Os12g0127600

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Revision as of 10:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0127600| Description = Similar to WRKY transcription factor 57| Version = NM_001072587.2 GI:297612587 GeneID:4351393| Length = 7794 bp| De...")
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Gene Name

Os12g0127600

Description

Similar to WRKY transcription factor 57

Version

NM_001072587.2 GI:297612587 GeneID:4351393

Length

7794 bp

Definition

Oryza sativa Japonica Group Os12g0127600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1319298..1327091

Sequence Coding Region

1319298..1319332,1319501..1319568,1319759..1320579,1322219..1322298,1322743..1323207
,1323291..1324903,1324991..1325077,1326094..1326220,1326580..1326726
,1326983..1327091

Expression

GEO Profiles:Os12g0127600

Genome Context

<gbrowseImage1> name=NC_008405:1319298..1327091 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1319298..1327091 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgaggaggtcaaggagaagtttcatctcgattctcccctctcctcgacccgagatttccgcccctctgctggttgcttccattggagtgcccctgccgcgcatcagattctcctagtgccacccgactgaaatcgcatgaattcactgccgaatttacaggttttggtcacaatttcgcaggtgtttccatggcagcaagattgggttcagtaacactggcaaaatgcgcaaatgagactgttacatatggagcttggaagctgaaaacaagatggatgagcttctacgggtacagagggagcttctacgatttcagtgactgctatccaagcatttccaccgatggggaaatactgacatctaacttgtttcaggcacagccaacgttttatctgagggtaaaattcaagaagatatatatggcttttggtgcaaatgacattgtgttgcatatcaagagactaatgctttgcccttctctattcaacttcttgctgtcttcatctccagtcttcctgttaactgcacttctgcttggagcacttttgagttatggtgaacctgctgttcttgttcttggagagaatcaacaaactttgtcctttaaatccaagatttccattactgactgttcgattgacaaggttgagactgttgctgtcgaggagcacttggataaaacaactaccagtaatgaagtatatgtcagggaaagaaattttgagggtaatatacatgacactcactgggaagagaaaaatggcacctacatgacagttgatactgctctaaatgaggaaatacatacgaaggatggaacttctgattatgatttgcaggatacccaccgtgaaggaaaaggtatcacatcagtggaaactgatactgttccttgtgtggcgccttcaagttttgcctacagtggtgtaactgtggaaactgaagacgttggggagaacagcaagaagaatgatgagctgcaagaacttggaagcatcaatcctgaaagtgataacaataaagtacaatatcaatatcagttaggtgagtttatgagttcatgttgggaacctgttatgagacaggagccacaggatgcttgttctgattctgaatctgatcttactgagagttctcctgatgcatcaatgactgacattattccaatgcttgaagagttgcacccattaatagacttgcaaactggccacccttcattggtctccagagacaacttgaatacttcttcggatgatgatgaagatgatcttgaggaggaggatgctagcacagatgaaaatcaattggaagggaaaatagatgattttgctaactggaaggatgttattgatctaaattacttggatatggacaataatagcaagctggagggtatgatggatctgcaaagagcaaagaacattctgaaatttgaacttgacaagaggttaatggacttgcaagcagctgatgcagtacagaaaatggaggaggcatcacgcttccgtgtgcaggttccctccatttccactggaaggcagaacccatttgattcttcaaatggctcagatgaaataatcgagttaccacatgttcctgattcagcaccgtcttgtctccttccacggaaaaatctatttgatcttgcagtcaaccaaaatatggcccatgatagtccattgcaagaaacttggactcctctttcgtacttttcagcaagacggcatagaaagcatggaaacttatatgttaggcactctactagcctgcatcacaatagcttcaaactggagaaagatgaaataagtgaaaatgatgcccataaatcccataatagtcagtcagacggtgatgccaagcaagaaaggaacaacagcacgttatttggttcactggaagcacatataggcgaagaaatcaaaatattaggcatggcaatttcagaggtgggtgtattagaagtaaattctggaatggttagcagtaaccaaaatgctgatttcagtgatgatatcagttcatctcctttccagaagcctagacaaagcactttcgaagctaaggatacagtacatgcaggtattgagcaattaacatcgtgttccccttacaaggtaaataattttgaggcacatattgttgaagcagactccattgatgaatttaactcattgtttaagtgtcgtatggaggaagtactagtgcaatccatctcaaagtccagtatcagtcaacccttgacagttaaacttgaagatgaattgagtgaaccattatctccagattctgggactgggacacatttcattgacgggagttcagttgaagattcggatccacgatttgcacagctcaatgatgaagcactggtatcttctacttctaacgcaacatgtcgtaatgagtcaattgaagagaaatcaagtgaagcattactggcaggaaacgaagattattcagaactgccaaatgaactgttaaaatcaggagatccacagactgcagatagttctgagattcaagtgcaggttattgatgctacagactggcattggcaacccctgatggtaaaccgctggactggagttgcagcttctgcagtttgctccttcaacagttatccagagcagcaatgtgatacagtggaacatcagttgcagttcctcggcctcactgtgaagaaacaatccctgcataagtctccgacgacgacgacgacgaggacaagaggaaagagcgtaatgagtcaccgtgacgcaactctgttcagctccgatgtcgcgagccttgctgccccaaacttcctattagatggcgtgattaactttgtgatggcgcacatgacaaccgagttgggtgatgagagccttctcctggtgtcgccatccgtggcttctctgctggcgaacttgcaagactatgagcctgagactgtcgctgatacagcccaggcactgttactggcatctcgcaggatggtgttattcccggtgaacaacagcgagaggttggacaaggccgacgatgggtcacactggagtcttcttgtgctggacaacatcaccggccgcttcgtccaccacgacagtatggacggcgccaatctgccggcggcaacccgcctcgccgacgcgctccggccactgctcccggcgccaccgcagggaccgcccatctcaggcccgacaccgcagcagagcaatgggtacgattgcggcgtctacctgttggcagttgccctggccatctgccggtggtggaagaagcatccaaggacagaagaagcggcgccctgctggtttgagtcggtgatggatcaagtaagtgctgagagcgtcgcagccatgagactcaacttggcccaaaagatcaacttggagctcattaagcaaggagacacaaccccctcctcgtcttggcctagcagcagcagcagcagcagacataaacataagatgattggatgtctgttgcctgttagtaaaccgctggactggagttgcagcttctgcggtaacatgcgaaaggttcacacgtctttgtattaa</cdnaseq>

