Os12g0124700

From RiceWiki
Revision as of 10:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0124700| Description = CDC45-like protein family protein| Version = NM_001072573.1 GI:115487107 GeneID:4351377| Length = 2466 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0124700

Description

CDC45-like protein family protein

Version

NM_001072573.1 GI:115487107 GeneID:4351377

Length

2466 bp

Definition

Oryza sativa Japonica Group Os12g0124700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1188042..1190507

Sequence Coding Region

1188143..1189957

Expression

GEO Profiles:Os12g0124700

Genome Context

<gbrowseImage1> name=NC_008405:1188042..1190507 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1188042..1190507 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcgagagctccgcctcgactccttctacgcgcgcctccacgccgccgccgccgcgtccgccgccgacgcatcctcgccgctcctgatcctcccctccgccgccgacgccgacgccctctgcgcgctcaaggtgctcacccacgtcctctccgccgactccatccgcttctccatctaccccgtcgcgtccgccgccgccgccgcctccctcctcgcctccttctccgcatcccagccgctctgcctcctcctcatcaactggggcgcccaccgcgacctccgcgccgtgctgccccccgccgccaccgcgttcgtcgtggattcgcaccgccccatccacctccacaacctttcggcggccaacgaccgcgtcgtcgtgctcttcaccactgacgacgagcacaccgccgatctctcctacgacttcgacgtctcctccctagccgatgcctccgacctctccgctcagggggaggccgacgaccacctccgcgtcgccgaggaggacgaagattccgatgcttccgactcggattccgacggcgagggtgggaggaggaagaggcggcggctctccgacgatgcggaggcggatggcgacccggagaggctgttcgggaagctgaggagggagtactaccggctcggcaccttccacgggaagccgtcggggtgcctcatgtacgagctcgcccacgcgctgcggaagaacaccaacgagctcctctggttcgcctgcgtctccctcaccgaccagttcgtccacgagcgcatcaccaacgagcgctaccaggccgccgtcatggagctcgagcagcacatcaatggatctggcaatctcgatccatctggcgtgggcgcggtggtgacgctcaaggatggcaccaagatccgggcgccggaggcctcacgcatcgcctatgaagacgagccgcggctgatgctgctccgggagtggagtctgttcgactccatgctctgctcgtcgtatgtcgcgacgaagctcaagacctggagcgacaatggcctcaagaagctgaagctgcttctggcaaggatgggattcccgctcgccgactgccagaagaggttccagtacatgagcatggaggtcaagcggaagatgcgtgatgagtttgatcggttcttgcctgagtatgggctcaccgagttctattatcggagtttcttgagggtgcatgggtaccgctccaaggtttctgctgcagatgttgtttatggcgtcacagctttgcttgaatcactgaatgctgagtccaaggactccaaggggtcttctgctgctgagcaattctgggttgcatactctgcattgtcgctgagcaatgtcgatcagctgcggaaagggatgcagtctgcaattgagatacagagggcaatactgaggcaaggaagctcagcgattaccaagaccgggttcattcggagtgcaaagaagtttcggtgggtgaagcttgatgatccagtggatacagataagttatgccaacctcaggctcttaccaaattctgctttttcctaatggacgcactgagagagcgaggagcaaggatgaagccacttatctgcgcttgcttagcaagggagcctgagaaagtgcttgttgtgggggtatgtgggaagccaaggctgggggctgttaaggggaatgcatttggtaatgcatttaggtcagctgccgaggagattggtgcagactatttccatgacatgtttgagtcatcatggattgttctcgatgttgttgctgtcagctctttcatgattcggttaacagagaagctatga</cdnaseq>

Protein Sequence

<aaseq>MVRELRLDSFYARLHAAAAASAADASSPLLILPSAADADALCAL KVLTHVLSADSIRFSIYPVASAAAAASLLASFSASQPLCLLLINWGAHRDLRAVLPPA ATAFVVDSHRPIHLHNLSAANDRVVVLFTTDDEHTADLSYDFDVSSLADASDLSAQGE ADDHLRVAEEDEDSDASDSDSDGEGGRRKRRRLSDDAEADGDPERLFGKLRREYYRLG TFHGKPSGCLMYELAHALRKNTNELLWFACVSLTDQFVHERITNERYQAAVMELEQHI NGSGNLDPSGVGAVVTLKDGTKIRAPEASRIAYEDEPRLMLLREWSLFDSMLCSSYVA TKLKTWSDNGLKKLKLLLARMGFPLADCQKRFQYMSMEVKRKMRDEFDRFLPEYGLTE FYYRSFLRVHGYRSKVSAADVVYGVTALLESLNAESKDSKGSSAAEQFWVAYSALSLS NVDQLRKGMQSAIEIQRAILRQGSSAITKTGFIRSAKKFRWVKLDDPVDTDKLCQPQA LTKFCFFLMDALRERGARMKPLICACLAREPEKVLVVGVCGKPRLGAVKGNAFGNAFR SAAEEIGADYFHDMFESSWIVLDVVAVSSFMIRLTEKL</aaseq>

