BGIOSGA024540

From RiceWiki
Revision as of 06:14, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024540| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024540, complete gene.| tag = OsI_254...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024540

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024540, complete gene.

LocusTag

OsI_25494

Ensembl Transcript ID

BGIOSGA024540-TA

Ensembl Protein ID

BGIOSGA024540-PA

Length

4571

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7995391..7999961

Sequence Coding Region

7999806..7999961,7999171..7999344),complement(7998963..7999055,7998791..7998874),complement(7998641..7998696
,7998281..7998374),complement(7997874..7997986,7997458..7997530),complement(7997217..7997297
,7997046..7997132),complement(7996864..7996968,7996130..7996236),complement(7995996..7996056
,7995391..7995492

Genome Context

<gbrowseImage1> name=IndicaChromosome07:7995391..7999961 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:7995391..7999961 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCTGCTCGTGGGCCGCCACCACGGCGGCGGCGGCGCCCCCCCGCCCGCCCGCCAGGTGCCGCTCGCGCGTCGCCGCGCTCCGCCGCACGGCCGCCGCCTCCGCCGCCGCCGCCACCTGCGTCCTCGCCGAAGCGCCCAAGGGGCTCAAGGTGCCTGTTGGGGGATGTTACAGGCTGATCGATATCCCGATGAGCAACTGCATAAACAGCAAGATCAACAAGATCTACGTTCTCACCCAGTTCAACTCCCAGTCTCTCAACCGTCACATCGCGCGCACTTATAACATTGGCGAGGGGGTTGGATTTGGTGATGGCTTTGTGGAGGTGCTGGCAGCTACCCAGACAACAGGGGAATCAGGAAAGCGATGGTTCCAGGGAACAGCCGATGCTGTCAGGCAGTTCCTGTGGCTATTTGAGGATGCAAGGCTCAAACGCATAGAGAACATACTAATTCTATCTGGTGATCATCTGTATAGGATGGATTATATGGACTTTGTCCAGAAGCATGTTGACAAAGGTGCTGATATTTCAGTCGCTTTTGTTCCTGTGGATGAGAGTCGAGCTTCTGATTTTGGATTGATGAAGACTGACAAGAATGGACGCATTACTGATTTTCTCGAAAAGCCCAAGGATGAAAGCTTGAAATCAATGCAACTAGATATGGGAACTTTTGGTTTGCGCCCAGAAGTTGCAGATACATGCAAATACATGGCTTCAATGGGAATATATGTATTCAGGACTGATATCTTGTTAAGACTTCTAAGAGGACATTATCCTACAGCGAATGATTTTGGGTCAGAAGTTATCCCAATGGCTGCAAAAGACTACAATGTGCAGGCCTATCTATTTGATGGTTACTGGGAAGATATTGGGACAATAAAGTCATTCTTTGAGGCAAATCTTGCTCTCACAGATCAGTCGCCAAACTTCTATTTTTATGATCCTGTGAAGCCCATATTCACATCTCCTAGATTTTTACCTCCAACGAAAGTAGAAAACTGCAAGGTTCTGAACTCTATAGTTTCCCATGGGTGCTTTCTAACAGAATGTAGTGTTGATCGCTCTGTTATTGGTGTCCGTTCAAGATTAGAACCGGGGGTGCAGCTGAAGGACACCATGATGATGGGGGCAGATTACTATCAGACTGAAGCTGAGAGATTTTCTGAATTGTCTGATGGAAAAGTACCAGTTGGCGTTGGAGAAAACACCATAATAAGGAACTGTATCATCGACAAGAATGCTCGAATTGGAAAGAATGTAATGATTATGAACTCACAGAATGTGCAAGAAGCAGAGAGACCATTAGAGGGTTTCTACATTCGTTCTGGGATAACGGTAGTGCTTAAAAATGCGGTGATTCCAGATGGTACAGTTATCTAG</cdnaseq>

Protein Sequence

<aaseq>MATCSWAATTAAAAPPRPPARCRSRVAALRRTAAASAAAATCVLAEAPKGLKVPVGGCYRLIDIPMSNCINSKINKIYVLTQFNSQSLNRHIARTYNIGEGVGFGDGFVEVLAATQTTGESGKRWFQGTADAVRQFLWLFEDARLKRIENILILSGDHLYRMDYMDFVQKHVDKGADISVAFVPVDESRASDFGLMKTDKNGRITDFLEKPKDESLKSMQLDMGTFGLRPEVADTCKYMASMGIYVFRTDILLRLLRGHYPTANDFGSEVIPMAAKDYNVQAYLFDGYWEDIGTIKSFFEANLALTDQSPNFYFYDPVKPIFTSPRFLPPTKVENCKVLNSIVSHGCFLTECSVDRSVIGVRSRLEPGVQLKDTMMMGADYYQTEAERFSELSDGKVPVGVGENTIIRNCIIDKNARIGKNVMIMNSQNVQEAERPLEGFYIRSGITVVLKNAVIPDGTVI</aaseq>