Protein Sequence

<aaseq>MRGGQGEVSSRFSPLLDPRFPPLCWLLPLECPCRASDSPSATRL KSHEFTAEFTGFGHNFAGVSMAARLGSVTLAKCANETVTYGAWKLKTRWMSFYGYRGS FYDFSDCYPSISTDGEILTSNLFQAQPTFYLRVKFKKIYMAFGANDIVLHIKRLMLCP SLFNFLLSSSPVFLLTALLLGALLSYGEPAVLVLGENQQTLSFKSKISITDCSIDKVE TVAVEEHLDKTTTSNEVYVRERNFEGNIHDTHWEEKNGTYMTVDTALNEEIHTKDGTS DYDLQDTHREGKGITSVETDTVPCVAPSSFAYSGVTVETEDVGENSKKNDELQELGSI NPESDNNKVQYQYQLGEFMSSCWEPVMRQEPQDACSDSESDLTESSPDASMTDIIPML EELHPLIDLQTGHPSLVSRDNLNTSSDDDEDDLEEEDASTDENQLEGKIDDFANWKDV IDLNYLDMDNNSKLEGMMDLQRAKNILKFELDKRLMDLQAADAVQKMEEASRFRVQVP SISTGRQNPFDSSNGSDEIIELPHVPDSAPSCLLPRKNLFDLAVNQNMAHDSPLQETW TPLSYFSARRHRKHGNLYVRHSTSLHHNSFKLEKDEISENDAHKSHNSQSDGDAKQER NNSTLFGSLEAHIGEEIKILGMAISEVGVLEVNSGMVSSNQNADFSDDISSSPFQKPR QSTFEAKDTVHAGIEQLTSCSPYKVNNFEAHIVEADSIDEFNSLFKCRMEEVLVQSIS KSSISQPLTVKLEDELSEPLSPDSGTGTHFIDGSSVEDSDPRFAQLNDEALVSSTSNA TCRNESIEEKSSEALLAGNEDYSELPNELLKSGDPQTADSSEIQVQVIDATDWHWQPL MVNRWTGVAASAVCSFNSYPEQQCDTVEHQLQFLGLTVKKQSLHKSPTTTTTRTRGKS VMSHRDATLFSSDVASLAAPNFLLDGVINFVMAHMTTELGDESLLLVSPSVASLLANL QDYEPETVADTAQALLLASRRMVLFPVNNSERLDKADDGSHWSLLVLDNITGRFVHHD SMDGANLPAATRLADALRPLLPAPPQGPPISGPTPQQSNGYDCGVYLLAVALAICRWW KKHPRTEEAAPCWFESVMDQVSAESVAAMRLNLAQKINLELIKQGDTTPSSSWPSSSS SSRHKHKMIGCLLPVSKPLDWSCSFCGNMRKVHTSLY</aaseq>

