BGIOSGA024679

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Revision as of 06:16, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024679| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024679, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA024679

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024679, complete gene.

LocusTag

OSJNBB0003E08.28

Ensembl Transcript ID

BGIOSGA024679-TA

Ensembl Protein ID

BGIOSGA024679-PA

Length

6860

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4895111..4901970

Sequence Coding Region

4901911..4901970,4898479..4900461),complement(4898345..4898402,4898067..4898215),complement(4897620..4897706
,4895433..4895561),complement(4895111..4895233

Genome Context

<gbrowseImage1> name=IndicaChromosome07:4895111..4901970 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:4895111..4901970 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCCGCGGCGAGCTGGACCGCCGAGGACGACGTCCTGCTGAAGAACGCCGTCGAGGCTGGTGCCTCATTGGAATCCTTGGCTAAAGGAGCTGTATGTTTTTCCCGCAAATTCACTCTTCAAGAATTACAGGATCGTTGGTCCTCATTGCTGTATGACTCAGAGACCTCAGGACAAGCATCTGCCCTCATAGTCAAGTATGAGACTGAACTTTCAACCTCCAACCCGACCAAAGCACATAAACTTTTCTACGTGAGGAGAAAACATCTTTCTCTCAGGAAGAGGAAAATTGAGAGTGTAAAGAATCAGTATTATGCAATGAGAAAGAGAATCTGCCATGATCCATGTTTGGCTGCAGATTTTGGTTATGTTATCACACCCTGTTCATGCCCTGTAGGTAGTGATTGTGTATGTGATGGATTATTTAACTTGTTGGAAGATAATCATTTGATCCATAACGTTAATCAAGCTCCAGATGTTGTAAATGGCTATGGTCACATAGGCGAAAGCTATGCTGATGGACAAGATGTACATGCCAAAGATAATGGACATTATATATCCCATAGAAGGCATGATAAAGCTGCTGGGACAGTGGCAAGTGATGGAAGCACTAATTGTGAAAGTGCAAATGGCTGTTCTGATGTAGGTAAGTTATATGGATACAACTTCATGCCAAAGAACATTCAGTCAAGTGAAAGGAATATTGCCTCTCCAAAGGACCTTTCTGATGTCCAGGACTGTGTGCAGCCTCAGCAACCAATTCTTTGTGAAGAATCAGCCAATGGAATGACAGGGTTAAAGGCTTTACTGAATACTGATCAAGATTGCATAAAACAGAACCAGTTTTCTGGTAACAGCAATGAAATATTGCAAGACCCAGGCTCGCTAAAAGCAATGAGTGAACATTGGTGTTCTCAGGCACCTAGTGCTCCTACTAGGAAGAAGTTTCAGGGTGTTAATGCACCTGACATGCTGACAGATGTGCATCACAAAGAGCAAGAAATTCTTGCCTTTTCTGATGACAAGAAAAAGGAAACTACTAACATTGACACATTTTCATGCAAGGTGAATGTGGAGAATGGAATGTCTGGATCTGGCTTAGACGATGCAACAGAAGGTGAAGTTATGCACTCATGCTTAATGGATGCCAGTCAGGGTGAAGACTTTGAGCTACTTAATAGCGAGAATATTTTGGATTCTTCTCTTGACCCAAATCTGGAAGGTTTAGGCGATCGACATGCTAATGTTATTCTGAAGGACATCTCCAAAGAGCACCTTCTGGACATTCCTCATGTAAGCAGTGCCTGTGGTAACAACACAGATCCAATCCATGAGAAGCATGATGTGGCAGATATTTCTGGAGTGGACATGATATACACAACAGAAGTGCCTTTTCCTTGTGCTGGTATTGTGTGCATATTAAACACCGAAGATCCTGAAATCCCTTGCAATGATGATATCTTTACACCTGGGCCTGTAGCATCCACCTCTACTTGTGACCAGAATTCACAGCACAATATGCATTTGGTTTCTGCCAAACCTATTCCTCCACTAAATGCTGCTGACTTGAATCACACCGACTTGGTTAGTGATGTCCAACCATTGTTACTTACAATGAAGTTGGAACCTTACACCTTGGAACAAAAGGAAACTTTGGTGGGTCTTAATGAATCTTGTACCGTAAGAAGCAAGTCACCTGTTATGCCTGTTGATGCTAGCAATGCAAATGCATGCACATCAACTTTCCATTCTGCTGCAGAATTTGTTAAAAAATCTACATGTGGTTTAGTGCAACATGAATGTTTTGATAACTTGGGGAGTGTGTCTTTGGATGAGTGTATTGGAGTGCTTGATGAAATGAATTCTAAGGTTCCTGATGAGTCAGGAATAAGTTGTGATGCTACTACCCAAAACAGCATTTCAGCGCATGCATTGCCAGATGTGGAATTTCTTAATCCCATAACAACCACTTCAAGCCCAGAAGGGGGAGGATCTGACAGTGAGGACGGTATTCCAAACTATTTCGACATAGAAGCTTTGATACTTGATCAGGATTTAATTCCATGGGATCAAGAATCTGATTTCATCCAGCTCGAAGTTTCCAGGTTTCAGTCTCTTGAAAGTAGGAAAGACTTGATAAGATTAGAACGAGGTGCCCGCTCTAATACAAACAGATCTATTATGTCCCATGGTGCTTTTGCAGTTCTTTATGGCCAGCATTTGAAATACTACATAAAGGATCCAGAGGTTACACTTGGGAGAGAAACAAGTGAGGAACATGTCGACATCGATTTGGGAAAAGAAGGAAAGGCGAATACAATATCCCGTCAACAGGCAATTATCAAGATGGATAAAGGTGGATCTTTCCACATAACGAATATAGGAAAAGCTCCAATCTTCGTCAATAGCAAAGAAGTTCCATGCAACGAATGCACTCACTTAATTTCTGATGCATTACTTCAGATAAGGCACATGAAATTCATTTTTCACATCAATCAGGATGCCGTGAGGCAACATATAGTTCGCAGTAGGAGAGGAACCTCCCAAGGCAAGTACGCAGTATTTAATTGGGATGAAAAGCCATGA</cdnaseq>