Gene Sequence

<dnaseqindica>1..156#618..791#907..999#1088..1171#1266..1321#1588..1681#1976..2088#2432..2504#2665..2745#2830..2916#2994..3098#3726..3832#3906..3966#4470..4571#ATGGCGACCTGCTCGTGGGCCGCCACCACGGCGGCGGCGGCGCCCCCCCGCCCGCCCGCCAGGTGCCGCTCGCGCGTCGCCGCGCTCCGCCGCACGGCCGCCGCCTCCGCCGCCGCCGCCACCTGCGTCCTCGCCGAAGCGCCCAAGGGGCTCAAGGTAGGTGGCTGGCTAGCTCCGTGTTCGCGCGTGCGCGCGTGCGTGCGTGTTGGGATTGCGTGAGCTGATCTCCTGTGCGTTGGGTGCGGATTCATTGGTTTGCTTTTGCTGTTTTGGTGTGCCAAGGTGGAGCAGGCGGATGCGGTCGAGCCGGCGGCGGCGGCGGCGGCGCGGAGGGACGTGGGGCCGGACACGGTGGCGTCCATCATCCTGCGGCGGCGGCGCCGGCACGCGCCTCTTCCCTCTCACGCGGACCAGGGCCAAGCCCGCGGTAATCCAATCACATTATCCTTTCTTTACAGTGTTTACACGCACATTTCGTCATGCATTTGATAAGCATTTCATTGGTTGTGTGCAATAGTGGGGATTTCGGTTGCTGTTGACACCATTGACTATTGGTTGATTGAATCGTGAGATGCTTACATCATTAGTGATTGAGCTGTATGTTCTTGGTACGTCAGGTGCCTGTTGGGGGATGTTACAGGCTGATCGATATCCCGATGAGCAACTGCATAAACAGCAAGATCAACAAGATCTACGTTCTCACCCAGTTCAACTCCCAGTCTCTCAACCGTCACATCGCGCGCACTTATAACATTGGCGAGGGGGTTGGATTTGGTGATGGCTTTGTGGAGGTAAGATTAGTGTTTGTTATGAGGTGAAATCTAGTGGAAACATGCAGCTGTGGCAATGGGTCGGTGATCTCTAATTGATAATGTTCTACGGTGGTTTGTTTTGATTGTTGGGTAGGTGCTGGCAGCTACCCAGACAACAGGGGAATCAGGAAAGCGATGGTTCCAGGGAACAGCCGATGCTGTCAGGCAGTTCCTGTGGCTATTTGAGGTTTGTCTAGTGTCATCTCATGATATTGTACTCTTATCACGGGATGTTATCGCTTTCCCAGTTTTAACTTGCCTGATTTTTTTACAAGGATGCAAGGCTCAAACGCATAGAGAACATACTAATTCTATCTGGTGATCATCTGTATAGGATGGATTATATGGACTTTGTCCAGGTGAACTTCATGTTGATATTCTAGAGCAAAGATTATTTTTGCACTTTATTTGAGTACTGTAAAAAAAAAATCTAAATGACGAGTTGTTTTGCAGAAGCATGTTGACAAAGGTGCTGATATTTCAGTCGCTTTTGTTCCTGTGGATGAGAGGTTATTCATAATTGCCCTATCTGAATCGTTTTCTTTTTTTTAATCTGTCTTTATTCTAGCTAGTTAGCCGTACATGTTGTAATTCTTCACAGTTTTAGAAGTTTACTTTTTGTCACGCTAATCATCAATATTACTTGTGAATATCATAATATTGTATTGCAAATTAACAAGTAGACAATACACGTGGATTTCCATATTTAATTGATGGGTCAGATGATGACATACACCTCTCATATTTTTTTAAAATTTGTGTCATCTACTTGCAGTCGAGCTTCTGATTTTGGATTGATGAAGACTGACAAGAATGGACGCATTACTGATTTTCTCGAAAAGCCCAAGGATGAAAGCTTGAAATCAATGGTATATGCCTCTTCACTGAATCAAAGACAAATGAATACTAAAAATTATTTGTTTACACATGTTTAAACTGAATTGTTACCTGAAAAAGGTGCAAAATGAATGCATTCCATCACCTTTAATTGCATATGTTAAATCATCCACGGTTTTATTCACAAGGCTTTTGTTTTGCTTTTGTGAATGTTATCTAGATTATTGGAGATTTGTTCTTTATTTCTTTATCATTAGCTCAATTTCCTTGATTTATTGGCTCTAACGAATAAGTTTTTAAATAATCTAAGATATTTATTAATGCAGCAACTAGATATGGGAACTTTTGGTTTGCGCCCAGAAGTTGCAGATACATGCAAATACATGGCTTCAATGGGAATATATGTATTCAGGACTGATATCTTGTTAAGACTTCTAAGGTAAATGCTAATGATTAAGACTAAGGTAAATTCTAACGATAATATCTCATGAGCAATGCTTTCCTTAATCTTGGAAACTAGGTTTGCATGATAAATAAATGTTCCAGTTGCATTGTAGTTTTATCTTCTATATCAAGCATTTAGTTTCTGTAACTTTATTTTCTGATGCATGGCAAAGTCAAATGTGCAAAAATAACAAATGGTTTGTTATATATGATAAGACATACCGTTGGTTTTATTTGCTGAGATAGCATTCCTGGGATTGTCTGCACTCCTTGGTTCTTATTTTTCTTGCCAGTTTGAGGTATGCTGATACTCTTTCTCTTTGTTCTGTATCTTTTAGAGGACATTATCCTACAGCGAATGATTTTGGGTCAGAAGTTATCCCAATGGCTGCAAAAGACTACAATGTGCAGGTATTTACAACTTCATAATCCTTCAAACTGTATGTACGCAAGAAATTCCATTGTCATAAATCAACCGTTAGAAATTCTTCAAATCCCAAAATGAGCATGTGATCTTACTTTTCACAAAACCCTGAATATGAATGCAATATTCCTTGTTCTGTGGTGACAGGCCTATCTATTTGATGGTTACTGGGAAGATATTGGGACAATAAAGTCATTCTTTGAGGCAAATCTTGCTCTCACAGATCAGGTTTACTTTTTTAGTTAACATCATCTCCATCTATATCTTTATGTGCGTGGACAATTTATCTAAATTCAGTTATCTTCTTTGTAGTCGCCAAACTTCTATTTTTATGATCCTGTGAAGCCCATATTCACATCTCCTAGATTTTTACCTCCAACGAAAGTAGAAAACTGCAAGGTCAGATTCTCTTAGAGATGGTTTCTTTGGTTATACCTTCAGTAGCAGCTTTTTTTGATCTAACCATTTACGTGCAGGTTCTGAACTCTATAGTTTCCCATGGGTGCTTTCTAACAGAATGTAGTGTTGATCGCTCTGTTATTGGTGTCCGTTCAAGATTAGAACCGGGGGTGCAGCTGAAGGTGAATTGTTGAATACTCATAATTCAATGTACTTGACAGTTATTTGGAACTCATAAGTTTGCCATTCAAATAATTGAGGCAGAGATGGATGAAAGCATACCAATACAGAATCTTAGGAACTAAGCCTGCACGAACAATCTTCGGAAATTGTATTTAAAGAGAAAATACTGTTTCCCAAATCCCAATGCTAGATAAACCAGAGATAAATTAGTCTTTTTTCTAATATTTTGGCCATTTGGATACAATCCATTTATTTTAGCTTCTATTAACATTAACATTATTAGAACCACAGGAAACAGGTTGCAAGTTCCATTTATTTTCCCTTGATCACAGTGTTCTCTTTTTTTCTTCAATACCTGCATTTACTGCAGTCTCGCCATGTCCTATTGATGCCATGCGAGTTTTTTCCCCTAGTTTTGTTGGCATTTATGCCCTTAACCATGAAAGATTTGCACATAGTTTTTAAACCACAGAAAGTACATTTAGTCATACCAACTTATGCTGAAGCAATCACTAAGTACCCTACATGTTGGTAATGGTCTAATGGATTTTTTTTTCATTTTTATTGAACAATGGATGTTTAATTATTTCAATATCGTTAACAAAAAGAAAATCAACTGGGTATAGGACACCATGATGATGGGGGCAGATTACTATCAGACTGAAGCTGAGAGATTTTCTGAATTGTCTGATGGAAAAGTACCAGTTGGCGTTGGAGAAAACACCATAATAAGGTCAGTATGAGCAATGATGCATATATGTATTTGGTAACTTGCCTGTTATGTAATGCTAAGTTTTGACATACAGGAACTGTATCATCGACAAGAATGCTCGAATTGGAAAGAATGTAATGATTATGAACTCACAGGTATGACCCCCATGCATAAGACTATTTCTTAGTATCATTGTCTAGGAGAGCCTTCTGGATTCTTCTTTGCAATGATCTTTATAACATTTGCAAGCTCATTTCCACAACCGTTTAGTGAAGATAAGATGACTCCATTAAATTCATTCACTTCATTGAGCATGTTGGTTTTATGGAATTCGAAATTTGTAACAAGTATGTATCGCAGGAGCAAGGAAAAAATGCACTTTTTGGAAAGGTAGCAAAGTATGTATTAGTGTTAATGTCTACTTAGAGAAAAAAAAAGCCTCATATCTCCTTAGATAAGAATGGTGGGAGGAAAATTCATTCAATCTACTAAAGCGCTCTTTCAACCTATTTGGCCTTCATTGCACATAGTTCATCGTAGCAGCTTTTGCAACTTGCTTGTCTATGCTATTAAATATATATGCAGTTTTTCTTTAGTCATTAAGTTTACAGTTCAAATGCTGAGACCTAAGAGTTTTCCCTTGCTTGTGTGAATGCAGAATGTGCAAGAAGCAGAGAGACCATTAGAGGGTTTCTACATTCGTTCTGGGATAACGGTAGTGCTTAAAAATGCGGTGATTCCAGATGGTACAGTTATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024540