BGIOSGA024720

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Revision as of 06:17, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024720| Description = cDNA, clone: J100068H15, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA024720, complete gene.| ...")
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Gene Name

BGIOSGA024720

Description

cDNA, clone: J100068H15, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA024720, complete gene.

LocusTag

OJ1014_E09.2

Ensembl Transcript ID

BGIOSGA024720-TA

Ensembl Protein ID

BGIOSGA024720-PA

Length

4576

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4014982..4019557

Sequence Coding Region

4019477..4019557,4019145..4019333),complement(4017967..4018098,4017654..4017803),complement(4017194..4017349
,4016420..4016554),complement(4016244..4016309,4015913..4016019),complement(4015682..4015781
,4015513..4015604),complement(4015224..4015293,4014982..4015071

Genome Context

<gbrowseImage1> name=IndicaChromosome07:4014982..4019557 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:4014982..4019557 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGATCGAGGAGGTGCAGTCGACGACGAAGAAGCAGAGGATCGCGACGCACACCCACATAAAGGGCCTCGGCCTCGACGCGAATGGGGCGGCGATAGGGTTGGCGGCGGGGTTCGTGGGGCAGGGGGCGGCGAGGGAGGCTGCCGGGCTGGTGGTCGACATGATTCGCCAGAAGAAGATGGCCGGGCGCGCGCTGCTTCTCGCCGGCCCGCCCGCCACTGGCAAGACGGCTCTCGCTCTCGGCATCTCCCAGGAGCTCGGTAGTAAGGTCCCTTTCTGTCCTATGGTAGGATCAGAAGTGTATTCCTCAGAGGTCAAGAAAACTGAGGTGCTAATGGAGAATTTCCGTAGAGCTATAGGTTTGCGTATAAAAGAAAATAAAGAGGTCTACGAAGGAGAGGTTACTGAACTTTCCCCAGAAGAGGCTGAGAGTACAACAGGTGGATATGGAAAAAGCATTAGCCATGTAATCATAGGTCTGAAGACTGTAAAAGGGACTAAGCAACTGAAGCTAGATCCTACAATTTATGATGCTTTAATAAAGGAAAAGGTGTCAGTGGGTGATGTTATATACATTGAAGCTAATAGTGGTGCGGTCAAAAGAGTTGGTAGATGTGATGCTTTTGCTACAGAATACGATCTTGAAGCTGAGGAGTATGTTCCAATCCCCAAAGGGGAGGTCCATAAGAAGAAGGAAATAGTGCAGGATGTTACGCTTCATGACCTTGATGCTGCAAATGCTCAACCACAAGGAGGCCAAGATATTTTGTCCCTTATGGGACAGATGATGAAGCCACGGAAAACTGAAATCACTGAGAAGCTACGACAAGAAATCAATAAGGTGGTTAACAGATATATTGATGAAGGAATTGCTGAGCTTGTACCTGGTGTTCTGTTCATTGACGAGGTCCACATGTTAGACATTGAATGCTTCTCTTATCTTAATCGTGCTTTGGAGAGCCCATTATCACCAATTGTGATACTTGCTACGAACAGAGGAATATGTAACGTAAGAGGAACTGATATGACAAGTCCACATGGTATACCAGTTGATCTTCTAGACAGATTGGTGATTATTCGAACAGAAACATATGGTCCCACTGAGATGATCCAGATACTTGCTATTAGAGCGCAGGTGGAAGAGATTGACATTGATGAAGAAAGTCTCGCATTTTTAGGAGAGATTGGACAACAGACATCTTTGAGGCATGCTATTCAGTTGCTATCACCCGCCAGTGTAGTTGCAAAGGCTAATGGGAGAGAGAAGATCAGCAAGGCCGATCTTGAGGAAGTCAGTGCTCTGTATTTGGACGCTAAATCATCGGCTCGTCTCCTTCAGGAGCAGCAAGAAAGATACATTACTTAA</cdnaseq>

Protein Sequence

<aaseq>MRIEEVQSTTKKQRIATHTHIKGLGLDANGAAIGLAAGFVGQGAAREAAGLVVDMIRQKKMAGRALLLAGPPATGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEEAESTTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVSVGDVIYIEANSGAVKRVGRCDAFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKLRQEINKVVNRYIDEGIAELVPGVLFIDEVHMLDIECFSYLNRALESPLSPIVILATNRGICNVRGTDMTSPHGIPVDLLDRLVIIRTETYGPTEMIQILAIRAQVEEIDIDEESLAFLGEIGQQTSLRHAIQLLSPASVVAKANGREKISKADLEEVSALYLDAKSSARLLQEQQERYIT</aaseq>

