BGIOSGA024622

From RiceWiki
Revision as of 06:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024622| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024622, complete gene.| tag = OJ1136_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024622

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024622, complete gene.

LocusTag

OJ1136_A05.22

Ensembl Transcript ID

BGIOSGA024622-TA

Ensembl Protein ID

BGIOSGA024622-PA

Length

2928

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5980277..5983204

Sequence Coding Region

5983014..5983204,5982649..5982905),complement(5982429..5982519,5982254..5982302),complement(5981250..5982137
,5980965..5981167),complement(5980277..5980889

Genome Context

<gbrowseImage1> name=IndicaChromosome07:5980277..5983204 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:5980277..5983204 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGGTGACGCCGCAGATCACGGTGAGCGACGGGAGGCTGGCGGTGCGGGGGCGGACGGTGCTGACCGGCGTGCCGGAGAACGTGACGGCGGCGCACGCGTCCGGCGCCGGGCTCGTCGACGGCGCCTTCGTCGGCGCCGACGCCGGCGAGGCCAAGAGCCACCACGTCTTCACCTTCGGCACGCTCCGGGAATGCCGGTTCATGTGCCTGTTCAGGTTCAAGCTGTGGTGGATGACGCAGAGGATGGGCTCCTCCGGCCGCGACGTCCCGCTCGAGACCCAGTTCATGCTCATCGAGGTCCCCGCCACCGCCGCCGGCGACGGCCACGACGGCGGCGGCGACGGCGAGCCGGTGTTCGTGGTGATGCTGCCGCTGCTGGAGGGGAAGTTCCGCGCGGCGCTGCAGGGAAACGACGACGACGAGCTCCAGATCTGCATCGAGAGCGGGGATAAGGCGGTGCAGACAGAGCAGGGCGTGAACATGGTGTACATCCACGCTGGGACCAACCCCTTCGACACGATCACCCAAGCCATCAAGGCGGTGGAGAAGCGAATGCAGACGTTCCACCACAGGGACAAGAAGAAGATGCCGTCCTTCTTGGATTGGTTCGGGTGGTGCACATGGGACGCGTTCTACACCGACGTCACCGCCGACGGCGTCAAGCAGGGCCTCCGCAGCCTCGCCAATGGCGGCGCGCCGCCGCGCTTCCTCATCATCGACGACGGCTGGCAGCAGATCGGCACCGAGGACGACGACACGGACGAACACCCCGCCGTCGCCGTCCAGGAGGGCGCCCAGTTCGCCAGCCGGCTCACCGGCATCAAGGAGAACGTCAAGTTCCAGAGCAAGAACGGCGGCGCCGGCGAGGACACGCCGGGGCTGAGGATGCTGGTGGAGGAGGTGAAGGGGGAGCACGGCATCCGGCAGGTGTACGTGTGGCACGCCATGGCCGGGTACTGGGGCGGCGTGGCGCCGGCGCCGGCGATGGAGCGGTACGAGGCGGCGCTGGCGTACCCGGTGCAGTCGCCGGGGGTGACGGCGAACCAGCCGGACATCGTCATGGACTCCCTCTCCGTGCTCGGCCTGGGCCTCGTCCACCCGCGCAAGGTGCTCGACTTCTACGACGAGCTCCACGCCTACCTGGCGTCGTGCGGCGTCGACGGCGTGAAGGTGGACGTGCAGAACATCATCGAGACGCTCGGCGCCGGCCACGGCGGCCGCGTCGCGCTCACGCGCGCCTACAACCGCGCGCTCGAGGCGTCCGTGGCGCGGAGCTTCCCGGACAACGGCTGCATCTCCTGCATGTGCCACAACACCGACATGCTCTACAGCGCGCGCCAGACCGCCGTCGTCCGCGCCTCCGACGACTTCTACCCTCGCGACCCGGCGTCCCACACCATCCACGTCGCCTCCGTCGCCTACAACACCGTCTTCCTCGGCGAGTTCATGCAGCCCGACTGGGACATGTTCCATAGCTTGCACCCGGCGGCGGAGTACCACGGCGCGGCGAGGGCGATCGGCGGGTGTCCGATCTACGTCAGCGACAAGCCGGGGAACCACAACTTCGATCTGCTCAGGAAGCTCGTCCTCCCCGACGGCTCCGTGCTCCGGGCGCGCCTCCCCGGCCGCCCCACCCGCGACTGCCTCTTCTCCGACCCGGCGCGCGACGGCGAGAGTTTGCTCAAGATATGGAACCTGAACAAGTGCGGCGGCGTGGTCGGGGTGTTCAACTGCCAGGGCGCCGGGTGGTGCAGGGTGGCCAAGAAGACGCGCGTGCACGACGCGGCGCCCGGGACGCTCACCGGCGCCGTGCGCGCCGACGACGTCGACGCCATCGCGCAGGTCGCCGGCGGCGACGGCGGAGGCTGGGACGGGGAGGCCGTGGTGTACGCGCACCGGGCGCGTGAGCTGGTCCGGCTGCCGCGCGGCGCCGCGCTGCCGGTGACGCTCGGGGCGCTCGAGTACGAGGTGTTCCACGTCTGCCCCGTCCGCGCCATCGCCGCGGCGCCGGGCGGCGCCGCCGTCGCGTTCGCGCCCGTCGGGCTCCTCGACATGTTCAACGCCGGCGGCGCCGTCGAGGAGTGCGCCGTCGATGCCGCAGCCGCCGTGGCGCTCAGGGTGCGCGGTTGCGGCCGGTTCGGCGCCTACTTCTCGCGGAGGCCGGCGAGGTGCGCGCTCGACGGCGCCGACGTGGGGTTCACCTACGACGGCGACACGGGGCTCGTCGCCGTCGACCTGCCGGTGCCGGAGCAGGAGATGTACAGGTGGAACCTGGAGATTCACGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MTVTPQITVSDGRLAVRGRTVLTGVPENVTAAHASGAGLVDGAFVGADAGEAKSHHVFTFGTLRECRFMCLFRFKLWWMTQRMGSSGRDVPLETQFMLIEVPATAAGDGHDGGGDGEPVFVVMLPLLEGKFRAALQGNDDDELQICIESGDKAVQTEQGVNMVYIHAGTNPFDTITQAIKAVEKRMQTFHHRDKKKMPSFLDWFGWCTWDAFYTDVTADGVKQGLRSLANGGAPPRFLIIDDGWQQIGTEDDDTDEHPAVAVQEGAQFASRLTGIKENVKFQSKNGGAGEDTPGLRMLVEEVKGEHGIRQVYVWHAMAGYWGGVAPAPAMERYEAALAYPVQSPGVTANQPDIVMDSLSVLGLGLVHPRKVLDFYDELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVALTRAYNRALEASVARSFPDNGCISCMCHNTDMLYSARQTAVVRASDDFYPRDPASHTIHVASVAYNTVFLGEFMQPDWDMFHSLHPAAEYHGAARAIGGCPIYVSDKPGNHNFDLLRKLVLPDGSVLRARLPGRPTRDCLFSDPARDGESLLKIWNLNKCGGVVGVFNCQGAGWCRVAKKTRVHDAAPGTLTGAVRADDVDAIAQVAGGDGGGWDGEAVVYAHRARELVRLPRGAALPVTLGALEYEVFHVCPVRAIAAAPGGAAVAFAPVGLLDMFNAGGAVEECAVDAAAAVALRVRGCGRFGAYFSRRPARCALDGADVGFTYDGDTGLVAVDLPVPEQEMYRWNLEIHV</aaseq>

