BGIOSGA024617

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Revision as of 06:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024617| Description = cDNA clone:J013035L06, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA024617, complete gene.| ta...")
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Gene Name

BGIOSGA024617

Description

cDNA clone:J013035L06, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA024617, complete gene.

LocusTag

OJ1664_D08.103-1

Ensembl Transcript ID

BGIOSGA024617-TA

Ensembl Protein ID

BGIOSGA024617-PA

Length

7030

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:6219490..6226519

Sequence Coding Region

6226259..6226519,6224510..6224586),complement(6223724..6223829,6223109..6223201),complement(6221956..6222021
,6221608..6221753),complement(6220669..6220777,6219722..6219786),complement(6219490..6219637

Genome Context

<gbrowseImage1> name=IndicaChromosome07:6219490..6226519 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:6219490..6226519 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACATCCTCCCCCTCCTGGTTCTCCGGCATCGCCCGCGCCTCCTCCGCCATGCCCCCCGGCGGCGTCGCCTCCGCGGCCGCTCCCCTCTCCGATGGCGCGGGTGGGAGGGGCGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGAGTGGTCGCCGCCGTGGTTGCTGCGGGGCCTGGCGCTGGTGCTGGCGTTGGCGCGGGCGGGAAGAGGAGGCAGGTGCAGGGGGCGCTGTTCAAGTACGGCCCCAAGTCCGCCCAGGTCGCATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTTGACGGATGGGTTTTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGAGAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAGCTTAGAGCAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAATTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACATGCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAGTGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAAAATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCCGATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAGCTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTGCCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACTTGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAACCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAGAGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MTSSPSWFSGIARASSAMPPGGVASAAAPLSDGAGGRGGGGGGGGGGGGVVAAVVAAGPGAGAGVGAGGKRRQVQGALFKYGPKSAQVAFKTGDFNHQVIFIGGLTDGFLATDYLEPLSLALEVEKWSLVQPLLSSSYTGYGISSLEQDALELDQLISYLINKENSDGVILLGHSTGCQDIVHYMRTNFACSKAVSGVILQAPVSDREYRATLPETAEMIDLAAKMLSEGRGMDLMPREANPDAPITAYRYHSLCAYMGDDDMFSSDLSEDQLRQRLGHMSTTQCQVIFSMGDEYVPEYVDKEALVDRLCRALGNAEKVEIEWGNHALSNRVQEAVRAIVDFVKREGPKGWDDPWS</aaseq>

