Os12g0129700

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Revision as of 10:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0129700| Description = Cyclin-like F-box domain containing protein| Version = NM_001072599.1 GI:115487159 GeneID:4351406| Length = 8059 bp|...")
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Gene Name

Os12g0129700

Description

Cyclin-like F-box domain containing protein

Version

NM_001072599.1 GI:115487159 GeneID:4351406

Length

8059 bp

Definition

Oryza sativa Japonica Group Os12g0129700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1436031..1444089

Sequence Coding Region

1437281..1437499,1441412..1441726,1442441..1442559,1443198..1443666

Expression

GEO Profiles:Os12g0129700

Genome Context

<gbrowseImage1> name=NC_008405:1436031..1444089 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1436031..1444089 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgacctggcctgtccatagcattcttcatgctgatgttgtcttcttgtacttgtccggccctaatactgggaataatactggggagacagagcggtacatggtcagcatcaacgtgcagcacagggaggctatttcaatctccaagttatctcctgatgatagttcccctcctccacgctactttcccagcagcttcaattcgtacataaacaagcgatccggaagggagaaaggcggcgacaatgtcaccgttaggacgaacaagaaagcggagtacatctcagggctctcagaggattgccttgctcttgcaatctccttgacgactcccatggacgcgtgccgctgctgtgccgtctccagggccttccaaaaagcggctaattccgactctgtgtggaggcacttcttgccgaaggactacctctccatcctggctcgtgccgacgatcgtgtgcatttcacttccgagaagaagctcctcgtcagccttgtcaaagaccacgtcctcctcgaccaacacagcaagagtctttggttggaaagaacaagcctagccaagtgctacttgctatcatcgagatcattaccgatagcatgggaagaccatcccctgaaatggagatggatctccttacccgattccaggtttgaagaagtaactgagcttctaaaggtctgctggctcgatttatgtggcagagtcaactgcagagagctctcacccaacacagaatatgcagcctacctcgtcttcaaattgacagatgattcgtacggccttgattgccagacacaagaggcagacatcaccatggacgatcaagtagtgtctgccaagcggaccatctctttctacccacgcccacgcccacgcccacgcccatccacacgagagacactttctaacatgggtagaatcgaagaagcaggacaagcagaggagccaagctacccaagagaacgaggtgatggctggctggaggtacaactagggcacttctacaacgacctagaagacactggagtggttgttatccgcctcaaggagcatatccagctcaactggaagaaaggacttatcttggagggtatggaaattagacacaacatataa</cdnaseq>

Protein Sequence

<aaseq>MPTWPVHSILHADVVFLYLSGPNTGNNTGETERYMVSINVQHRE AISISKLSPDDSSPPPRYFPSSFNSYINKRSGREKGGDNVTVRTNKKAEYISGLSEDC LALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARADDRVHFTSEK KLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPDSR FEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGLDCQTQEADITMDD QVVSAKRTISFYPRPRPRPRPSTRETLSNMGRIEEAGQAEEPSYPRERGDGWLEVQLG HFYNDLEDTGVVVIRLKEHIQLNWKKGLILEGMEIRHNI</aaseq>