Gene Sequence

<dnaseqindica>102..1916#atttcatcctcttcttcttcgtccccttctccatctccaaattccaacccattcctcccagatccccaatcctccaattcaccacttcgattgatgcgccaatggtgcgagagctccgcctcgactccttctacgcgcgcctccacgccgccgccgccgcgtccgccgccgacgcatcctcgccgctcctgatcctcccctccgccgccgacgccgacgccctctgcgcgctcaaggtgctcacccacgtcctctccgccgactccatccgcttctccatctaccccgtcgcgtccgccgccgccgccgcctccctcctcgcctccttctccgcatcccagccgctctgcctcctcctcatcaactggggcgcccaccgcgacctccgcgccgtgctgccccccgccgccaccgcgttcgtcgtggattcgcaccgccccatccacctccacaacctttcggcggccaacgaccgcgtcgtcgtgctcttcaccactgacgacgagcacaccgccgatctctcctacgacttcgacgtctcctccctagccgatgcctccgacctctccgctcagggggaggccgacgaccacctccgcgtcgccgaggaggacgaagattccgatgcttccgactcggattccgacggcgagggtgggaggaggaagaggcggcggctctccgacgatgcggaggcggatggcgacccggagaggctgttcgggaagctgaggagggagtactaccggctcggcaccttccacgggaagccgtcggggtgcctcatgtacgagctcgcccacgcgctgcggaagaacaccaacgagctcctctggttcgcctgcgtctccctcaccgaccagttcgtccacgagcgcatcaccaacgagcgctaccaggccgccgtcatggagctcgagcagcacatcaatggatctggcaatctcgatccatctggcgtgggcgcggtggtgacgctcaaggatggcaccaagatccgggcgccggaggcctcacgcatcgcctatgaagacgagccgcggctgatgctgctccgggagtggagtctgttcgactccatgctctgctcgtcgtatgtcgcgacgaagctcaagacctggagcgacaatggcctcaagaagctgaagctgcttctggcaaggatgggattcccgctcgccgactgccagaagaggttccagtacatgagcatggaggtcaagcggaagatgcgtgatgagtttgatcggttcttgcctgagtatgggctcaccgagttctattatcggagtttcttgagggtgcatgggtaccgctccaaggtttctgctgcagatgttgtttatggcgtcacagctttgcttgaatcactgaatgctgagtccaaggactccaaggggtcttctgctgctgagcaattctgggttgcatactctgcattgtcgctgagcaatgtcgatcagctgcggaaagggatgcagtctgcaattgagatacagagggcaatactgaggcaaggaagctcagcgattaccaagaccgggttcattcggagtgcaaagaagtttcggtgggtgaagcttgatgatccagtggatacagataagttatgccaacctcaggctcttaccaaattctgctttttcctaatggacgcactgagagagcgaggagcaaggatgaagccacttatctgcgcttgcttagcaagggagcctgagaaagtgcttgttgtgggggtatgtgggaagccaaggctgggggctgttaaggggaatgcatttggtaatgcatttaggtcagctgccgaggagattggtgcagactatttccatgacatgtttgagtcatcatggattgttctcgatgttgttgctgtcagctctttcatgattcggttaacagagaagctatgatgacatgtgcttgtctagcgctaatgattctttcagttcccatgaagatgggagcttgaggcttgattccttgattaaacactctaaaataaaggagcttgagggctggtggagtggtagatcgatctggtggtacatggcatgttctattttcctcatcaccccacatgatcttcactcagttagggatagcagcctggcaaaaattgcttgattttcagagtttacttgttcaacggctgtgttttatgtgttactgaagggaagattgtttgctgagtgtaactgctccattattagcaaatgatagatcaatagattcagatggaaacctgattctaacacacaaggggcaaggtatatttgcttgctgattttcatactagatagatggaatcgatgcttgtatttgtattcccataagcttgcagtttctattgtagggtagtgttgtaatcaatcttgtaccattgcagttacttgatatttttagtgtaactgataagtgtcttccttgttattttttgtgcagtcatcataacttcagacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0124700, RefSeq:Os12g0124700