Gene Sequence

<dnaseqindica>1..261#1934..2010#2691..2796#3319..3411#4499..4564#4767..4912#5743..5851#6734..6798#6883..7030#ATGACATCCTCCCCCTCCTGGTTCTCCGGCATCGCCCGCGCCTCCTCCGCCATGCCCCCCGGCGGCGTCGCCTCCGCGGCCGCTCCCCTCTCCGATGGCGCGGGTGGGAGGGGCGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGAGTGGTCGCCGCCGTGGTTGCTGCGGGGCCTGGCGCTGGTGCTGGCGTTGGCGCGGGCGGGAAGAGGAGGCAGGTGCAGGGGGCGCTGTTCAAGTACGGCCCCAAGTCCGCCCAGGTACTCTCTCTCTCTCTGGGGCGCGCGCGCGTGCGGCTTGCGGCGGGAGATCTGTGGGGGATCGTTCTTGGGATTGCTCGGGATGATGGATTCGAGGGTTTATTACTTTGCATTGTAGAAATCCTGCGATTGCGTCGTGGGGGGTTTGAAATGGTGTATGATTTGAGCGGGGGACGAGGAGGAATTTCCCTCAGTCGAGATGGTTCTAGAATCTTCTAGAAGGTTACCGCGTTCGTGCCGCCCAGCCTTCGAGATCGATGCGGGGATCTCCTCGTTGGATTCGTCCTTCTGCCCTTTTCCGCTGGGTGCGTGCGGTTGTTGAGAGAGAGAGAGATAGAGGCTTATGGAATAAGGAAGCTTCTGTAGCATAGCCGTGTTTCTACTCATGATCCAGGGCTTGTAATGGAAATAAGCGCAGGCGATTCTTTCTTTAGAGGGGTTGCACTTTTGGGAGCCCAACTTGTGTGCTAATAATTTTCTTCTCTTAGTTTTCTTTTGCTGATGTTAACACGGCTAGCTAGGCCTTTTGCGTCTTGTCTCCTTGCTTCTGTATCATTTCTCGCGTGGAAGAAAGCCTACTGAATGAATATACAATGTTTGACCCTATCTAGGCTTATGGTCCCTTTTGCATAGTAGTTCCTTTTGCTGCGTGTAGAGGATTTGTTTTCTACTTTGAAATTGCGACGAAATAAGTGTACAAATCTCTGCCAGCTATGTTTGTTATGATCCTTTGTTGCTACAAGCAAGGTTGTTTATATACACCTTTTGTTGTAGTACAAAAGTGAGGGTCTCAACTCTGAATGGGATAATCTGTCACAATGTACCTGCATTCTTTCCTTTGTTTGGACCACGTAGTGCCACATTGCCATTTGTGACCTTATTAAGATGATCAGTTGGTAGTAAGCCTATAGAACATCAGCATTATATCATGCCAGGATGTGGTTGCAATATTGTGGTTTCTAGATAACTTATTCTGCCGGTAAGATGTACCCTTTTACACATTATAGAATCTGGTTGGAATTTTGAAATCTCTTGGAAGTTTTATCATTTTAATTCTAAGGTAAAGTCCATTTTTGGCACTCAAAACTTGTTGGATTCCATTTTTTACCGTTAACTTAAAACCCAGTCATTTCTCACACTCAACTTTCAAAACCAGAAAAATAACACCCAAAAGCTGATTCCATGGTAGTTTTGATTGACATGACAACTGACATAGCCTTCAGGTACTAAACTTTGTTGGTGTGGAACTGTGGACCTAAGTGGCATCCACATTAGCAAGACATGTATAGTAGGAGTCTGCACTAGTGAAAACCATCACCATGTCAATAAAAACACTGTGAATATGGTCTAGAGTGTTATTGATTTGCTTTTGAGAGTCGAGGGCGAAAAAATGAAAAAAAAAACTGGTTATTGAGTTTAGCATGAAAAAGGACTTCTAGAATAGTTCAAGCACCAAACATGGTCTTTAACCTAGTTGTTTTAACTACCTCAGAGGCCCAGATGTCTATGCACTATGCTTTGTTATGTTGTGTACATTCTGTAACACCCTTCATTTTCTGATGATTTGCATATACAAAGGAAACCCTCACAGCCTCACCATCCATATATTAACTTCTAATTAGATATGGCTTGTCATTACTGTTTTGTTTCTTCTATAAATTTCTTCTTGCAGGTCGCATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTTGACGGATGGGTTTTTAGCAACCGAGTAAGTTGGCAATATGCAGTTCCATTAAATATTTTTCCATATCATTTGTTGAATTAGAAGACACTATTGATAGTGAAAGTTCTCATGAGTTTCCAATTAGGGTACTGTCCAAGCGCTTCAGTAACAACGTTATTTGGTATCTTTACTGTTAGTTAGTCAAGTTATTGTTTTGATTAGTCTATAAAATAGTTGTTCTGAAGCATGGAGTGAAATGCCTTTCTCCCTGAAAGTTCTTTCATCCTAGTCTGTGGTCTCCTCCCTATCCTAAAGTGCCTTCCCTTCAGCCATGTCACTCCTCAGTATGGAAGCTGCCCTGATGTACTGAGTTGCATAGCATGATGCATACATGGAAACATGGAAATATATACTATATAATCACCATTTAGTACTTCATGATGCATTCATGCAATCACTTCCCTCTCACCAAATCAGTATGAGATAATCTAGTTGTTGTTATTATTTACTCGGCATATGTATAAAATTTCAAGTTATAATTCATTATATGTTGAGAGTAACAAACATGAGAAAAATCTGAAAAATGATGAATTGGAGAAGGATAGGAAAAATAACACAATAAGTTCTGTAAGTATATAATCATAATACATATGTTATCATTTTTTTTTCTCTTGGTTAAGACTGGAACTAATTTTATTATTCTAATCCATGTTGGAACATTACAGCTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGAGAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAGCTTAGAGCAGGTATGATCTGTAACATGGACCTTTTCATCCTTAGAGTTTAAGAACCGCATTTGCATACATTGAGGTGTTCATGGTCTTAGTGGCATGCTGAAAGAAGAATTGAGGTACTTAAGAATGATTTTAATGTTCTCAAGTTAATTTTCATATTCTTTTTTACATAATATGTTCAGTTTTTCAATCTTGTCATTCCGCACTTTGATCGACTTACTTACATGATTTGACTACACATTCACTCATACCCAGGAAGCTAGTTCTAGAATCTCATTTGTATTTTCCAATGACCACCAAAGTAGTCATGAGATCTTAATTTATACTTGCCATCCGAAAGTACTGTATGCAGAATGTGGTTGCTTGAGCTATCTGCTAGTTTGGTGGTAAACTTCTTTTTTCCCTTCTGTGTTTTTCTTATTCTACTGCAGGACGTTTGATTGGATTGTCCATTTTATTCGTTTTTTTGGGTGCTTTACATTTTAACCCTACTTTTTTGGAATCAAGTATTGATTATATGTTTTCTTGTCAAAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAATTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGTATGCTCACTGATATGTTGGTACTATTTATAGTCTAAATAGTAATGCTTCATAGGTTTATAAACTTACCCCAGTGGTCAAGTGGATCCCTAAACTTGAGAATTGCATACTGGACTTGGCACCTGTGTTTCACTTTAGATTACAGATGTGCCACACTTAATATAATTTCTGATTTGATGTGCTGAGTGGTGACCATGTCTAGTGTTACTGACTACTGTAGGAACTTACCAGCCATGCCATGGACATATACGAAAGCAAATTCATCCAGTATTGTTAAAACTGTAGGTACATAAGCACTTGTATTGATATTAATCCCCATACTAGTCCAATTGCATGCAAATCCCTTCCAATTCCACCTTGCCCCAAACCTGTCCTAGTCCATTCTGCTTCCCCTTTTCACTTGCCTATCATAATTTCCTTCTCCGTGCGCTGAATTGTAGCTGAGTTTCAAGCTTATCATGTTCAGATTGGACAAAGGGAGTTTAGTATTAATTCATAGTAGAAATTAAAGCATGTGAAGAAGGGAATGAATCACTTATCATAAGCCCTCTTTCTATCCTCCCCTTATCTCACTTTTGGTTGACCAGCTCCCATTTTGATTTACTCAACTATCTCTGTCTGTCTTCCCGCTCTAAACAACCAGCCTTTTTGCTGTTTAGCTATCCAATTTCCAATGCATTCTGAAATTCAGAAAACACACAATTTGTGAACTTTGCTCGAGAATCCTAGAAGTCTGGGTCTCATATTCTCATTAGCCAAGAGCACTTTCATTATTTTCAGTGGGGCACACATAATGCCCATGGATTCCATATTAGGGGTTTATGTGTACATTTTCATCTCAAATTCACTTTTCATGGAAGACTCATGTGGGCAAAACATCCACATTGAACTTAGTCCGGTTTGTCAGGTCAGGTACTGTGCTCCTTTTGGCATGTTTGGGACCTTGAGTGGTCCATTTTAAACAAATTCAGAGGCTCTTATATGCATTTCTAAAGTTTAGACATCTTGACCACTTGAGACAAGTTTATGGTCAGCATTGTATTTTTATCATAGAAAAAGATAACACAATTTTTTCCGTCAATGCCAGGATATTGTGCATTACATGCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGTATTCTCCCTGTCCCTATCTTCTTGTTTGGATGCGAAGGGGTGAAGTGAAAATATTTGAATGTGAACTATGATAGGAAGTTAGGGACTTCCTCCCTAAATAACAGACCAAACTGATGAATTTGTAACCTGTTGAGAATAATTGCTTTTTTATGTGTAAATCCATGTAAACGGTATCTTGATTCAACTTCTATGATATTCAGGCCCCAGTAAGTGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAAAATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCCGATTACTGCCTACAGGTATCAATTTCCATGCCTGAGATGCTCAGATATACTTTTGTGTCAGTGATGTCTTCCTCTGGGATTAATAAAGATGTCGCAAGATCTACACCTCTGTTAGCAACAAAAATTTCAATAACCGCTCATACTATGATTACTGAAAAATGATAGTTAATGGGATTCAGTATTTTGATTTATGATCATGTATTCTTCAACCACTACGTAAAGAGTTAGATGAGGAGTCACAAGCTGTTATTGCTATTGGATGTTTAACCTATGTTCTGAAAAACTTTAGTTGGGACTTGAGAATTTTGTAGAATCCCTTATAGTTCTCTAGATTGTGATGATGATGACCTAAGACACAACTTGTTGCGCCTCCTTCGGCTATGATGACCAATGATACAAAATTTCTTGCTCGTAGACTCTGTGGACCATGTAGCATGGGAGAGTTATCTATGTTATGTTGAGCAAAGAAACTCGCAAATACAAGTTAAAATCATGGATGATGAAAATTGAACCACATGAATAGAACAAACATGATAAGAATGAAACACTATGTAACAAACCTGATGTTTTTGTCTCCCACTTATGTTTCTCATGACCAACTCTTAGTGGGGTCTTAGTCCTTTTTTCTTTTCAAATGATGCAAAGTTAACCTTTCTGTATTGTTTCAAATGATCCAATATCCTATTACTTCTTTTTGTTCCATATCTTTTATTTTATTAGATCTATTTACCAGCATATCTCCTAGTATCCTTTGTTAGTCAGTGTGATCTTAAAAAATTATCTGCAACGAATCAAACATCATTTTTTCTTCAGTTGTACTCTAATGCCATAGAAATAATGTGTAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAGCTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTGCCAGGTATTGTCCCTTTCTACTTGTGACTTTGTCAACACACATGGAAACACCACTTTTTTTGGTCATAGCCAGAGCCCAGAATTGGTGGTAAATATTGCGTTCACATTTTCATTATCATTCTGTTCTGATGACTATGAATACAGGGATTAGTGATGGTTATCCTTTTATGGTCCTTTGTTTCTGTATCTACTTAAAGCAACAATTTCAAGCTGATCGATCTAAGAAAAATAACCGTTTCACTATCAGATATTTGATATTTTCTTAATGCCTAATTCACCAAGTAGTTAAATTATGTTGTTCCTTGAATCTGTTTACAGCTTGTAGGTTGAATGCTTGCATTTGCATTGGTGGCCATATATGCATAGATATATTAGACTTGGTTTCCTCAATGCTATAATGTAATAAAACTAGGCTTGATTACGTTTAGTACTTGACTTGCATGTTAAGTAATTGAAAGGTGTGAAGATACAAAAACAGAAAGAACCGAAGAACTCATATATATTGATGGGGGTCCTGAACCTAACTTTGAGCATTGGGCTTTCGTAATTTATACATGCATAGATTGTAAATGGGGTAATTTTCCCAGTGGGCTGTTTTGGTTCTATTTGCTTTTTGACCACATTAAGCAAGCTAATGGAATAGAAATCAGGAAAAGAAGTACATTTAAAATCTGCATTAGAATGTGAAAATCAATAACCTTAAGGAAATTAGCGAAATTTGAGCATAACAAACATCCCAGAAGCTTCTCTTTGGCATACTGTATAATGCATTCTACAAAAAAAAGACTTTTTGTTCGTAGAGTTAAAGGTTGCCAAATGAGGTAAGCTACGATGACATTATGCTGTAGCTGCTGAATTTTATATCTTGCAAGTGCTTTGGCTGCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACTTGTGGACAGGTGAAATTAGAAATCCAAACATACCAGATACAATTTTGATATGATATCATCATGCTCTAATGCTCTATATATGTTTCACTGCAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAACCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAGAGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024617

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA024617&oldid=50211"