BGIOSGA024808

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Revision as of 06:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024808| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024808, complete gene.| tag = OS07G01...")
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Gene Name

BGIOSGA024808

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024808, complete gene.

LocusTag

OS07G0152200

Ensembl Transcript ID

BGIOSGA024808-TA

Ensembl Protein ID

BGIOSGA024808-PA

Length

3497

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2733929..2737425

Sequence Coding Region

2734485..2737425,2733929..2734317

Genome Context

<gbrowseImage1> name=IndicaChromosome07:2733929..2737425 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:2733929..2737425 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCATCCGTGGCGAGGGTGTTGCTCGCGGCGGCGGTCTTCTTTGCCGCTGTCGCTGCCGCCGCCGCGGCGTCGTCGTCGGCGGCGGCGGTGGCGGCGTTGATGGAGTTCAAGACCAAGCTGGACGACGTGGACGGGCGCCTCTCGAGCTGGGACGCGGCGGGCGGCAGCGGCGGCGGCGACCCGTGCGGGTGGCCCGGCATTGCCTGCTCCGCCGCGATGGAGGTCACCGCGGTGACGCTCCACGGCCTCAACCTCCACGGCGAGCTCTCCGCCGCCGTGTGCGCGCTCCCGCGCCTCGCCGTCCTCAACGTGTCCAAGAACGCGCTCGCCGGCGCGCTCCCGCCCGGCCTCGCCGCGTGCCGCGCCCTCGAGGTGCTCGACCTCAGCACCAACTCCCTCCACGGCGGCATCCCGCCGTCGCTCTGCTCCCTCCCGTCCCTCCGCCAGCTGTTCCTCAGCGAGAACTTCCTGTCCGGCGAGATCCCGGCGGCCATCGGCAACCTCACCGCCCTCGAGGAGCTCGAAATCTACAGCAACAACCTCACCGGCGGGATCCCGACCACCATCGCGGCGCTCCAGCGCCTCCGCATCATCCGCGCAGGGCTCAACGACCTCTCCGGCCCGATCCCCGTCGAGATCAGCGCGTGCGCCAGCCTCGCCGTGCTCGGCCTCGCCCAGAACAACCTCGCCGGCGAGCTCCCCGGCGAGCTCTCCCGCCTCAAGAACCTCACCACATTGATCCTCTGGCAGAACGCCCTCTCCGGCGAGATCCCGCCGGAGCTCGGCGACATCCCCAGCCTCGAGATGCTCGCCCTCAACGACAACGCCTTCACCGGCGGCGTCCCCAGGGAGCTCGGCGCGCTGCCATCCCTCGCCAAGCTCTACATTTACCGGAACCAGCTCGACGGCACCATCCCAAGGGAGCTCGGCGACCTCCAGAGCGCCGTCGAGATCGACCTCTCGGAGAACAAGCTCACCGGCGTCATCCCCGGCGAGCTCGGCCGGATTCCGACGCTCCGGCTGCTCTACCTCTTCGAGAACAGGTTGCAAGGAAGCATCCCACCGGAGCTCGGCGAGCTCAACGTCATCAGGAGGATTGATCTGTCCATCAACAACCTCACCGGCACAATTCCAATGGAGTTTCAGAACCTCACCGATTTGGAGTACCTGCAGCTGTTCGACAACCAAATCCATGGTGTCATCCCTCCTATGCTTGGTGCAGGCAGCAACCTTTCGGTGCTCGATTTGTCGGATAATCGGCTGACGGGGAGCATCCCACCTCACCTTTGCAAGTTCCAGAAGCTCATCTTCTTGAGCCTCGGATCGAACCGCCTCATCGGCAACATCCCCCCGGGCGTGAAGGCTTGTAGGACATTGACACAGCTCCAATTGGGGGGGAACATGCTCACCGGGAGCCTCCCCGTCGAGCTTTCGCTGCTGCGGAACCTGTCGTCGCTTGACATGAACCGGAACCGGTTCTCGGGACCGATACCACCCGAGATCGGCAAGTTCAGGAGCATAGAGAGGCTGATTTTGTCGGAGAATTACTTTGTTGGGCAGATCCCTCCTGGCATTGGCAACCTCACCAAGCTTGTCGCCTTCAATATATCGTCGAACCAGCTCACCGGACCGATTCCTCGGGAGCTGGCGCGGTGTACAAAGCTCCAGAGGCTTGATCTGAGTAAGAACTCCCTCACTGGAGTCATTCCTCAGGAGCTTGGCACACTGGTGAACCTGGAGCAACTGAAGCTATCTGACAATAGTCTGAATGGAACCATACCAAGCAGTTTCGGAGGCCTTTCCCGGCTCACCGAGCTGCAGATGGGAGGCAACCGCTTGTCCGGCCAATTGCCGGTCGAGCTTGGCCAGCTCACTGCGCTCCAGATTGCGCTGAATGTCAGTTACAACATGCTATCTGGTGAGATCCCGACTCAACTAGGAAACTTGCACATGCTGGAGTTCCTTTACTTGAACAACAATGAGCTAGAAGGTGAAGTCCCTTCCTCATTCGGAGAGCTCTCGAGTCTGCTGGAGTGCAACCTTTCTTACAACAATCTTGCCGGGCCGCTTCCCAGCACCACGCTGTTCCAGCACATGGACAGCAGCAATTTCCTGGGAAACAATGGCCTTTGTGGTATCAAAGGGAAATCATGTTCAGGATTATCAGGGTCAGCCTATGCAAGCAGGGAAGCAGCGGTGCAGAAGAAGCGGCTTCTCAGGGAGAAGATCATCAGCATTTCCTCCATTGTTATCGCGTTTGTCTCATTGGTGTTGATCGCAGTCGTTTGCTGGTCCTTGAAATCCAAGATACCTGATCTTGTATCGAACGAAGAGCGCAAGACTGGGTTTTCAGGTCCTCACTACTTCCTGAAGGAACGGATAACCTTTCAGGAGCTTATGAAGGTGACCGACAGCTTCTCAGAGAGTGCCGTAATTGGAAGGGGTGCTTGTGGCACTGTCTATAAGGCTATCATGCCTGATGGGAGAAGGGTTGCAGTGAAGAAGCTGAAGTGCCAGGGAGAAGGTTCCAATGTCGATAGAAGCTTTCGAGCTGAGATAACCACACTCGGAAATGTCAGGCACCGGAACATTGTCAAGCTGTATGGTTTCTGCTCCAATCAGGACTGCAATCTTATCCTGTATGAGTACATGGCAAATGGTAGCCTTGGAGAGTTGCTTCATGGTAGCAAGGATGTGTGTCTACTGGACTGGGACACCCGTTATCGGATCGCTCTCGGGGCTGCGGAAGGTCTGAGGTATCTTCACAGTGACTGCAAACCGAAGGTGATTCACCGTGACATAAAATCGAACAACATATTGCTTGATGAAATGATGGAGGCTCATGTAGGGGACTTTGGCTTGGCAAAACTGATTGATATTTCCAACTCCAGAACAATGTCTGCTATTGCCGGTTCATATGGCTACATTGCACCAGAGTATGCTTTTACCATGAAGGTGACTGAAAAATGTGACATTTATAGCTTCGGGGTAGTCTTGTTGGAGCTAGTGACGGGACAATCTCCGATTCAACCTCTTGAGCAAGGAGGGGATCTTGTCAATCTAGTGAGGCGGATGACAAACAGTTCGACAACAAATTCTGAAATTTTTGACAGCAGGCTGAATCTGAACTCAAGGAGGGTTCTGGAAGAAATTTCACTGGTTCTGAAGATTGCATTGTTCTGCACCAGCGAGTCGCCACTAGATAGGCCTAGCATGCGTGAAGTAATATCAATGCTGATGGATGCCAGAGCCTCTGCTTATGATTCTTTTTCGTCTCCAGCATCGGAGGCGCCTATAGAAGATGATTCTTCTCTTAAACATTAG</cdnaseq>