Gene Sequence

<dnaseqindica>1251..1469#5382..5696#6411..6529#7168..7636#aattgattccccgcacaccccgaccacaagtccacgcctcaacgaagaaaatctcagatccctgttctcccctccccctcgattagccgaagaaaatcctcgcacaaggaagtctcatggattcagatccagccatggtgctgcttaatcgctccgtgctcttggtcaacgaggtaacagatgtaatgaaggaaaaaggctggtctcttgagctcgacgagaaggcaatttcagacgcatgcgacggtatcacggattggcaggagaaagagaaggcaaggcaaaaggccatacgagcagagatcaagaggtttcgagccaaccaagatgcggcggaggccattttgcgcaagcgcaaggcctccatgccccccagcacggtgaccaagttttgtactgacaccgacctccgtaaggttttggatggcatcgaactagatcctcaagtccatgatataccaggtttgtccttctttcgcctccggctgtcgtctgcacgacatcctcctgatttgcagggcacctccgtcgccggtgcggaccacaacatcctcgtcttctatgtcggcccctaccggcccggtttccctgcaccgggattttatctggtttacgacgcatgggccaactcactgtccgccatccaccagttgccatatttaggcggcggcagtattggctctgaggttgccgtgctgcgccatgctccggccagcgactatatcctcgccgagctcctcctcactggcgaactccccaaggcaagtctctggacgtggtgttcgtctggtccgtccgctcgccaatggatccacaagacagtcatcctccctcctgaagtgtgcacgcccacctacatctttcatgccgataccactttctctcttgggaagtttgcgctctgttgggtagacctcctcgttggcatcttgatgacctgcgatacccttgccccagaacctgttttccagttcatcccgttgccggaggggtgctatatggagccgcccgaccctcaagatggacgccaggtaccacaggaataccggtctatgtgttgcggcaatgacggtatcatcagattcatctccatcgacggctatcatcaagacctctctatcaacgatatgaggaatatgttcctcaggacatggtctcttactcttaaccccaaggagtggaagcaagaagcggcactatgcattggagacctctgatctgacacaacccaccagaagctgccagcactaatgccgacctggcctgtccatagcattcttcatgctgatgttgtcttcttgtacttgtccggccctaatactgggaataatactggggagacagagcggtacatggtcagcatcaacgtgcagcacagggaggctatttcaatctccaagttatctcctgatgatagttcccctcctccacgctactttcccagcagcttcaattcgtacataaacaaggtaactagctcattttgcaagcaagcagcaggaaatataggtagaaatagttcaaaaagtaagcataaaaatgtagaggctaacagagggtgttacgtacaaggaaatcccatataccaagtactttattttattagggcatgaggtcattcactactacacgagcacatcagcgcccccatcataaatgccggtttgacaaaatgttaaactggcactgatgatgattttcccgccctaaccctcgaccaaattatcacaaaaaagtacatggaattaggagtgtgtggttcatggattgcaatttcggaatacttcgaccaaattatcacaaaaaagtacagatttacagtgtatcacaaaactacagatttagtaccaaatctatctatttatctattatattattaaaacaactttgaaagaaggcaccacgttcgctgtggaggctagaaattcccacattaatcggaggaaacgaaaaatatctacatcgttagatcacagtaagactatattataacggcggagatcgatcatatataaatagatattagagttgtgaagataatacatctggtccaaacataaatatttgtttcagatatgcaacgggatcaaatttctatttgaaagggattaggagtgttgtgtaaaggtctcgggcagcttgatgtatcggaataaaaaaaggaaaaagagagcgccatctagcgtttcatacaggacaataatttagaaaaaaatagccttatacaactgcacacattggtgcatgcacttcggcagcgatgcgcacatacgagatggcaggttattgcaaagttaacagtccaaaagtacgagttatctgacaaatcaatttcttaggactacatatttctagcatattatattatagagatagctcaaaagtcaactattaccttcacgatcaatcaaggattagaaaatcttatagtaattataaaaaatgattttaaccgttagatcatagcgagtttaaattataacagatcgatgggagttatatagaaaatataaattgtatcagtagagaaaaacaaaagttaaatataataagatatttcacatagaacaaaaccgagtatgactaggacatggacatgacagtaggtagcgaaatcctatatggacacggatcgaattggtgagcatgcagaacatgttttgcagtcctttacagtttcagggtagcatgtagctttaaaacagaaaagcgtagaatcctacatggattaaaatttatagcagcgaagccccttagacggctaagcgagcgaaaaaattacatcaacgcagcctcacacaaccaaacccatgcacaaatcaatatgacacaacttactcgagcattaaggctattaagcagctgtgaaaccttggcttgatgtgtaggtctgggatgccgttgatctgagattaaatacgggagcgattaggctaagcacgtacttgcacatgcattgctctctgtgtttaatcatggtaacaagcaggaaaagaaaaggctaccataaaagaggaagaaatgaatgtccatatacatctatggttcactcttttatttttttttaaaaaaaaagaatctcaacataagcataatttgtcccctgcttctggaagggttgtcccttcgtactaattaatctttgtgaacgcaaatacaactatagatcaactaaggtctacacgatgaagtaatatgcgtagatgtgtgtactatatttacatttaaatgcgacacactactcatcagtgttcatggtattattatacgcagatttaaatttttaataaaaataaaatcaattttaaaattaaaaaaagaaaattaaaaattcaagtagaaatacaattagaaataattgaaaatagaaataaaaacaagaaatattgaaagaaaactacaatctatgaaagataaaatgaattttattgtattattaagaggacaattcgagggtcagcaaaggagatgggcaatggcggctagcaagacttttacaaactttttaaaaaataacaaatgatcaggttaaaattttaaaatcctaataataacaaagaagatgggcaacgggctagccgtagaagtggcggttgacgggatatctaacaactataaaacaactccaacgataactaggtttgatttttaaaatccaaaaataataaagaagataggtggcaggtatgacataaaggagtagggtagtagttgttgacaggattgtagaaactaaaaaaaaaaaagagataatccattatatgccactgactttatcatgttctacaatatgccatcgacttttgcttaacttctacgatttaccatcgccgcccggttagtctccgttagtactgtacaaatttgtcaaaatgaccaaaatatccctgggacaaaaactttcaaaatttggataaaaattctgaaatgtcagattttaagtttttggccaaattttggatgtttacaagcttatgttcataatatgatattttgataattttatccaaattttggaaatctttgttctaggggtattttggtcatttggacaaaaatgtaccgtgctaacggaggctaactggacggcgatggtaaatcgtagaagttaagcaaatgtcgatggcatattgtagaatgtgacaaagtcagtggtaaatcgtagacgtgtgacaaagtcagtggtatataatggattctctcaaaaaaaaattctcaacgatgatcgagcttgatgcttacaatcccaattagaaaccttataataataaggtttatttttttaaaattactaagataataagataactatttaataaattttaaaaaaaaccacgtgtaaagaattttagataattttaaacagtgctaaccgtgcaattacgcgggccaccctgctagtttatcaccaaactacagatttaaggctaagtatcataaaaatgcacatttaaattgaagttatcacaaaactacagattttgaagtttaaatccctaacaccattgttatgttggagctataaacattattgctttgtgaccaaattggttctaaacctgtagttttgtgataatttagttactaaacatgtagttttgtgacacttcatcttaaatgtgtagttttgtgatcaatttggtgttaaatgtgtagttttgtgatacatcgagttaaatctgtagttttctaataatttggtcatagtatatgtacttttgtgaaatatactcttttttttataaaactgatatttaacttgtagttttctaatacgttaatttttaaatttgtagccttgtgtaaaatatgatattaaatctgtaattttgtgatagattgataaaatatctgtagttttataaaatttacttatgtatttttcaactttctgatattagtaaaagtaatgcaaaggatatactaatctacaatgcacacagtccaataggaaaacaaatacatgacaacatttgtaacatgaaaaaaaattaaccggcagacattagagcacataatataatgggagaactaattaatcaagtactattcaatttaagttcctccatttgaaaaaaatataaaagcacaaatacaaatcacactaaatgaagagagataaatataagattgcatggatatgttaaaggattatgaaaataatgtgaagatgatttgatatgtttcatgtttgatctctagaatataataaattatagatttgaatgtacgtgttaagatgtaataattgtcaatggaaaatgatgtgtcatgtttacatgttaaattttaagatatactccgtagtgtattgtaaccatacagaagaagatatagatgagacataacagttctcgtgatatttgtctccaaccatgaagcgatccggaagggagaaaggcggcgacaatgtcaccgttaggacgaacaagaaagcggagtacatctcagggctctcagaggattgccttgctcttgcaatctccttgacgactcccatggacgcgtgccgctgctgtgccgtctccagggccttccaaaaagcggctaattccgactctgtgtggaggcacttcttgccgaaggactacctctccatcctggctcgtgccgacgatcgtgtgcatttcacttccgagaagaagctcctcgtcagccttgtcaaagaccacgtcctcctcgaccaacacagcaaggtacgtaatagggaaaatatttctatcccttaaaaggacattctttgttttttccgttttacctaaatagctatcaaattttctttaaaaaaattatatgataggtcaatataaaatatgtcattacacggacatgtaatttcaaatttaatatatataagtacaaacaaaaataacaaatttgattgtgaataatgtgtattattcgtagtggaatttattatttccctttctatctataaatgttaaatttgaattgcatgttttttttataacttttatggtgatatgcacaaaagaggatatcccttaagttctagttcgattaattcctcccgcaaaaggattaaggagaatttggagaataattccacgcctattgaggtatgggattaatcctctgtaatccctctctcttgagattaaccgaacaaagtctaaaggatgaaaacccgcttcccacgtactcccttcgtcccgaaaaaaacaaatctaggcctgaatatgacatattatagtacaatgaatctggacagaggtatgtcaagattcgtagtattacgatgtgtcacatctagtactagattggttttctatgagacggagggagcaataacataaagctttagtatgaatttcttcaatatagtattaccaacttttgttatcgtaatgttaactgaatgaaggcgattcattatacattgcacgcagagtctttggttggaaagaacaagcctagccaagtgctacttgctatcatcgagatcattaccgatagcatgggaagaccatcccctgaaatggagatggatctccttacccgattccaggtacgcgttccaacctactgtagcaatgtacaagataaatttaacgttagctcatttgtttgtttcccttttgcaaagataggtatatatatatatatataggtaacatatctcatgcacacaaaccttcacgtgtacatatcatgcacaccaactaacaaatattactaaaaattctataaaaaaattgtacatattgaaatactttcaatagtattatacatacatgtaaagcatcatcttcaaattcattttacatatagagaaaaaaagacaataatgatataaactcgtagttttaaaactgtcagagtttttgttttctaggctaaagtatatggacatttttttctagatttttagtgacgtttgttagttggtatgcacggagtgtgcacatgaaacttgtgtgcatgtgcatgggatatattccctcatatgcaatgcacatcttttagaaatgtttgtcaaagaagtacgtagtctggacgaatatacaaaagcattaagaaataaactacaaagaaattatccatcagataatctttaaattcaatataataataactagtattcggtttgatttgattttctttttatcaatttaagcagaaaccaaagttttctccctgtttcaggtttgaagaagtaactgagcttctaaaggtctgctggctcgatttatgtggcagagtcaactgcagagagctctcacccaacacagaatatgcagcctacctcgtcttcaaattgacagatgattcgtacggccttgattgccagacacaagaggcagacatcaccatggacgatcaagtagtgtctgccaagcggaccatctctttctacccacgcccacgcccacgcccacgcccatccacacgagagacactttctaacatgggtagaatcgaagaagcaggacaagcagaggagccaagctacccaagagaacgaggtgatggctggctggaggtacaactagggcacttctacaacgacctagaagacactggagtggttgttatccgcctcaaggagcatatccagctcaactggaagaaaggacttatcttggagggtatggaaattagacacaacatataagtctttgaggaagatacagaaaaatggagcaagtatgttagaagacaaaattaaataatgcagcattgaatatgcacaaagagcagtcatgattcaaccagtgttcaaaaatcctggctgtaagcaattggttaccgctccaaagccgatgaaccaacattggcatactgaacagaacaatttaaattcaactttggaagtatgccaacttcttatctttcatggttatttgttgttatatttctaaaggaaaatgaaatattcgcattcagttctataattatatcaattgccacacttgtggtggaactattgatatgttgtatgtatacttctgtgatgcatgtctttatggactattgcatcataatcattatgttctatttgtgatgaattcaataatgctatatatgttggatcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0129700, RefSeq:Os12g0129700