Protein Sequence

<aaseq>MSAAASWTAEDDVLLKNAVEAGASLESLAKGAVCFSRKFTLQELQDRWSSLLYDSETSGQASALIVKYETELSTSNPTKAHKLFYVRRKHLSLRKRKIESVKNQYYAMRKRICHDPCLAADFGYVITPCSCPVGSDCVCDGLFNLLEDNHLIHNVNQAPDVVNGYGHIGESYADGQDVHAKDNGHYISHRRHDKAAGTVASDGSTNCESANGCSDVGKLYGYNFMPKNIQSSERNIASPKDLSDVQDCVQPQQPILCEESANGMTGLKALLNTDQDCIKQNQFSGNSNEILQDPGSLKAMSEHWCSQAPSAPTRKKFQGVNAPDMLTDVHHKEQEILAFSDDKKKETTNIDTFSCKVNVENGMSGSGLDDATEGEVMHSCLMDASQGEDFELLNSENILDSSLDPNLEGLGDRHANVILKDISKEHLLDIPHVSSACGNNTDPIHEKHDVADISGVDMIYTTEVPFPCAGIVCILNTEDPEIPCNDDIFTPGPVASTSTCDQNSQHNMHLVSAKPIPPLNAADLNHTDLVSDVQPLLLTMKLEPYTLEQKETLVGLNESCTVRSKSPVMPVDASNANACTSTFHSAAEFVKKSTCGLVQHECFDNLGSVSLDECIGVLDEMNSKVPDESGISCDATTQNSISAHALPDVEFLNPITTTSSPEGGGSDSEDGIPNYFDIEALILDQDLIPWDQESDFIQLEVSRFQSLESRKDLIRLERGARSNTNRSIMSHGAFAVLYGQHLKYYIKDPEVTLGRETSEEHVDIDLGKEGKANTISRQQAIIKMDKGGSFHITNIGKAPIFVNSKEVPCNECTHLISDALLQIRHMKFIFHINQDAVRQHIVRSRRGTSQGKYAVFNWDEKP</aaseq>

Gene Sequence

<dnaseqindica>1..60#1510..3492#3569..3626#3756..3904#4265..4351#6410..6538#6738..6860#ATGTCGGCCGCGGCGAGCTGGACCGCCGAGGACGACGTCCTGCTGAAGAACGCCGTCGAGGTAAGGATTGCCCCCACCCACCTAATTTCCGACCTATTCCTCTCCGTGTCGCCTCGAAACTCCTTCTCCATGGCGGAATTCCGCGGCTGCTGGGGTGCCCGTGGCCCGCGATTCGGGGGGTGAGGGCGTGCCCGATGCGCCGCGCCGCGCCCGCGCGTCTCGTGCGGAGAATTTCGAGAATGTTTCTGAGCCGCTCATTTCAAGTGGACTTTGTAGTTGAGGGTTTTGTTCTGTTGTAATGGGAATTTTCGAATGTTTGGTTGGCTAATCGATGCAGTTTCTCAAGTTCAGTTTGATCAGAGCCACTTCCTAACTGGCAACTGAGATGGGTGTAGAGATTGGGGTGTCTGCAGGTTTTATAGAGTTTAGAATGTTTCTGAGCAGCTCTAATTTCAAGATATTTTTTACTGCTACCGCTAGTCTACTGCTAATACTGTGGATAGGACTTCCTGAATGGTTCCATTTGTGGATTTGGGTAGTTTGGTGGTAGTGTGAGATGTTGACGCATTCGAGTATCTATTGAATAATTGGGTCATCCAATTCAATTCAATTCAATTCAAGTTTGTTGGAATGCTCAACTTGTGTTGATACTTGATACATTAGGCTACTATTGTGTTCGCAAAAATATTAGGTTACTATTCTGTTGTTTATTGTCCACTTTTTCGTCAATCTACTGTATGGTTTAACTTCCGTAAGAACCTTGTAGGGGATTTTTTTTTTGTCAAACTGTTGTTCTTGTGAAGTTGCATAATTAAGAACCTTGTAGGGGATTTTTTTCCCGTCAAACTGTTGTTCTTGTGAAGTTGTATAGTTACTACTGGGTCACCTAGTATCACCAAATCCCAGCAAGTTTTGTCCTAAATGGTCCTCAATTTGATTTAAAATGTTGCAGTGCTTTACTTGCGTTTGATACATTTGTTGCTTAGTCCTTATAGCATCAATCCTGTTCTGACTTTTGAAACTTACAGTACCCAGTTCACTATAAGACTGTTTTAAGAAACATTGGTATTATGATACATGTATTAATTGTGAAATGTTACTATATGAATCTATACACCAAATTGAGGTTCACTATAGTCACACCCTCACTCCATTTTGGGTCCGCCTTGAGCATCATTTCATTGTGGCAACCCTTGAAACTATTGGCATCGCTTTGTTCTTTGATGTTTCTTGGGTATATAGACTCAATGCTACATCTACAACAAATAGTTATAAACCAAGCCCTAGTACCTTCATGCATGACCAGCGCCACTGTTGGTGGGTTTATGAGTTGCAATTAGCTTGGCTGCAGCTATTTGGTCATGTCAGCCACATGACTATAATGTTAGGATGGAATTGGATGGGACTTGGGAGTCCATGGTCCATACTTTTTACTGTTGGGAAGACTTTCCCACTTTCATATGCCATCTTATTTGTATCCTGTTAACTTCATCTTTCTTGTTCTTCTAGGCTGGTGCCTCATTGGAATCCTTGGCTAAAGGAGCTGTATGTTTTTCCCGCAAATTCACTCTTCAAGAATTACAGGATCGTTGGTCCTCATTGCTGTATGACTCAGAGACCTCAGGACAAGCATCTGCCCTCATAGTCAAGTATGAGACTGAACTTTCAACCTCCAACCCGACCAAAGCACATAAACTTTTCTACGTGAGGAGAAAACATCTTTCTCTCAGGAAGAGGAAAATTGAGAGTGTAAAGAATCAGTATTATGCAATGAGAAAGAGAATCTGCCATGATCCATGTTTGGCTGCAGATTTTGGTTATGTTATCACACCCTGTTCATGCCCTGTAGGTAGTGATTGTGTATGTGATGGATTATTTAACTTGTTGGAAGATAATCATTTGATCCATAACGTTAATCAAGCTCCAGATGTTGTAAATGGCTATGGTCACATAGGCGAAAGCTATGCTGATGGACAAGATGTACATGCCAAAGATAATGGACATTATATATCCCATAGAAGGCATGATAAAGCTGCTGGGACAGTGGCAAGTGATGGAAGCACTAATTGTGAAAGTGCAAATGGCTGTTCTGATGTAGGTAAGTTATATGGATACAACTTCATGCCAAAGAACATTCAGTCAAGTGAAAGGAATATTGCCTCTCCAAAGGACCTTTCTGATGTCCAGGACTGTGTGCAGCCTCAGCAACCAATTCTTTGTGAAGAATCAGCCAATGGAATGACAGGGTTAAAGGCTTTACTGAATACTGATCAAGATTGCATAAAACAGAACCAGTTTTCTGGTAACAGCAATGAAATATTGCAAGACCCAGGCTCGCTAAAAGCAATGAGTGAACATTGGTGTTCTCAGGCACCTAGTGCTCCTACTAGGAAGAAGTTTCAGGGTGTTAATGCACCTGACATGCTGACAGATGTGCATCACAAAGAGCAAGAAATTCTTGCCTTTTCTGATGACAAGAAAAAGGAAACTACTAACATTGACACATTTTCATGCAAGGTGAATGTGGAGAATGGAATGTCTGGATCTGGCTTAGACGATGCAACAGAAGGTGAAGTTATGCACTCATGCTTAATGGATGCCAGTCAGGGTGAAGACTTTGAGCTACTTAATAGCGAGAATATTTTGGATTCTTCTCTTGACCCAAATCTGGAAGGTTTAGGCGATCGACATGCTAATGTTATTCTGAAGGACATCTCCAAAGAGCACCTTCTGGACATTCCTCATGTAAGCAGTGCCTGTGGTAACAACACAGATCCAATCCATGAGAAGCATGATGTGGCAGATATTTCTGGAGTGGACATGATATACACAACAGAAGTGCCTTTTCCTTGTGCTGGTATTGTGTGCATATTAAACACCGAAGATCCTGAAATCCCTTGCAATGATGATATCTTTACACCTGGGCCTGTAGCATCCACCTCTACTTGTGACCAGAATTCACAGCACAATATGCATTTGGTTTCTGCCAAACCTATTCCTCCACTAAATGCTGCTGACTTGAATCACACCGACTTGGTTAGTGATGTCCAACCATTGTTACTTACAATGAAGTTGGAACCTTACACCTTGGAACAAAAGGAAACTTTGGTGGGTCTTAATGAATCTTGTACCGTAAGAAGCAAGTCACCTGTTATGCCTGTTGATGCTAGCAATGCAAATGCATGCACATCAACTTTCCATTCTGCTGCAGAATTTGTTAAAAAATCTACATGTGGTTTAGTGCAACATGAATGTTTTGATAACTTGGGGAGTGTGTCTTTGGATGAGTGTATTGGAGTGCTTGATGAAATGAATTCTAAGGTTCCTGATGAGTCAGGAATAAGTTGTGATGCTACTACCCAAAACAGCATTTCAGCGCATGCATTGCCAGATGTGGAATTTCTTAATCCCATAACAACCACTTCAAGCCCAGAAGGGGGAGGATCTGACAGTGAGGACGGTATTCCAAACTATTTCGACATAGAAGCTTTGGTATACTTCTTTCTTGGCTGAATTTATAAGGCTTTGTTTACTTTGGTGCTTCTGACATTTCAAACATCTGCTGCAGATACTTGATCAGGATTTAATTCCATGGGATCAAGAATCTGATTTCATCCAGCTCGAAGGTAAATGTAGTTGAGATCAAGGCTGTTGTGTTTCAGGATTTTCTTAATTGGCAACGGGGTCATATGCTTAGAAGCTGAACTGGGGCTTCTTTATTAGTGTTATTCACTTATTTGCTTTTGCTTGATCAGTTTCCAGGTTTCAGTCTCTTGAAAGTAGGAAAGACTTGATAAGATTAGAACGAGGTGCCCGCTCTAATACAAACAGATCTATTATGTCCCATGGTGCTTTTGCAGTTCTTTATGGCCAGCATTTGAAATACTACATAAAGGATCCAGAGGTAAGCATAAGCAATATTTAATTTAATCTTAATTGCATAATGCAGTAGCAGATGTAATGGTTAGGTGAAATTAAACCCACGTGTATATTCCTTATTCATGGAGAACTAAAGAGTTCTATCTCTGTAGTGAACAGCAAAGGCATTTTTGAGTCAAGAGAATATAACACCTTACTGTTATTTGCCCAATCATATCAACATATGTTTTGTTGTCTTATTTTACTACCAGTTGAATTGTTTAATACGGTGTTTAGCTAACAAGATCATCATGCAGGCTAAGATTGTCATGGTTAATCGATATGTTATAAAACAATTCTTTGATATGATGATACCATCTTTGTTTTTTCTTCTCTTCTGATGCAGGTTACACTTGGGAGAGAAACAAGTGAGGAACATGTCGACATCGATTTGGGAAAAGAAGGAAAGGCGAATACAATATCCCGTCAACAGGTATTTTTTTTTACAAAAAAAAATGCTAATATGGCAAACAGCCTTGGACGGGTGGAGTTTTTATGGAGGTCCTTATTTATTTATTTATTTAGGGACCATTCTCTGTCTTTCCTTCTGTCACATGTCATTTTTCAGACATGGTCGATAACGTTCAACAAAAATAATTATGTACAAGAAAATATTCCCGGGACCTTTTGAACCACTGATATTTCTGTAAAGTCTTCCGTTTTAGTACTCTATGCAAATGACCCTAATTAAGCTTGTGATAATACTAGGATAAGTTGACTATAGCTCCTCTATATGCAAACATTTGAAAATCTTTCCTCTTGTGATACAATCCTTCATATCCGTTTGCTTATTTCAGATCTTATGATTTAAAACCAGGAACTTTATTAAACTGTTACATTGTGCATTCAGGCTTCTGGATATTTGCTTGGAGTAGTGTCATTTGCACCTTATTCCTGTAAATATTAGCAATGGCATCTCTGCTTATTTTCTTTTTGGGGAGTATCCTGTGTAGTAGAAACATGCTAACAAGTATGGAACAAACATTCTAATACTAAACCATTCTAGAGTATCAAAAATATAAATAAGTAGGCGTGTTACAATTTCCTATTTTTACAAACCCTAGAGTAGAAAAGGAAGTATGGTATATTCTTTTTAGTGTATGCAAATATTCAATCAGATCAGATGTACTAATATGTTTGTGCCATTGGGGGAGCCCTTATAAAGGTTGGTGTATATGTATGTACTGTTCAACACTGGTTTAAATAGGGCAATACTTTTAAGTATGAGGCTGATTGGCTGATGCATGCTTGTTGGCTTATTCTTTGAAGCTTACTCATTTTCAGCTTCTCAATGGGCTGCATATTAATCCTGTCCTTCACTTTGGCAATTGTTGTTTTGTTGTCAACTGATTTTAGGATTTGTATTTGAAGTTGTAGTGAATCATTATAATTTCATTTACTTGAACTGCTTTTAGATGTTTGGGGGTTTGAGTAAATTCTCTTGTTCTGAATGAAGTTGGAAACAGATGTCTTCTTGCACCCTAGAACATATTGCATGCATATGATTAGATGATAAGACAAAAGTTGGACAATGTAGTTTATGTAGCGTTTTTTGATTTATCTCAGAGAACTTGTTCTTATCTTTTCTTACTTCATCTTTCAAAATAAGCACGCACATCACAATGTATGCAAATTGAGCCTTAAGCATGTCTGTCCTTAAGGGTGGTTCCCAAATAGTACAACTTCTCAGATTGTTCTAGTTGTGCAGACTGAAACTGAAAATTGTTCCTACACAAGTTTTTTCCATTAGCCAATTTTAACAAAAAAAATCACAAGTTTTAATTTGACAAATATTCGACAAGTTCTTTAATACACTTGCCCTCAGGGGGATATCTGGTTTCCTTTTCCCAGTCAGTTCATGCTGGGGTTAACTCTGGTCATGAGTAGTGTTCTAAAAGTTTGCAGCTGTTTTTTTTGACCGGACGTTGTTTTTGAATTCAATGCCCACCTAGACCCTGCAGTTCTGTTACTCTTTCATTTCTTTCCTCTTAAACAAAAATCACCAAATGTTTAAGCAAATGGTTTTTGTGAATGTCACAGCATTATCTACCTACATTCTTACGTTATAAGTCAGTCTGTGCTAGCTGCCAATATTTGCATATTCATACAGTTTACTGCTTAAGCATGAAGCAAGTTTTTCTCACCATTTTTCTCCACTTGAGTGGTGGAATTCGTCTACTGTTTATATAATTTTATATACTATCTACTACCTGCTTGTTATCTTAGTCATAGTTGCATGATGAATTGGTTCTGGCTGAGTTTAGTCATTTAGGGAATGCCACCTGCACTTTTGGAAAACCCAAAGGAAAACGCTTTATTGAGCAATGGGACATAACTAAATAATAGCAACACTACTCCCAGAAAATAATAGCATATATATATCAAGTTTACTCACCACCCCAGAAGAACGATACTGTTATATTTCAATTATTTGTATCGAATGCTAGTGCAGTTTTTGTTTAATTATTTCATTCCACATTTTGATGCATAGGCAATTATCAAGATGGATAAAGGTGGATCTTTCCACATAACGAATATAGGAAAAGCTCCAATCTTCGTCAATAGCAAAGAAGTTCCATGCAACGAATGCACTCACTTAATTTCTGATGCATTACTTCAGGTATCTATCTTTACCCTCATTTTCTTGAACATTCCTGCCCTGTTAGATTCTACTCTCTCGATCCCATTTGTGTCATCAGTAAAATTAGTAGTTTAAGTCCCATTTTACTGTTCTTAACTAATCATTCTTCCCATTTTTTTACTGTAAAGCACAGTTTTCTCCTGATATTGTCCTACTTTGATGTTTCTTTTGCCTGCAGATAAGGCACATGAAATTCATTTTTCACATCAATCAGGATGCCGTGAGGCAACATATAGTTCGCAGTAGGAGAGGAACCTCCCAAGGCAAGTACGCAGTATTTAATTGGGATGAAAAGCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024679