BGIOSGA024623

From RiceWiki
Revision as of 06:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024623| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024623, complete gene.| tag = OsI_253...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024623

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024623, complete gene.

LocusTag

OsI_25338

Ensembl Transcript ID

BGIOSGA024623-TA

Ensembl Protein ID

BGIOSGA024623-PA

Length

5117

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5937860..5942976

Sequence Coding Region

5942953..5942976,5942639..5942831),complement(5942147..5942342,5941909..5942009),complement(5941628..5941817
,5940901..5941167),complement(5940465..5940810,5940239..5940376),complement(5940006..5940131
,5939701..5939913),complement(5939285..5939543,5938992..5939194),complement(5938527..5938877
,5937860..5938444

Genome Context

<gbrowseImage1> name=IndicaChromosome07:5937860..5942976 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:5937860..5942976 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCGACGCGGATGCCGTGAAGTCGGGGAGGCACGGGAGCGGGCAGGCGTGCCAGATCTGCGGCGACGGCGTGGGCACGACGGCGGAGGGCGACGTGTTCGCCGCCTGCGACGTCTGCGGCTTCCCGGTGTGCCGCCCCTGCTACGAGTACGAGCGCAAGGATGGCACCCAGGCTTGCCCCCAGTGCAAGACCAAGTACAAGCGCCACAAGGGGAGCCCGGCGATCCGTGGGGAGGAAGGCGAGGATACTGATGCTGATGATGTCAGTGACTACAACTACCCTGCATCTGGCAGTGCCGACCAGAAGCAGAAGATTGCTGATAGGATGCGCAGTTGGCGCATGAATGCTGGGGGTGGTGGAGATGTCGGCCGTCCCAAGTATGACAGTGGCGAGATCGGGCTCACAAAATCTCGGGAGAAATCCCCTGGAGCTTCCCCTGATCATCATATGATGTCTCCTACCGGAAACATTGGCAAGCGTGCTCCATTCCCCTATGTGAACCATTCACCAAATCCATCAAGGGAGTTCTCTGGCAGCATTGGAAATGTTGCCTGGAAAGAAAGAGTTGATGGCTGGAAACTGAAGCAGGACAAGGGAGCAATTCCCATGACCAATGGGACAAGCATTGCCCCTTCTGAAGGTCGGGGAGTTGGTGATATCGATGCATCCACTGATTACAATATGGAAGATGCCTTACTGAATGATGAAACTCGCCAGCCTCTCTCTAGAAAAGTTCCCCTTCCTTCATCCAGAATAAATCCCTACAGAATGGTCATTGTTCTGCGTTTGGTTGTTCTAAGCATTTTCCTTCACTACCGTATTACGAATCCTGTGCGCAATGCGTATCCGCTCTGGCTTTTATCTGTTATATGTGAGATTTGGTTTGCTTTGTCCTGGATATTGGATCAGTTCCCGAAGTGGTTTCCAATCAACCGTGAAACCTACCTTGATAGGCTGGCATTGAGGTATGACAGAGAAGGTGAGCCATCTCAGTTGGCTGCTGTTGACATTTTTGTCAGTACAGTCGACCCCATGAAGGAACCTCCTCTTGTTACTGCCAATACCGTGCTGTCCATTCTTGCTGTTGATTACCCAGTGGACAAGGTCTCTTGCTATGTATCTGATGATGGTGCTGCAATGCTGACTTTTGATGCATTGGCTGAGACTTCAGAGTTTGCTAGAAAGTGGGTTCCATTCGTTAAGAAGTATAACATTGAGCCAAGAGCTCCTGAGTGGTACTTCTCCCAGAAAATCGATTACTTGAAAGACAAAGTCCACCCTTCATTTGTTAAAGACCGCCGTGCCATGAAGAGAGAATATGAAGAATTCAAAGTTAGGATAAATGGCCTTGTTGCTAAGGCACAGAAAGTCCCTGAGGAGGGATGGATCATGCAAGATGGCACACCATGGCCAGGAAACAATACTAGGGACCATCCTGGAATGATTCAGGTTTTCCTTGGTCACAGTGGTGGCCTTGATACCGAGGGTAATGAGCTTCCCCGCCTGGTCTACGTATCTCGTGAGAAGCGTCCTGGGTTTCAGCACCACAAGAAGGCTGGTGCCATGAATGCTCTTGTTCGTGTCTCAGCTGTGCTTACCAATGGACAGTACATGTTGAATCTTGATTGTGATCACTACATCAACAACAGCAAGGCTCTGCGGGAAGCTATGTGCTTCCTTATGGACCCAAACCTAGGAAGGAGTGTCTGTTATGTTCAGTTCCCACAAAGGTTCGATGGTATTGATAGGAATGATCGATATGCGAACAGGAACACTGTGTTTTTCGATATTAACTTGAGGGGTCTTGATGGCATCCAAGGACCAGTTTATGTGGGAACTGGTTGTGTATTCAACAGAACTGCTCTATATGGTTATGAACCCCCAATTAAGCAGAAGAAGAAGGGAAGTTTCTTGTCATCACTTTGTGGGGGCAGGAAGAAGGCAAGCAAGTCAAAGAAGAAGAGTTCGGACAAAAAGAAGTCAAACAAGCACGTGGACAGTGCTGTGCCAGTTTTCAATCTTGAAGATATAGAGGAGGGTGTTGAAGGTGCTGGATTCGATGATGAGAAATCACTTCTTATGTCTCAAATGAGCTTGGAGAAGAGATTTGGCCAGTCTGCAGCGTTTGTTGCCTCCACTCTCATGGAATATGGTGGTGTTCCTCAATCTGCAACCCCAGAATCTCTTTTGAAAGAAGCTATCCATGTGATAAGTTGTGGCTATGAGGACAAGACCGAATGGGGAACTGAGATTGGGTGGATCTACGGTTCCGTGACAGAAGATATTCTCACTGGATTCAAGATGCATGCGCGAGGCTGGAGATCAATCTACTGCATGCCCAAGCGCCCAGCTTTCAAGGGGTCTGCTCCTATCAATCTTTCAGATCGTCTTAACCAAGTGCTTCGGTGGGCACTTGGTTCTGTTGAAATTCTTTTCAGTCGCCATTGTCCCATATGGTACGGCTATGGAGGACGCCTTAAGTTCTTGGAGAGATTTGCCTACATCAACACCACTATTTATCCATTGACATCGATCCCGCTTCTCATATACTGTGTTTTGCCTGCTATCTGTTTGCTCACTGGGAAGTTCATCATCCCAGAGATTAGCAACTTTGCTAGTATTTGGTTCATCTCTCTCTTCATTTCAATTTTTGCCACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCATCGATGAGTGGTGGAGGAATGAACAGTTCTGGGTTATTGGAGGTATATCTGCGCATCTTTTTGCCGTCTTCCAGGGTCTCCTCAAGGTGCTTGCTGGTATCGACACCAATTTCACTGTCACCTCAAAGGCTTCTGATGAAGATGGTGACTTTGCTGAGCTCTACATGTTCAAGTGGACAACGCTTCTCATCCCACCGACGACCATCTTGATCATTAACCTGGTCGGTGTTGTCGCTGGTATCTCATACGCGATCAACAGCGGCTACCAATCATGGGGACCGCTCTTTGGCAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCACTTGTACCCCTTCCTCAAGGGTCTTATGGGTCGGCAAAACCGCACTCCGACCATCGTTGTTGTTTGGGCAATCCTTCTGGCTTCGATCTTCTCATTGCTGTGGGTTCGCATCGATCCATTCACCACCCGAGTCACCGGCCCAGATACCCAAACATGTGGCATCAACTGCTAA</cdnaseq>

