BGIOSGA024648

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Revision as of 06:16, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024648| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024648, complete gene.| tag = P0519E0...")
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Gene Name

BGIOSGA024648

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024648, complete gene.

LocusTag

P0519E02.19

Ensembl Transcript ID

BGIOSGA024648-TA

Ensembl Protein ID

BGIOSGA024648-PA

Length

6808

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5424687..5431494

Sequence Coding Region

5431273..5431494,5430331..5430428),complement(5428865..5429906,5427361..5427873),complement(5426656..5426844
,5426449..5426582),complement(5424687..5424849

Genome Context

<gbrowseImage1> name=IndicaChromosome07:5424687..5431494 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:5424687..5431494 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGGCCAAGTCGTCGCGGTCGAGGCCGGCCGGGCATTCCGGGGTGTTCCCGGTGAGCGGCGCCGTGGGGGGAGGAGGAGGGGGCGGGGGCGGTGGCGGAGGAGGAGGAGGAGGCGATGCCGGGGTGCAGCTCGCCGACAAGCTCAAGATCTTCAAGACCGACAACTTCGATCCCGACGCGTACGTGCAGTCCAAGTGCCAGACGATGAACGAGAAGGAGATAAGGCATTTATGTTCTTACCTGCAAGATCTAAAGAAGGCTTCAGCTGAAGAGATGCGCAGAAGTGTATATGCAAATTATGCTGCATTTATCAGAACATCAAAGGAGATATCAGATCTTGAAGGGGAACTGCTATCAATAAGAAATCTACTGAATACACAAGCAGCTTTAATCCATGGTCTTTCTGAAGGAGTTCAAATAGATTCCTTGACTTCAAACACTGAAGGTTCTGCAGAAGACGATATATCCAATGTTGAAGACCAGGAACCTTCAGAAATACAAAAATGGTCTGCAGATTTCCCTGACATGCTTGATGTTTTGCTAGCTGAGAGAAGAGTGGATGAAGCACTTGATGCACTAGATGAAGCGGAACGACTTGCTTCTGATGCAAAACTTAAACAGACTCTAACCGCAACTGAAATTGCAGCTTTGAGAAGGGCAGTTTCTGATAATCGTCAGAAGTTGGCAGATCAGCTTGCTGAAGCTGCTTGTCAGACTTCTACTCGTGGCATTGAGCTTCGTGCTGCAGCTTCTGCTCTCAAAAGGCTTGGTGATGGCCCTCGAGCTCACAGCCTGCTACTCAATGCACATAATCAAAGGCTTCAATGTAATATGCAAACTATACATCCATCTAGCACTTCGTATGGTGGGGCGTACACTGCAGCACTTGCTCAGCAAGTCTTTTCAGTGGTAGCTCAGGCACTCAGTGACTCTGTAGAAGTTTTTGGTGATGAGTCATGTTATGCATCTGAACTGGTTACATGGGCTACGAAGCAGGTTATGTCCTTTGCACTCTTGGTAAAGAGGCATGTGTTGTCCTCTTGTGCAGCTGCTGGAGGTTTGAGAGCAGCTGCCGAATGTGTTCAGATATCACTTGGTCATTGCTCCTTGTTGGAAGCTCGTGGTCTGTCTGTTGCAGCTGTTCTTCTGAGGCAATTCAGGCCCAGTCTAGAGCAAGCATTATATTCAAACATCAGAAGAATTGAAGAGAGTACCGCTGCACTAGCTGCAGCTGATGACTGGATTCTCACATATCCCCCAACTGGCATTCGTCCTTTAGCTAGATCATCTGCTGCTAATTTGGCTCTTCAGCCAAAGCTCTCCAACAGTGCTCATCGTTTTAACTCGATGGTTCAGGAGTTCTTTGAAGATGTTGCGCCGCTGCTTAGCTTGCAATTAGGTGGTTCTACAATGGATGACATAACTAAAATTTTCAATTCATATGTCAATTTGCTCATAAGTGCTTTACCTGGGTCAATGGAAGATGAAGCTAACATAGATGGTTTAGGAAATAAGATTGTTAGAATGGCAGAGTCTGAAGAACAGCAACTGGCTTTATTAGCCAATGCGTCTTTGCTAGCTGAGGAGTTGCTACCTAGAGCAGCTATGAAGCTATCATCAATGAACCATTCTAGTATGGATGATCTGCGTAAAAGAGGCTCAGATAAACAGAACCGTATGCCTGAGCAACGTGAATGGAAACGGAAATTACAACGCATGGTGGACAGATTAAGGGATAGTTTCTGCAGGCAGCATGCTCTTGAACTTATATTTACAGATGAAGGTGAGACCCATCTCAGTGCAGACATGTATATTAGCATGGACAATACTGTTGAAGAGCCAGAATGGGCCCCATCTCTTATTTTCCAGGAGCTGTATGCAAAGCTAAATAGGATGGCCAGTATTGCGGCAGATATGTTTGTCGGCAGAGAAAGATTTGCTACTCTGCTAATGATGCGACTCACTGAGACAGTCATACTATGGCTCTCAGAGGATCAAGCCTTCTGGGAAGAGATTGAACAGGGACCGAAGCCTTTGGGTCCCCTTGGCCTTCAGCAATTCTACCTGGATATGCAATTTGTAATTATCTTTGGACAAGGTCGATTCTTGTCTAGGCACGTCCATCAAGTCATATTGGATATTATTGATAGAGCAATGGCTGCATTTTCAGCTACTGGAATGAACCCTGACAGTGTCCTCCCGGGTGACGATTGGTTCATGGATGTTTCTCAGGAGGTTGTCAGCATGATTAGTGGAAAGGGTAGAGCTGCCAATGGAGACAGGGAGATAAACAGCCCTACTGCCTCAATCTCAGCGCATTCCATGTCATCTTTCAGATCCCATGGCAGCTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MASAKSSRSRPAGHSGVFPVSGAVGGGGGGGGGGGGGGGGDAGVQLADKLKIFKTDNFDPDAYVQSKCQTMNEKEIRHLCSYLQDLKKASAEEMRRSVYANYAAFIRTSKEISDLEGELLSIRNLLNTQAALIHGLSEGVQIDSLTSNTEGSAEDDISNVEDQEPSEIQKWSADFPDMLDVLLAERRVDEALDALDEAERLASDAKLKQTLTATEIAALRRAVSDNRQKLADQLAEAACQTSTRGIELRAAASALKRLGDGPRAHSLLLNAHNQRLQCNMQTIHPSSTSYGGAYTAALAQQVFSVVAQALSDSVEVFGDESCYASELVTWATKQVMSFALLVKRHVLSSCAAAGGLRAAAECVQISLGHCSLLEARGLSVAAVLLRQFRPSLEQALYSNIRRIEESTAALAAADDWILTYPPTGIRPLARSSAANLALQPKLSNSAHRFNSMVQEFFEDVAPLLSLQLGGSTMDDITKIFNSYVNLLISALPGSMEDEANIDGLGNKIVRMAESEEQQLALLANASLLAEELLPRAAMKLSSMNHSSMDDLRKRGSDKQNRMPEQREWKRKLQRMVDRLRDSFCRQHALELIFTDEGETHLSADMYISMDNTVEEPEWAPSLIFQELYAKLNRMASIAADMFVGRERFATLLMMRLTETVILWLSEDQAFWEEIEQGPKPLGPLGLQQFYLDMQFVIIFGQGRFLSRHVHQVILDIIDRAMAAFSATGMNPDSVLPGDDWFMDVSQEVVSMISGKGRAANGDREINSPTASISAHSMSSFRSHGSS</aaseq>

