAGCAAAAGGACTTCATTACTGGAACTTTGGGCATTGTCCTGCCAACTCAAGAAAATAGCTCTGTAAGTAACAGTGATGCAACTACTCTCAGTGCATCGTTGCATTCACAGCCAAATAAGATGGCTTCTGTAACTGAATGGACAGATGATCAGCTATCTGAACTGTTTGCTGACTATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024508