Gene Sequence

<dnaseqindica>1..191#300..556#686..776#903..951#1068..1955#2038..2240#2316..2928#ATGACGGTGACGCCGCAGATCACGGTGAGCGACGGGAGGCTGGCGGTGCGGGGGCGGACGGTGCTGACCGGCGTGCCGGAGAACGTGACGGCGGCGCACGCGTCCGGCGCCGGGCTCGTCGACGGCGCCTTCGTCGGCGCCGACGCCGGCGAGGCCAAGAGCCACCACGTCTTCACCTTCGGCACGCTCCGGTGAGCAATCTCACAGAATTAATTTCCCAAGATTTCTACAAATTTGTCTTCGCTGCATTTTTGAATTCACAGAATTTTAAAGAGTTTTTGGCATCTGAAATTTTGCAGGGAATGCCGGTTCATGTGCCTGTTCAGGTTCAAGCTGTGGTGGATGACGCAGAGGATGGGCTCCTCCGGCCGCGACGTCCCGCTCGAGACCCAGTTCATGCTCATCGAGGTCCCCGCCACCGCCGCCGGCGACGGCCACGACGGCGGCGGCGACGGCGAGCCGGTGTTCGTGGTGATGCTGCCGCTGCTGGAGGGGAAGTTCCGCGCGGCGCTGCAGGGAAACGACGACGACGAGCTCCAGATCTGCATCGAGAGCGGTAAGTAGGTCTTAGGATACAAATTTGGATGAAATTTGTGTTTGAAAATTAAATTTAGACGAGTTTCGGTGAAATTTTCCAAAACTTTGGATGAAATTTGTAGTGATTTGGATGACGTTTTTGGGGCAGGGGATAAGGCGGTGCAGACAGAGCAGGGCGTGAACATGGTGTACATCCACGCTGGGACCAACCCCTTCGACACGATCACCCAAGCCATCAAGTATGAATTTCTCTCCGCTGTCCCCATCACTAAAATTCCTACTCGTACTACGTTTCAAATGAAATTTACACATCTGACACGTCTATAAATTCTAATTCTAATGTTTGAAATTTGAAAATGATGCAGGGCGGTGGAGAAGCGAATGCAGACGTTCCACCACAGGGACAAGAAGAAGGTAATACTACCAATTCCTTTTGAAATACAGTTCTTTCTTCTTCTTTTTTGAAATATTGAGAACCGATTTGATCATTTTTGTTTGTTTGATGGATCGATTTTCTGTTCATGTCACAGATGCCGTCCTTCTTGGATTGGTTCGGGTGGTGCACATGGGACGCGTTCTACACCGACGTCACCGCCGACGGCGTCAAGCAGGGCCTCCGCAGCCTCGCCAATGGCGGCGCGCCGCCGCGCTTCCTCATCATCGACGACGGCTGGCAGCAGATCGGCACCGAGGACGACGACACGGACGAACACCCCGCCGTCGCCGTCCAGGAGGGCGCCCAGTTCGCCAGCCGGCTCACCGGCATCAAGGAGAACGTCAAGTTCCAGAGCAAGAACGGCGGCGCCGGCGAGGACACGCCGGGGCTGAGGATGCTGGTGGAGGAGGTGAAGGGGGAGCACGGCATCCGGCAGGTGTACGTGTGGCACGCCATGGCCGGGTACTGGGGCGGCGTGGCGCCGGCGCCGGCGATGGAGCGGTACGAGGCGGCGCTGGCGTACCCGGTGCAGTCGCCGGGGGTGACGGCGAACCAGCCGGACATCGTCATGGACTCCCTCTCCGTGCTCGGCCTGGGCCTCGTCCACCCGCGCAAGGTGCTCGACTTCTACGACGAGCTCCACGCCTACCTGGCGTCGTGCGGCGTCGACGGCGTGAAGGTGGACGTGCAGAACATCATCGAGACGCTCGGCGCCGGCCACGGCGGCCGCGTCGCGCTCACGCGCGCCTACAACCGCGCGCTCGAGGCGTCCGTGGCGCGGAGCTTCCCGGACAACGGCTGCATCTCCTGCATGTGCCACAACACCGACATGCTCTACAGCGCGCGCCAGACCGCCGTCGTCCGCGCCTCCGACGACTTCTACCCTCGCGACCCGGCGTCCCACACCATCCACGTCGCCTCCGTCGCCTACAACACCGTCTTCCTCGGCGAGTTCATGCAGCCCGACTGGGACATGTTCCATGTAAGCATCAACCCCTTCGTGTCCGACGCCGGCGCCATTTCTTCTTCTTGCTTCTTAGGTGTTCGATGTGTGGTTTTTGCAGAGCTTGCACCCGGCGGCGGAGTACCACGGCGCGGCGAGGGCGATCGGCGGGTGTCCGATCTACGTCAGCGACAAGCCGGGGAACCACAACTTCGATCTGCTCAGGAAGCTCGTCCTCCCCGACGGCTCCGTGCTCCGGGCGCGCCTCCCCGGCCGCCCCACCCGCGACTGCCTCTTCTCCGACCCGGCGCGCGACGGCGAGAGGTAACAAACAAAGATTTCGAAATTTGTGTGAAATGGTTTCGAATTTGGGTTAAAATTTGATGGAATTTTTTGTAGTTTGCTCAAGATATGGAACCTGAACAAGTGCGGCGGCGTGGTCGGGGTGTTCAACTGCCAGGGCGCCGGGTGGTGCAGGGTGGCCAAGAAGACGCGCGTGCACGACGCGGCGCCCGGGACGCTCACCGGCGCCGTGCGCGCCGACGACGTCGACGCCATCGCGCAGGTCGCCGGCGGCGACGGCGGAGGCTGGGACGGGGAGGCCGTGGTGTACGCGCACCGGGCGCGTGAGCTGGTCCGGCTGCCGCGCGGCGCCGCGCTGCCGGTGACGCTCGGGGCGCTCGAGTACGAGGTGTTCCACGTCTGCCCCGTCCGCGCCATCGCCGCGGCGCCGGGCGGCGCCGCCGTCGCGTTCGCGCCCGTCGGGCTCCTCGACATGTTCAACGCCGGCGGCGCCGTCGAGGAGTGCGCCGTCGATGCCGCAGCCGCCGTGGCGCTCAGGGTGCGCGGTTGCGGCCGGTTCGGCGCCTACTTCTCGCGGAGGCCGGCGAGGTGCGCGCTCGACGGCGCCGACGTGGGGTTCACCTACGACGGCGACACGGGGCTCGTCGCCGTCGACCTGCCGGTGCCGGAGCAGGAGATGTACAGGTGGAACCTGGAGATTCACGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024622