Gene Sequence

<dnaseqindica>1..222#1067..1164#1589..2630#3622..4134#4651..4839#4913..5046#6646..6808#ATGGCGTCGGCCAAGTCGTCGCGGTCGAGGCCGGCCGGGCATTCCGGGGTGTTCCCGGTGAGCGGCGCCGTGGGGGGAGGAGGAGGGGGCGGGGGCGGTGGCGGAGGAGGAGGAGGAGGCGATGCCGGGGTGCAGCTCGCCGACAAGCTCAAGATCTTCAAGACCGACAACTTCGATCCCGACGCGTACGTGCAGTCCAAGTGCCAGACGATGAACGAGAAGGTGAGTTGTTGTCCTCTCTGATCCGGCCGTGGTTGAGCTCGCCCCTCGATCCGTCCTCCGCCTTTCGTTGGATCCCCCGGGGGGTGGTGGGATTCCGCGTGTGGGTTGGCATTTTGCGCTTGCGTTGCGGGGGAGGTTGGTATGATGTGATCCTGAATTCGATGGAAGGTAGGAGATGCATGATTTGGGAAGAGGGGAAGGGGGGGGGGGGGTGATGTGATTGGTGTTGTAATATAGGCGAAATGGGTTGTAATGATGCAGGTTAATTTCATCCCTGGATGTTTGACTGGTGGTTAGAGGGCTAAATTGTTAACAATTGAGGACTTTTTGTTGTTTGTGGTAATGCGAATTTAAACCTAATTCAAAATTGCTGTTCATTTTAGTGATGAAATGGTTTTCGCTATCTGTGAGAATATGCTAGATAACAACCTCGTTTCTCGCTTTTGTCGATTGACTTGTACCGAGCCAGTCTGATCTCCTTTATACTTACCTCAAACAACGAGTGAAGTCGAGATGTTGATGAGAAAGGGGCGAGTCTCAAGGCCAAAGAGTGCTGTGCTGATTGCTCTGGTGGAACTTTTTTATTCATTAATTGCCAAGTACTGTTGTTTTGTCTTGTGTAATTGTATTATCCACGAAAACTGAAAACCGGAACATCTGGAGTTCAACTATGCATTTTTATCTGCAAATCGGAATAAGAGGTTAAGAAATGCTTTGGTTTGAATATAACGCCATTTTGAAGAATGCAGTATAAAGCAAATTCTATGTGTTTTAGCTTGACTCCAGATAGGTCGTCAAAGTGCCTGCAAATGTAACTGATCAAAACAATTCAAATCCATTTCAGGAGATAAGGCATTTATGTTCTTACCTGCAAGATCTAAAGAAGGCTTCAGCTGAAGAGATGCGCAGAAGTGTATATGCAAATTATGCTGCATTTATCAGGTATGTCAACAACCTTAAGTGCACTTTCCTTAGTATTTTGTGTTAGATACAATTTTTAAATAGCCTGATGTACCCCTGGTATAAGCTCTAATAGTTCTCTATCACGTGAATACGGTATAATATTTCTAAGTAAGGCTTATAGCTTTGGTGTCAGAGGCATGGTGCTGCTGTGTATTTTTGTTTGTTTTTCTGATGTGTGAGTTTGGTTACAAACCAAGAAGTGGGAGTTTCAGGCTGTGAACTACTTGTGACTTAGAATGCTGTAACAATGTTTAGGGTCTTGTATTCCTAAAATAAGGGACTGGTTCTTTGCCCTTTGGTTCTAAAAAATAATCATTTTTTACCCATTCTGTTTTCTTCCCCTTAACTTAGAATTTATTTGTTTCTACTTATCTTTTGATACTGATGATCTCTTGGTCACCAGAACATCAAAGGAGATATCAGATCTTGAAGGGGAACTGCTATCAATAAGAAATCTACTGAATACACAAGCAGCTTTAATCCATGGTCTTTCTGAAGGAGTTCAAATAGATTCCTTGACTTCAAACACTGAAGGTTCTGCAGAAGACGATATATCCAATGTTGAAGACCAGGAACCTTCAGAAATACAAAAATGGTCTGCAGATTTCCCTGACATGCTTGATGTTTTGCTAGCTGAGAGAAGAGTGGATGAAGCACTTGATGCACTAGATGAAGCGGAACGACTTGCTTCTGATGCAAAACTTAAACAGACTCTAACCGCAACTGAAATTGCAGCTTTGAGAAGGGCAGTTTCTGATAATCGTCAGAAGTTGGCAGATCAGCTTGCTGAAGCTGCTTGTCAGACTTCTACTCGTGGCATTGAGCTTCGTGCTGCAGCTTCTGCTCTCAAAAGGCTTGGTGATGGCCCTCGAGCTCACAGCCTGCTACTCAATGCACATAATCAAAGGCTTCAATGTAATATGCAAACTATACATCCATCTAGCACTTCGTATGGTGGGGCGTACACTGCAGCACTTGCTCAGCAAGTCTTTTCAGTGGTAGCTCAGGCACTCAGTGACTCTGTAGAAGTTTTTGGTGATGAGTCATGTTATGCATCTGAACTGGTTACATGGGCTACGAAGCAGGTTATGTCCTTTGCACTCTTGGTAAAGAGGCATGTGTTGTCCTCTTGTGCAGCTGCTGGAGGTTTGAGAGCAGCTGCCGAATGTGTTCAGATATCACTTGGTCATTGCTCCTTGTTGGAAGCTCGTGGTCTGTCTGTTGCAGCTGTTCTTCTGAGGCAATTCAGGCCCAGTCTAGAGCAAGCATTATATTCAAACATCAGAAGAATTGAAGAGAGTACCGCTGCACTAGCTGCAGCTGATGACTGGATTCTCACATATCCCCCAACTGGCATTCGTCCTTTAGCTAGATCATCTGCTGCTAATTTGGCTCTTCAGCCAAAGCTCTCCAACAGTGCTCATCGTTTTAACTCGATGGTTCAGGTAATGGTTTTATCCCTTATGGTTGAACAATACTAATTGATCTTACTATTTTTCTTGTTCAGCAAAGTGATGGTGATATATCTCTATGAGCTTGTATCTGCATCATTTAATTGCATGTATTTGTTTGCTGGACTAGGTTTAGTTTGAAACAGATTATTGAGCAGATCATCTATTTGATTATATGGATAAATCAAATATTCTGATAAATAACCTTAACAAATAACTTAAAACAAGTAGTCTAAGCAAATACAATAGAAGAATTTTCTTTGAGAAAATGTAATTTTCAAAGCTTGGAGTAAATAATCTGTTTCAACAATCTGGTAAATAATCTGCAAAAAACTAAGGCTAAAAATTACCATGGCCATAATATGTCCTTTTCCCAAAATCTTAACTCTCAAGCATTCTTCATAACTTTAGCTCCATTATCAGTTCCATGATGTAGTAAGATATGTGACTTGTGCCCATCGGATCGTAGGAAATATAGCCTTTACAAATGAGAACTTATGGAAGAGAAACCCTGTTGGAGCATAGGGATTTCATAGGAATCCTGTTGGGATTGTATTATTCCCTGCCGAGTTCGTGTGGAATTCCTTCATTCGCAAAACCAGTTTCAGACTGTTAGGGTGCAGTACTTTCGATGATTCATGATTGAAGAGGACTTCTCAAGGAGATTGACACACACCTAGGATTTGCTAGTTTGACTTGACACCATCAATGATAACTATACTAATTTGTGTGAGCTTGGGGTTGTTTAATTCAATGGTTTATTTGTGCTTTCATGGGTTGGAACTTGGAAAATTGGATTAGTCAGGTGACAAGTTATTCTTAAAAATAGGCATTTGCATCTATACTTATGCATATAGGAGATATCTAACATGAACTACTTCCGTTGCATTCAGCTTCTTTTGGAGTGACGCTTAACCAGTATCTTTACCCTTTCTGGTGTAATATACACTGTGTCCTCAATCTTGGTATTGCATGTAATTTGCAGGAGTTCTTTGAAGATGTTGCGCCGCTGCTTAGCTTGCAATTAGGTGGTTCTACAATGGATGACATAACTAAAATTTTCAATTCATATGTCAATTTGCTCATAAGTGCTTTACCTGGGTCAATGGAAGATGAAGCTAACATAGATGGTTTAGGAAATAAGATTGTTAGAATGGCAGAGTCTGAAGAACAGCAACTGGCTTTATTAGCCAATGCGTCTTTGCTAGCTGAGGAGTTGCTACCTAGAGCAGCTATGAAGCTATCATCAATGAACCATTCTAGTATGGATGATCTGCGTAAAAGAGGCTCAGATAAACAGAACCGTATGCCTGAGCAACGTGAATGGAAACGGAAATTACAACGCATGGTGGACAGATTAAGGGATAGTTTCTGCAGGCAGCATGCTCTTGAACTTATATTTACAGATGAAGGTGAGACCCATCTCAGTGCAGACATGTATATTAGCATGGACAATACTGTTGAAGAGCCAGAATGGGCCCCATCTCTTATTTTCCAGGTACAAACAAATGAGAACTTTTCTTTTTTTTTTCTTTTTCTTTCCTACATAGATTAACCCAGGTCCTTGTGACCACCTTTTGAACAGCTTGTTTACATCCATACGCTTATCTTTTGCCACATAAATCTTTCTGCTTTTAGAATTTGTCCATGTATCTCCCAGGAGAAAAACGATTACTCACATGTGTATTCACAATATTCTCTGCTTGAAACAGCACCTCAGTGATGACGTGTTAAATTCTAGATTTGAGATGATTTTGATATCTTCTACCATAATTGCTTGGATAAGCTCGTAATAGTCTTATTCAGTTTTGTGGTGATATAACAGGACGATGTTGTAATTAACCAATGGAATTAAATGGCATCTTTGTTTGTGACTGTCAGTTCATATTATTAGATATAAGCTGTACTAAAATGTTATTCTTCATGATGATGGCTCTCTGAATCAATGTAGATATTAGGATTCTAGAACTTGCCCAAAAGTAGTATTTTGTAGCTGATCTGCTATTCATTGCAGGAGCTGTATGCAAAGCTAAATAGGATGGCCAGTATTGCGGCAGATATGTTTGTCGGCAGAGAAAGATTTGCTACTCTGCTAATGATGCGACTCACTGAGACAGTCATACTATGGCTCTCAGAGGATCAAGCCTTCTGGGAAGAGATTGAACAGGGACCGAAGCCTTTGGGTCCCCTTGGCCTTCAGCAAGTAAAGCTCCTTTCTTCTTCTTCTCCTTTCATGCTATCAGCTGTGATTTTCATTTTTCATCCCTTATCTGCAGTTCTACCTGGATATGCAATTTGTAATTATCTTTGGACAAGGTCGATTCTTGTCTAGGCACGTCCATCAAGTCATATTGGATATTATTGATAGAGCAATGGCTGCATTTTCAGCTACTGGAATGAACCCTGACAGGTACTACACTATTGGTTCAGAAGTAAATGCTGCTGCTTGATAATTAGTTCTGCGATTTCAGCAAAAATGCTAATTGCTGATTCATCACTGCAGTTGCGTAGAACAATAGATGCTCTGGTTTATTTTGCCTTACAAAGTTCAGATTGCATCCTAATGCTCTCGTAGTCAAAATGATCTTAGGGATGAATGATAAATAAATAGCCTAATGCTCTTTCCCAGTGAAAACTATGAAGAATGAAGGATAGATAGATAACCTTTTGTAGTTCTGTCCATACCTTCTGCCTTTAGTTTCTCTTGATGTTTATTAGGTAGCTATCATTTTATAGTTTTGTCCATACCTTCTGTCTTTAGTTTCTGTGCATGGTCTCCCTGTAGCTGCTCCCATGAAGAACTAGGGTTTCCACAGCAATACTTGGTTTGATTAGCACCTAAATTCCTGCATAGTTTCCAAAAAAAAAAACCTGTCAGGGCCAAATCGTTTACCTCTTTAAGGATGGGTGATACGCATGGCTTTGACTGTATTGTTATTTGCAAATACATTATTGTGACGCCCCACACTCTTCGAGGCCGGGCCCTCTCTAGATCTGGCAGCTATCCTAGGACATAGACTATCCTCACACACCAACACAAGTCTTTCCTGCACACTTTGTCCTCACTCGTGCGCGCCCGGGAAGAATTTCCCGATCAGTCACCCATCCTGAAATTGCTTCAGGGTAAGCACGCTTAACCTCAAAGTTCTTTCGAAACCGGCTTCCGGAAAAGAAGTTGCAACTTGTTGATATGAGTATTCTATTAATCCTATTCAGCCCTGGGCCAGGATATCACAATTATTTAAAATGAACAAAACCATTTTACCTTCCTCAGCTCTTCCTGGAGAGTCAAAAAAACACCTACAGGCCACAATTACAAAACTGTTCACTTTAAACCCATCAAGTATCAAAAGTAGTGAGATGGGGTTTGGGGACAAGGGCATTAAAACTGTTTGTTACAAAATAGAATTGCATATTAAGCAAATTTTATCTAATATTTTGGAATCCAAACAAAGTTCTCCGCTGCTAAGATTCTGCATAGCAGTTATCATGCTGAAAAATGATGAAATTGCACTTTTGCTCCTTGAACTTTTTTTTTTTGAGAACTTGCTCCTTGAACTTGAAAGCTACGTGTCCACATAACTCAACATTTGTTGACACATAGACCAGTGATGTATCACAAAGGCACAAACCATACGGCTATCTGTAGGCAATGTTTTACTCACGTTGACGGATGTAGGAATCCAGTAATTTGTAGGGAATTATTTTGTGAAAATATAGCTGTTTGACTTATAAGTCTTTTATGACATCTATGTCAACTTTATTCTTAAGTCTTAACTTGTACTTCATACTTACATAGTAACCAGGCTGCCTCCTAGGCTCCTAGTTCCTTTACTGCAGTATTACTACAAAACCATGTTTGGATCGCCTCGCATGTCCTCTTGGAAGTCAATTGCCTGTGATATTGGGTTACTTTTTTTTCTCTGTAGCAGGGTCCTCAAAGAAGCTGCTTCTACAGGGAGTGTGGACATGCAAATCTGAACTAACATTTTTCTGCATCTTTGTGCAGTGTCCTCCCGGGTGACGATTGGTTCATGGATGTTTCTCAGGAGGTTGTCAGCATGATTAGTGGAAAGGGTAGAGCTGCCAATGGAGACAGGGAGATAAACAGCCCTACTGCCTCAATCTCAGCGCATTCCATGTCATCTTTCAGATCCCATGGCAGCTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024648