Protein Sequence

<aaseq>MDGDADAVKSGRHGSGQACQICGDGVGTTAEGDVFAACDVCGFPVCRPCYEYERKDGTQACPQCKTKYKRHKGSPAIRGEEGEDTDADDVSDYNYPASGSADQKQKIADRMRSWRMNAGGGGDVGRPKYDSGEIGLTKSREKSPGASPDHHMMSPTGNIGKRAPFPYVNHSPNPSREFSGSIGNVAWKERVDGWKLKQDKGAIPMTNGTSIAPSEGRGVGDIDASTDYNMEDALLNDETRQPLSRKVPLPSSRINPYRMVIVLRLVVLSIFLHYRITNPVRNAYPLWLLSVICEIWFALSWILDQFPKWFPINRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFVKKYNIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGQYMLNLDCDHYINNSKALREAMCFLMDPNLGRSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKQKKKGSFLSSLCGGRKKASKSKKKSSDKKKSNKHVDSAVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAAFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQTCGINC</aaseq>

Gene Sequence

<dnaseqindica>1..24#146..338#635..830#968..1068#1160..1349#1810..2076#2167..2512#2601..2738#2846..2971#3064..3276#3434..3692#3783..3985#4100..4450#4533..5117#ATGGACGGCGACGCGGATGCCGTGGTGAGTGTGCCCCGCCCGAAATGCCGATGGGTTTTCGGCCGCATCTCGTGTGGATCTTGCGGAGGAGACTCCAGATTTGGTTTTGATTTTTGGTTTTGTGGGTGATCTATCTGTTGCGCAGAAGTCGGGGAGGCACGGGAGCGGGCAGGCGTGCCAGATCTGCGGCGACGGCGTGGGCACGACGGCGGAGGGCGACGTGTTCGCCGCCTGCGACGTCTGCGGCTTCCCGGTGTGCCGCCCCTGCTACGAGTACGAGCGCAAGGATGGCACCCAGGCTTGCCCCCAGTGCAAGACCAAGTACAAGCGCCACAAGGGTAATGCTACCATCTCTCTCTCTCTTCTCTCCCTCCTCTCCATTTCCGCCGATCTCGCCGCCATCGACTGTAAATAAGTTCAGAAACATCTCAGAAAAAAATAAGTCTGGATCTCTAGTTCAGAACAGTCAAAACGAGCATTCTTCTAGGTGGATCCTGTTGCTTTCTTGTCAGGAAGGTCATACAAGATCCAATGTTTGTTGATTTTTTGGAAATTCAGAAAAAAATAATGTCGATTAGTAAACGATGTTACAGTCATGCTAAGGCTTTGCTGAACTGTGTATGGAATTATTCAGGGAGCCCGGCGATCCGTGGGGAGGAAGGCGAGGATACTGATGCTGATGATGTCAGTGACTACAACTACCCTGCATCTGGCAGTGCCGACCAGAAGCAGAAGATTGCTGATAGGATGCGCAGTTGGCGCATGAATGCTGGGGGTGGTGGAGATGTCGGCCGTCCCAAGTATGACAGTGGCGAGATCGGGCTCACAAAGTATGACAGTGGCGAGATCCCTCGAGGATACATCCCTTCAGTCACTAATAGCCAGGTGGGTGTGAGTTTTTAACAGATCGTGGTATCAGTTGTCCAGGAATGCTCAAATGGTTAAATATTGAATTGGAATTTTGCAGATCTCGGGAGAAATCCCCTGGAGCTTCCCCTGATCATCATATGATGTCTCCTACCGGAAACATTGGCAAGCGTGCTCCATTCCCCTATGTGAACCATTCACGTATGTTTATTTCTTGATATGATGCCACTTCTCATTAGGTACATTCGCTTGAGATCTAAGATCGTAATTATCTTTTCTTGCTTCTTTCTAGCAAATCCATCAAGGGAGTTCTCTGGCAGCATTGGAAATGTTGCCTGGAAAGAAAGAGTTGATGGCTGGAAACTGAAGCAGGACAAGGGAGCAATTCCCATGACCAATGGGACAAGCATTGCCCCTTCTGAAGGTCGGGGAGTTGGTGATATCGATGCATCCACTGATTACAATATGGAAGATGCCTTACTGTGAGTTCTGACATCTTCCCCTCAGGGAACATAATCTTATAAGGGATCATATGCGCTGACATTTACAAATGTAGTATGTGTGGATTCTATCTAAAACACTGACTAACCGAAAATTATTATATCGATGTTTATTGTTTTTCAACATAGACATCAACATATAGCCAAGCAAGTGGGTGACCTAAATGTATTAAGAGCTGCACCTTTTTTCCACTAACACTTCCAGCTATAATTTTTGGTACATCGAGGTACTAAACAAAAAGAGGTGTCTGTCCTAAGTTCCTAGTCAACTCTTTAGTGCAGTTGCCCTGAGGTGAATGAGGGTTTTCTGTCCCTGATAGAGGGAAGCAAAAATATATCTGAAAGTTACAAATTGAAATAATTTAGAGATTAAATTATATGAGCATTTTTGATGGTGCATAAACAAGTCTTGTGGCATTAACTTTATGCATTTGAATTCCAGGAATGATGAAACTCGCCAGCCTCTCTCTAGAAAAGTTCCCCTTCCTTCATCCAGAATAAATCCCTACAGAATGGTCATTGTTCTGCGTTTGGTTGTTCTAAGCATTTTCCTTCACTACCGTATTACGAATCCTGTGCGCAATGCGTATCCGCTCTGGCTTTTATCTGTTATATGTGAGATTTGGTTTGCTTTGTCCTGGATATTGGATCAGTTCCCGAAGTGGTTTCCAATCAACCGTGAAACCTACCTTGATAGGCTGGCATTGAGGTGATCTCCTTTTAGTTCTGTTGTACTTAATCCAAACAAACATCCTTATTCATATTGCTGATGCCGTTACCATCTCATTTCCATTAACAGGTATGACAGAGAAGGTGAGCCATCTCAGTTGGCTGCTGTTGACATTTTTGTCAGTACAGTCGACCCCATGAAGGAACCTCCTCTTGTTACTGCCAATACCGTGCTGTCCATTCTTGCTGTTGATTACCCAGTGGACAAGGTCTCTTGCTATGTATCTGATGATGGTGCTGCAATGCTGACTTTTGATGCATTGGCTGAGACTTCAGAGTTTGCTAGAAAGTGGGTTCCATTCGTTAAGAAGTATAACATTGAGCCAAGAGCTCCTGAGTGGTACTTCTCCCAGAAAATCGATTACTTGAAAGACAAAGTCCACCCTTCATTTGTTAAAGACCGCCGTGCCATGAAGGTTTGTTTGCTTTATAAACACATTAATATTAATTTTGCTATCTTCTGCTCCAATGCTAACAGTCTTCCCAAAAAAAAACCTGTTACAGAGAGAATATGAAGAATTCAAAGTTAGGATAAATGGCCTTGTTGCTAAGGCACAGAAAGTCCCTGAGGAGGGATGGATCATGCAAGATGGCACACCATGGCCAGGAAACAATACTAGGGACCATCCTGGAATGATTCAGGTTAGTGTATTTCAAATAAAATCTACTATGACTATGGTTAATGTAGCTTCTTTTACTTGATGATTATGATTATTGCTTTGCTGATTGCTCTTTCTGATTTTTCTCAGGTTTTCCTTGGTCACAGTGGTGGCCTTGATACCGAGGGTAATGAGCTTCCCCGCCTGGTCTACGTATCTCGTGAGAAGCGTCCTGGGTTTCAGCACCACAAGAAGGCTGGTGCCATGAATGCTCTTGTGAGTAGTTGAATATTTACAAAACTTACACTATCTAGTTCATTTTCACTTCTCTTCTAAAGTTCTAATGGAGGATTAATCTTTTTCTGCAGGTTCGTGTCTCAGCTGTGCTTACCAATGGACAGTACATGTTGAATCTTGATTGTGATCACTACATCAACAACAGCAAGGCTCTGCGGGAAGCTATGTGCTTCCTTATGGACCCAAACCTAGGAAGGAGTGTCTGTTATGTTCAGTTCCCACAAAGGTTCGATGGTATTGATAGGAATGATCGATATGCGAACAGGAACACTGTGTTTTTCGATGTAAGTTGGCAATTCTCCTTTAAGATTCTCGCTCATGTGCAACTACTAGTGATAGTGTAATCATATTTTAACAAACGATGCTAATATTTTTTGATGCACTAATTTTAAATTTCTAACAAATTCAATATTTTTTTTGGGATATTTCTGTCTTCTACAGATTAACTTGAGGGGTCTTGATGGCATCCAAGGACCAGTTTATGTGGGAACTGGTTGTGTATTCAACAGAACTGCTCTATATGGTTATGAACCCCCAATTAAGCAGAAGAAGAAGGGAAGTTTCTTGTCATCACTTTGTGGGGGCAGGAAGAAGGCAAGCAAGTCAAAGAAGAAGAGTTCGGACAAAAAGAAGTCAAACAAGCACGTGGACAGTGCTGTGCCAGTTTTCAATCTTGAAGATATAGAGGAGGGTGTTGAAGGTACCATCCATATGTTCCAGTTATTGCATAATTTAGGATTATAAGTTGTAACCAACATATATGCATCCTGACATATCATCTATATGGCAGGTGCTGGATTCGATGATGAGAAATCACTTCTTATGTCTCAAATGAGCTTGGAGAAGAGATTTGGCCAGTCTGCAGCGTTTGTTGCCTCCACTCTCATGGAATATGGTGGTGTTCCTCAATCTGCAACCCCAGAATCTCTTTTGAAAGAAGCTATCCATGTGATAAGTTGTGGCTATGAGGACAAGACCGAATGGGGAACTGAGGTAACATGGGCTTTCTCACAGCAACATTGGTTACATTCTTTTTTAGTAACTTGTGTAAATTTACACCGGGCTATGCAACTTGCAATGGTATGTTAATGCTGACATATGTTGCAGATTGGGTGGATCTACGGTTCCGTGACAGAAGATATTCTCACTGGATTCAAGATGCATGCGCGAGGCTGGAGATCAATCTACTGCATGCCCAAGCGCCCAGCTTTCAAGGGGTCTGCTCCTATCAATCTTTCAGATCGTCTTAACCAAGTGCTTCGGTGGGCACTTGGTTCTGTTGAAATTCTTTTCAGTCGCCATTGTCCCATATGGTACGGCTATGGAGGACGCCTTAAGTTCTTGGAGAGATTTGCCTACATCAACACCACTATTTATCCATTGACATCGATCCCGCTTCTCATATACTGTGTTTTGCCTGCTATCTGTTTGCTCACTGGGAAGTTCATCATCCCAGAGGTAAGCAATGACTGCTTATACATCCCCTTCTATAGAAAATGTTTGAGACAACCAAACTAACTAAATTAATTTTGGAATGCAGATTAGCAACTTTGCTAGTATTTGGTTCATCTCTCTCTTCATTTCAATTTTTGCCACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCATCGATGAGTGGTGGAGGAATGAACAGTTCTGGGTTATTGGAGGTATATCTGCGCATCTTTTTGCCGTCTTCCAGGGTCTCCTCAAGGTGCTTGCTGGTATCGACACCAATTTCACTGTCACCTCAAAGGCTTCTGATGAAGATGGTGACTTTGCTGAGCTCTACATGTTCAAGTGGACAACGCTTCTCATCCCACCGACGACCATCTTGATCATTAACCTGGTCGGTGTTGTCGCTGGTATCTCATACGCGATCAACAGCGGCTACCAATCATGGGGACCGCTCTTTGGCAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCACTTGTACCCCTTCCTCAAGGGTCTTATGGGTCGGCAAAACCGCACTCCGACCATCGTTGTTGTTTGGGCAATCCTTCTGGCTTCGATCTTCTCATTGCTGTGGGTTCGCATCGATCCATTCACCACCCGAGTCACCGGCCCAGATACCCAAACATGTGGCATCAACTGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024623

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA024623&oldid=50217"