BGIOSGA024575

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Revision as of 06:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024575| Description = 40S ribosomal protein S12| Definition = Oryza sativa Indica Group BGIOSGA024575, complete gene.| tag = OSJNBA0016A21....")
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Gene Name

BGIOSGA024575

Description

40S ribosomal protein S12

Definition

Oryza sativa Indica Group BGIOSGA024575, complete gene.

LocusTag

OSJNBA0016A21.128-2

Ensembl Transcript ID

BGIOSGA024575-TA

Ensembl Protein ID

BGIOSGA024575-PA

Length

1627

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7306820..7308446

Sequence Coding Region

7308442..7308446,7307299..7307584),complement(7306972..7307037,7306820..7306879

Genome Context

<gbrowseImage1> name=IndicaChromosome07:7306820..7308446 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:7306820..7308446 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAAGAGACTCCAGTTGAGGCCCCACCTGCCCCTGTTCTTGGAGAGCCGATGGACCTGATGACTGCTCTGCAGCTTGTGATGAAGAAGTCAAGCGCTCATGATGGGCTCGTGAAGGGGCTCCGTGAGGCGGCCAAGGCCATTGAGAAGCATGCCGCTCAGCTTTGCGTGCTTGCTGAGGACTGTGACCAGCCTGATTATGTCAAGTTGGTCAAGGCACTCTGCGCTGAGCACAGTGTTCACCTCGTTACCGTGCCTAGTGCTAAAACTCTTGGCGAGTGGGCAGGGCTTTGCAAGATTGATTCTGAGGGCAAGGCGAGGAAGGTCGTAGGCTGCTCCTGCGTCGTTGTCAAGGACTTCGGTGAAGAGTCAGAGGGCCTCAACATAGTCCAGGACTATGTCAAGTCCCACTAG</cdnaseq>

Protein Sequence

<aaseq>MAEETPVEAPPAPVLGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHSVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESEGLNIVQDYVKSH</aaseq>

Gene Sequence

<dnaseqindica>1..5#863..1148#1410..1475#1568..1627#ATGGCGTAAGTTTCCCCCCGCACCAAAATCTGGGCGCCCCCGCTCGCTTCATGGTTGATTTGTGTTTTTTTTTTCGTTCTGTTGGTCTGGCTGCTGATGGATGGCGTATGAGAAATCGCTGTGCTCCTAGCGGTTTTGCGCGATCATGCCCTTGATGTTCGTGTTCTGTTTTTTGTTATGGAATTGTGAGGGTTGCGGCTTGTTTTGACTTCTTGATTCAAGAACGCGGCGAGTCGTCAGCTTGTCTGTAATGTTGGTGATTGGAAAACTGTCAGTGGCTCGTATTTTAGTGAAAGCTTGAGCTGTCATGGATGGGATTGAAATTTATGCTTTAGGAGTTCTTTAGTTATGCCTGTAATATAGTTTTGCAAGCAGATTTCTGGTTCATACCCAGAGAAAAAATAAACTTCTGGGACGAATCTAGACATGTGCTTGTCCAGATTCATTTCCAGAAGTTGTTCTTTTGGGGGGAACGGAGGGTGTACATGGTAACATTAAGCAGATAGAACATACGGCCAGATAGAAAGAAGGCTTAATGCTTGCTGAATTAGTTTTTGTTCGTTAACCGAGTTGTTCTGGGTGAGTGGGGGCATATAATTAGTTTTCTTTTATACATTTGTCCTCGAATTGTTTTGTTTTGCTTGAATTCGGAAAAACCTAGCTTTGCGCACATCATTGCTAATACAGTGGGCAATGTGACTTGAGCTTATGTTGCTTATGTTTACTCAACTATTTTGAGAGTGCAGCACCATATATTGTCAAACTACTTGGAACTCAATTATCTAAAGAGCATTTCCAGTAGAACAAAACTAAAAGGAAAACATGTTGCTACCTTGTTTACTAAGATTAAGCATCCATGCAGGGAAGAGACTCCAGTTGAGGCCCCACCTGCCCCTGTTCTTGGAGAGCCGATGGACCTGATGACTGCTCTGCAGCTTGTGATGAAGAAGTCAAGCGCTCATGATGGGCTCGTGAAGGGGCTCCGTGAGGCGGCCAAGGCCATTGAGAAGCATGCCGCTCAGCTTTGCGTGCTTGCTGAGGACTGTGACCAGCCTGATTATGTCAAGTTGGTCAAGGCACTCTGCGCTGAGCACAGTGTTCACCTCGTTACCGTGCCTAGTGCTAAAACTCTTGGCGAGTGGGCAGGGGTGAGATACATTACTCTTCTATTAGCTGTACCTTGTCAATTGTTATACTGTGTTAATCTGATGTCTAGGCTGCCGGATAAGATTTTTTGATTTAGCCTTCTGCTAATGACTACAGTTTTAGCAGCTCAATGTAAAATGTGCTATTTAATTTTGTAATCCTTTATCTAAATTTTAATTTCATTTTGTTGTTGATATTGTTCTGCATCTCTCCTTTCTGCATATCTTCTGATTTAACAATATCACAACAAACGTTGTTTGCAGCTTTGCAAGATTGATTCTGAGGGCAAGGCGAGGAAGGTCGTAGGCTGCTCCTGCGTCGTTGTCAAGGTAGATAATTGATTACCCACCATACTACTTCAAATATCTTTTTGCCATCTTCGGCATTTGGTAATGTTGGCTTGTTCTTTCTCATTTACCAGGACTTCGGTGAAGAGTCAGAGGGCCTCAACATAGTCCAGGACTATGTCAAGTCCCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024575