Gene Sequence

<dnaseqindica>7760..7794#7524..7591#6513..7333#4794..4873#3885..4349#2189..3801#2015..2101#872..998#366..512#1..109#atgcgaggaggtcaaggagaagtttcatctcgattctcccctctcctcgacccgagatttccgcccctctgctggttgcttccattggagtgcccctgccgcgcatcaggtaaagactcttctttctcctcctcttcctccgcctctcggttccaatgtaccatagatttgacaataggcgttccgcacttgagttgctcgtgggatttattgaggaaattaggacactgaggagggcactagattcagttccggtaaagttccaaaattcggtggctccagtgactcagtgagtccctcgctccgccatgtgctgctgctttggttcagttttttttttttgacatgatgctttggctcgtcagattctcctagtgccacccgactgaaatcgcatgaattcactgccgaatttacaggttttggtcacaatttcgcaggtgtttccatggcagcaagattgggttcagtaacactggcaaaatgcgcaaatgagactgttacatatggaggtaaaatctgtttctttgacctgcataaggtgtgtcaatgtttggagtccacaaagtgaacccacatagtacagatgtacgacaaattgtttacttacaacttttgtggtccataaacgtgctttctttattgtacagctgatcactaaaatgagctgagttgtgttgtccctttttctttctttatcactattcacttgtgctttttttaagaaaattatagcagtcgcatgcattgatccatacaggctttctccccacagaaaaaagttgagcacattatgtgctatcattgtacttgtcccgtgcttatgagaacatgttcaaaggaagagctaagcttgcgcctgtaaattcagcttggaagctgaaaacaagatggatgagcttctacgggtacagagggagcttctacgatttcagtgactgctatccaagcatttccaccgatggggaaatactgacatctaacttgtttcaggcacagtaatagctttgacaggtctggtaaaatagccagattctagagggagtgaagactgtgtgcaacgaatgaggtgaaacttaaaagtgagagtgacagctaaagataccaagattgctctccactttccctacaaaacttctctctcatggcggtactccaaagcaaagaatcctagaaaaaaagggcgcaagcacagcactgcagcttcctatctcctttatttggtcttccattgcttcttgttgctgaggttgccttcctattgcccccttcccttttccactcttctaccaacacttgcttcaggctactgagggctttggcttctcggtgttgtcgctacaggtgagcttggcattctgtgcatttttgcgttctactgctaatctggtcttgtgctaagctccactattagcctcttgtgtggtcataggtggctcctaatttagcttcttgtgtgaatctgatcgtccaatctttttctaaatgatctgtaaattcgctttgattttggtctgattagattattttgtttatttctttgttactttcctctcttttatgggttgatagtatacaattatagcccaaaaatactgttgaattcagagatcttcattgtgataactgactgaacatttaaagagatggtgcttttccacctacctgttgaatgttaaaccattgcagatgatttttttttttgaacatgcaatttctatagatctctaactaaggaagctggaatgtcaccttatttgagcagtttgattgtattgcacattattaaacttgtgtttcaagtataaatctttttttttttcgccgggctggcgtaagatacgcggctgaagtttattaagattgggaagaggttcaaactagtacaacaattacagctgccatggaggctaagagctgtacggccgctattgttcaagtataaatctttacttgtttgaatattcaccataatgttatagtgatgaattgcttctctctttcctatttccaggccaacgttttatctgagggtaaaattcaagaagatatatatggcttttggtgcaaatgacattgtgttgcatatcaagagactaatgtattcatctgtcagaattggatatcaatttgcttgtgattaccctatagtactagctgctggcgttttgttgctgtttctacacaggctttgcccttctctattcaacttcttgctgtcttcatctccagtcttcctgttaactgcacttctgcttggagcacttttgagttatggtgaacctgctgttcttgttcttggagagaatcaacaaactttgtcctttaaatccaagatttccattactgactgttcgattgacaaggttgagactgttgctgtcgaggagcacttggataaaacaactaccagtaatgaagtatatgtcagggaaagaaattttgagggtaatatacatgacactcactgggaagagaaaaatggcacctacatgacagttgatactgctctaaatgaggaaatacatacgaaggatggaacttctgattatgatttgcaggatacccaccgtgaaggaaaaggtatcacatcagtggaaactgatactgttccttgtgtggcgccttcaagttttgcctacagtggtgtaactgtggaaactgaagacgttggggagaacagcaagaagaatgatgagctgcaagaacttggaagcatcaatcctgaaagtgataacaataaagtacaatatcaatatcagttaggtgagtttatgagttcatgttgggaacctgttatgagacaggagccacaggatgcttgttctgattctgaatctgatcttactgagagttctcctgatgcatcaatgactgacattattccaatgcttgaagagttgcacccattaatagacttgcaaactggccacccttcattggtctccagagacaacttgaatacttcttcggatgatgatgaagatgatcttgaggaggaggatgctagcacagatgaaaatcaattggaagggaaaatagatgattttgctaactggaaggatgttattgatctaaattacttggatatggacaataatagcaagctggagggtatgatggatctgcaaagagcaaagaacattctgaaatttgaacttgacaagaggttaatggacttgcaagcagctgatgcagtacagaaaatggaggaggcatcacgcttccgtgtgcaggttccctccatttccactggaaggcagaacccatttgattcttcaaatggctcagatgaaataatcgagttaccacatgttcctgattcagcaccgtcttgtctccttccacggaaaaatctatttgatcttgcagtcaaccaaaatatggcccatgatagtccattgcaagaaacttggactcctctttcgtacttttcagcaagacggcatagaaagcatggaaacttatatgttaggcactctactagcctgcatcacaatagcttcaaactggagaaagatgaaataagtgaaaatgatgcccataaatcccataatagtcagtcagacggtgatgccaagcaagaaaggaacaacagcacgttatttggttcactggaagcacatataggcgaagaaatcaaaatattaggcatggcaatttcagaggtgggtgtattagaagtaaattctggaatggttagcagtaaccaaaatgctgatttcagtgatgatatcagttcatctcctttccagaagcctagacaaagcactttcgaagctaaggatacagtacatgcaggtaaaactgttttttaaccctaagttatgtattgcaattttcctactggaaatgataactcaactgaagttgatgtcatgcaggtattgagcaattaacatcgtgttccccttacaaggtaaataattttgaggcacatattgttgaagcagactccattgatgaatttaactcattgtttaagtgtcgtatggaggaagtactagtgcaatccatctcaaagtccagtatcagtcaacccttgacagttaaacttgaagatgaattgagtgaaccattatctccagattctgggactgggacacatttcattgacgggagttcagttgaagattcggatccacgatttgcacagctcaatgatgaagcactggtatcttctacttctaacgcaacatgtcgtaatgagtcaattgaagagaaatcaagtgaagcattactggcaggaaacgaagattattcagaactgccaaatgaactgttaaaatcaggagatccacagactgcagatagttctgagattcaagtgcaggttattgatgctacaggtcactgaatgatgagacaagggcctaaaacaaggccaaacagccaatttctcagagagatctgtaaagcatagatagtccagtattagctctctgaacaggtttcttgcccccctttgttccaacttgctctatggcgtctggatttaacttttcctcttcttaatacaaaatgtgcagcaatcatgctgtttttcttcaaaaaacttttctcaggaagtccgtaatgtcagaaatatccaaggaacaatggatgtccatatggtttctgcttgtttcttctcttttgtttatgcttatttggtttcggttttgcgctaataggttagctatgagagtagatgatattgatatgaaacaccagttgcagttgcggtgtgatatccagttagtcaagacgatctttctgtcgctgcctatggcatagtttttcttgtctgccagactggcattggcaacccctgatggtaaaccgctggactggagttgcagcttctgcagtttgctccttcaacagttatccagtcagtaattaagtaatcaagtaatgcttccatagatttacctcctcatgcttatctgcttgttgtttgtggtttcgttaagaaaatcacagttccttagttaaaaaaaattcatagttcattacattacattacatgcatgatgtttatgttgggtataccgatctggatctgaggcgtgttttgttgggaaaattgaagatacgctactccccaggaacctttttcaggaaatcactcctttagcttgactttgctaaaatggattgtttgcatgatactaaaaaatacatgaatctttggtgtagaatcgcattgatgaataaatctatttttttttcatctgtttatagaaccatatcttacagatgagagcgtggcattcttcgactgttattctgttaaacaaataaaaaaattaaatatgtactgaacatagggtcaaacatttgacaactagccaacacacaggaatatcattattttcaaaatcacttcaaagttgaccaagacaccttcagcagtacacgggggccaccaagcttaagctctttcatgtcatatccatgtcttctagctttgaatggacaattttcagagacacgatacgagccatctccctgatcaaccttgaagaccaatggacagtattcagggatatcataatccgagccatccctatgaacagccttgaagattaaaaacaaaggtgtattctccaccacagcaactacaaacctattcaggtcacatggcttggaaatgacaccatcaaagagccgaatcttttcaggaatttgaccaatataggaatataaagataagctgaagccattgccatgcacttgtgatatgctaacttgtattgtggcctccactgcttcgtggaaaagggctcgactaatgtcgaccgcaccacaatcaccctcaatccgttgcgtaaacactctagatcacatttagatttgtactaggtcttaaatctcccatgtgtgcaattcgttgtgcgtgcaatcatgcaaatgtatcattgtctgttgcttcccccattcccaacttctttagtcatctcatatatccaatgtttgttcacattgactaatgttttctcggtttggagatttctgaggatttgagaggtcaacgcattgctttctcttagtgtttttgtttgctctttgtcattttgaaggtctgctcatgtttgacagagagggcacaagaataggtcactgtcactttcattggaagtttagagagatggaatggtgtaggagaaatggatgtttctcctaattcataatttcttactgtgcttatactccaaatttacagtccatagtatttgtaacttgtatttacttaactacaaattcatcatgcctaatgaattgtaagaggccaaaattttggatttatcttcttttgcgcaatgcgagtaatgtgaatacttgtcctttttgatcgcttgcagactgtttttgtttttgaagaaaggcagactgttattgttatgtgtatgtattgcagtccatctctgtctctttgattaatactgaggaaagttcactaatctccatgtcggttgattacttatcaaactaactaggttgttaatacatggttttgtactttgcaggagcagcaatgtgatacagtggaacatcagttgcagttcctcggcctcactgtgaagaaacaatccctgcataagtctccgacgacgacgacgacgaggacaagaggaaagagcgtaatgagtcaccgtgacgcaactctgttcagctccgatgtcgcgagccttgctgccccaaacttcctattagatggcgtgattaactttgtgatggcgcacatgacaaccgagttgggtgatgagagccttctcctggtgtcgccatccgtggcttctctgctggcgaacttgcaagactatgagcctgagactgtcgctgatacagcccaggcactgttactggcatctcgcaggatggtgttattcccggtgaacaacagcgagaggttggacaaggccgacgatgggtcacactggagtcttcttgtgctggacaacatcaccggccgcttcgtccaccacgacagtatggacggcgccaatctgccggcggcaacccgcctcgccgacgcgctccggccactgctcccggcgccaccgcagggaccgcccatctcaggcccgacaccgcagcagagcaatgggtacgattgcggcgtctacctgttggcagttgccctggccatctgccggtggtggaagaagcatccaaggacagaagaagcggcgccctgctggtttgagtcggtgatggatcaagtaagtgctgagagcgtcgcagccatgagactcaacttggcccaaaagatcaacttggagctcattaagcaaggagacacaaccccctcctcgtcttggcctagcagcagcagcagcagcagacagtaaactgattagatagcgctatctcattcattacacagttcctctctgacttagccttgcttaatctcttagatagctggttcagtaaactgagctgaacacttagtaactccagtctctgtccctgtcagtttttattgtctggcagattggcattggcaatccctcaccactttactactatttcagtaaacataagatgattggatgtctgttgcctgttagtaaaccgctggactggagttgcagcttctgcggtttgcttcttcaacggttgtcctggcaataattcagtaatcaagcgatgctttcataaattctttttttttcttttctacaccccctcatgctcattatctgcttgctgtaatgctgttggtggtctcatttttgtaatgttgttggtggactcatttttgttttaggtaacatgcgaaaggttcacacgtctttgtattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0127600, RefSeq:Os12g0127600