Gene Sequence

<dnaseqindica>1..81#225..413#1460..1591#1755..1904#2209..2364#3004..3138#3249..3314#3539..3645#3777..3876#3954..4045#4265..4334#4487..4576#ATGAGGATCGAGGAGGTGCAGTCGACGACGAAGAAGCAGAGGATCGCGACGCACACCCACATAAAGGGCCTCGGCCTCGACGTGCGTCCCCGTGCTTCTCCTGCTCCTCCGCTCTCTCCCCCACCTTGCTGCTGCTGCTGCTGCTGCAGTGGGGAAAGGTTTTTCTCCTAGGGTTTTAGAGAAATTTTTCTCATGGCTTGGCTTGGTTTGGTGGTCTCGAGCAGGCGAATGGGGCGGCGATAGGGTTGGCGGCGGGGTTCGTGGGGCAGGGGGCGGCGAGGGAGGCTGCCGGGCTGGTGGTCGACATGATTCGCCAGAAGAAGATGGCCGGGCGCGCGCTGCTTCTCGCCGGCCCGCCCGCCACTGGCAAGACGGCTCTCGCTCTCGGCATCTCCCAGGAGCTCGGTAGTAAGGTTGGTTGGTGCCTCCACTCCCTCATTCTCCTCTCGAACACCCTTTGAGCACTGCTCTAGATGATTTGTACACTCTGCTGTAAATTAAATTTGGAGGTTAGATTTTAGGCTTCATAATGAACAAGCCATGTTATTAGCAACATATGCTCACCGTAAGCTTGTACAAAGTGTTTTGCCTTTTGGGGATTTTTGCTCTTCCGCTCGTCAAGAGGTCGATGCGATGGCCCTCAGCGTGGTGAAATGGTGGCCGCACAAGGTTGTGAATACCTTGGTTTTAAGCCTCATTTCAACAACATATTATACATGTGTGTGTTCAAGCCTCACTTCTACATAGAGGGGTTATGTTTCCTGCCTTTCATACCATAGACTTAGTTTAAGAGGTCTTACTTCTATTTCATAGTTCTCTTTACTGAAGATTGAATGGAGTTAAAGCATGTGGCCACTAAAAACTGATGAATCGTGTTTAAGTGCAATAAGGGCACCGTGGACAATTGTTCATAATAAGCCATTTCTTTGTAAGTTTGAATCCTTTTTGTTCATTAGCTAGTGTAAACAAGTAATTCTACATTTATAAGGGCTCATCTAGCTCCAGAAAGGCATTCATATTGAGCTTCTGGTATTTGAGAACCTATGCCTTATTATTTTTTAGTTCAACTGTTGGGAGGATGGTTGGATTAAATTTCAGATTCACCTAACTAAATTGCTATTCTAAAGAAATGGTCGACTTAGCATGTTTTTTTCTATGTTTTTGGCTTTCAACATTTCTTTTAGGCTTGGATTCTGTTGCTTGCTGGTTCAATATATTTGTTTCCCTTCCTTGAAAATAATTCTGCTAATGGTGGATCACTGGAATTTGATGTCAATTTATTAGATACCTGTACATTTTTTTACTTTATACCTCACAATCTATATGAGAAATTCTTTGTGTTAACTATAAGATTTTTCGTTCAATGTCTTACATCTCTTCATTTTTGGTAAAACTTCCAATGTTTCATTCATGTTGATGGAGAATATCTTATGTGTTATCTTATTATTTTACTATACAGGTCCCTTTCTGTCCTATGGTAGGATCAGAAGTGTATTCCTCAGAGGTCAAGAAAACTGAGGTGCTAATGGAGAATTTCCGTAGAGCTATAGGTTTGCGTATAAAAGAAAATAAAGAGGTCTACGAAGGAGAGGTAAGCACACCATATATGCTAATTTTTAAGTTTGCACTAAGATATTGTTCTTGAATTTGTGCATTATTTCATTTTCTCTTGATATTAGCACATTTATAACTGATATGATATTCTCACTGTCTGTTTCTAAAATAATATATATTTGTGCTTCATTGCCTTTTAGGTTACTGAACTTTCCCCAGAAGAGGCTGAGAGTACAACAGGTGGATATGGAAAAAGCATTAGCCATGTAATCATAGGTCTGAAGACTGTAAAAGGGACTAAGCAACTGAAGCTAGATCCTACAATTTATGATGCTTTAATAAAGGAAAAGGTATCCTGCTCCTCGCCCTCCTATCTTGTGCTGGATATTTTAGAATACACTAAGTGCATTTTTTGAAATTTTAGTAATAGTTGGATGATTGTTCATTTCTTATTCAGAAGAATGCCTTGTTGTGAATATTTAATCTATAAAGTAAACTTTGGAGAATGTTAATTGTAAAAAAAAAATTGCATGATTGGAAATTCATAACTTGTCATCGTGAAGCTGATTAGATGCCTTGATACTGAGATTCACTTCTGTTACTTCCATTTTTTGCACTAGTTGTTTCATTACATCAGTGATACATGGGATGCAGGTGTCAGTGGGTGATGTTATATACATTGAAGCTAATAGTGGTGCGGTCAAAAGAGTTGGTAGATGTGATGCTTTTGCTACAGAATACGATCTTGAAGCTGAGGAGTATGTTCCAATCCCCAAAGGGGAGGTCCATAAGAAGAAGGAAATAGTGCAGGTAATTTGGTGAATTTTAGCCTAAAAGATTTTTGCACAGGCAAGTCTTTTTTGCATTGTACTATCTATGAATTTATGTTGGTGATAATTAAAGAAATGAATGGATCGTGTTTTACAAATTTGAAGTATAGTGTCAAATATTCATGCCTTGAAGATTGAAAGTAGAGCTGTCAGCTATGGGACATTTTGTTACCATCACACCTTGTCTGAATAGATATGGATTACCAGATTAGAACCAACTCTTTCAGGCCTGTAGGTGATATTGAACTAACCGCCCTACCAAAGCCAAAAGGATTGGTCTTAATCCCTTTTCTATCCACATTTGTAAATACACCTCCCTTGATAAATGGTTTATACAGTTCACAAATCAAACACTACTAAATAATAAATTCATGACCATCGGTCTACATTATTATAACCCTTGGAGTTCATTATGTTTGATTAATTAGGTCCCACTGGAAGATTTGTCCTTTTTATCTTCTATTTTATCCCTCAACTGTTATATTCCTGTCTACCGGCATAAGAAAATGGGTTCCCTTATACAGCATTAGTGTGTTATATACAGGCTCTCTGTTTATGATTCTCAAGTTATATGGATGTTAGTTAAAGAGCTGAAACTTCAGTTATCAATTTTGTACAGGATGTTACGCTTCATGACCTTGATGCTGCAAATGCTCAACCACAAGGAGGCCAAGATATTTTGTCCCTTATGGGACAGATGATGAAGCCACGGAAAACTGAAATCACTGAGAAGCTACGACAAGAAATCAATAAGGTATTCAAATTTCCCATGTAGCAGCACTGCTGCTTTTAAAAGTGGACCACATTTAATAAACATGTCAGGATTGGCATATGATCTTTAACATCTATACTGTATGTTGCTAGGTGGTTAACAGATATATTGATGAAGGAATTGCTGAGCTTGTACCTGGTGTTCTGTTCATTGACGAGGTATCTTATTATTTCATCCTTACGAATTATGATTGGAAATTTTCTCAGTGGCTCATTTTGGAGTCAGAAGTTATAAATACAAATGAGGGTGTGTTTGTCTGTTGTCAAACATACAGTGGGTTGTCCTTGTGGGGCAGTGCCATACTGCCATGCTATTTCTCTACTATATGGTATAAATCTTGATGTGGTTTGATTTAGTTACTTGTGAGGAACTTTAATCGCAGGTCCACATGTTAGACATTGAATGCTTCTCTTATCTTAATCGTGCTTTGGAGAGCCCATTATCACCAATTGTGATACTTGCTACGAACAGAGGAATATGTAACGTAAGGTAAACAGTTTGATTTACCAGTCGAAGCACTCTGCGCTACATTATAATACCAGACTAATCATGTGTTTGTCAGTTTGTTTATTACCATATGCTCCTTAAAGTTTACAAAGTCTTGTTATGCTTGTGTCCAGAGGAACTGATATGACAAGTCCACATGGTATACCAGTTGATCTTCTAGACAGATTGGTGATTATTCGAACAGAAACATATGGTCCCACTGAGATGATCCAGGTTTGATTTTGGATCTTATATCACTTAGGCTTTCCTGTTTAGAAATGTGTTTGATCTTTGCTCATTGTCCTCTACAGATACTTGCTATTAGAGCGCAGGTGGAAGAGATTGACATTGATGAAGAAAGTCTCGCATTTTTAGGAGAGATTGGACAACAGACATCTTTGAGGTACGATTCTTGGTTGTTACACCGACAGGTTTGAGAAAGAGAGTTAAGATGGAAATTATGCAGTAGGGAGTTATGTTAAGTGGACTGATCTTATTTCCCACTTACGGTGTTCTATAAGCATTTTAAATTTTGTAGTTTTAGTTTTATAACCACCAAGCTCATCTTACTGAGGCAGCTAGCGAAGATGAACGATTGTAACACATGTTGAATCTCATGTAGGCATGCTATTCAGTTGCTATCACCCGCCAGTGTAGTTGCAAAGGCTAATGGGAGAGAGAAGATCAGCAAGGTATGTGTTGAAATTCCAGCAGGATATTGTAACGTCCTCTTGTTGTCTTTTTTGCCGTATGGGCTATGGCTGGCTGCTACATTCACTTGTTAGCCTGATATTGTTCTTGCAAGTTTTATGTATGCTGAACCCATGACCTTGTTTTTAATCAGGCCGATCTTGAGGAAGTCAGTGCTCTGTATTTGGACGCTAAATCATCGGCTCGTCTCCTTCAGGAGCAGCAAGAAAGATACATTACTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024720