Protein Sequence

<aaseq>MAASVARVLLAAAVFFAAVAAAAAASSSAAAVAALMEFKTKLDDVDGRLSSWDAAGGSGGGDPCGWPGIACSAAMEVTAVTLHGLNLHGELSAAVCALPRLAVLNVSKNALAGALPPGLAACRALEVLDLSTNSLHGGIPPSLCSLPSLRQLFLSENFLSGEIPAAIGNLTALEELEIYSNNLTGGIPTTIAALQRLRIIRAGLNDLSGPIPVEISACASLAVLGLAQNNLAGELPGELSRLKNLTTLILWQNALSGEIPPELGDIPSLEMLALNDNAFTGGVPRELGALPSLAKLYIYRNQLDGTIPRELGDLQSAVEIDLSENKLTGVIPGELGRIPTLRLLYLFENRLQGSIPPELGELNVIRRIDLSINNLTGTIPMEFQNLTDLEYLQLFDNQIHGVIPPMLGAGSNLSVLDLSDNRLTGSIPPHLCKFQKLIFLSLGSNRLIGNIPPGVKACRTLTQLQLGGNMLTGSLPVELSLLRNLSSLDMNRNRFSGPIPPEIGKFRSIERLILSENYFVGQIPPGIGNLTKLVAFNISSNQLTGPIPRELARCTKLQRLDLSKNSLTGVIPQELGTLVNLEQLKLSDNSLNGTIPSSFGGLSRLTELQMGGNRLSGQLPVELGQLTALQIALNVSYNMLSGEIPTQLGNLHMLEFLYLNNNELEGEVPSSFGELSSLLECNLSYNNLAGPLPSTTLFQHMDSSNFLGNNGLCGIKGKSCSGLSGSAYASREAAVQKKRLLREKIISISSIVIAFVSLVLIAVVCWSLKSKIPDLVSNEERKTGFSGPHYFLKERITFQELMKVTDSFSESAVIGRGACGTVYKAIMPDGRRVAVKKLKCQGEGSNVDRSFRAEITTLGNVRHRNIVKLYGFCSNQDCNLILYEYMANGSLGELLHGSKDVCLLDWDTRYRIALGAAEGLRYLHSDCKPKVIHRDIKSNNILLDEMMEAHVGDFGLAKLIDISNSRTMSAIAGSYGYIAPEYAFTMKVTEKCDIYSFGVVLLELVTGQSPIQPLEQGGDLVNLVRRMTNSSTTNSEIFDSRLNLNSRRVLEEISLVLKIALFCTSESPLDRPSMREVISMLMDARASAYDSFSSPASEAPIEDDSSLKH</aaseq>

Gene Sequence

<dnaseqindica>1..2941#3109..3497#ATGGCGGCATCCGTGGCGAGGGTGTTGCTCGCGGCGGCGGTCTTCTTTGCCGCTGTCGCTGCCGCCGCCGCGGCGTCGTCGTCGGCGGCGGCGGTGGCGGCGTTGATGGAGTTCAAGACCAAGCTGGACGACGTGGACGGGCGCCTCTCGAGCTGGGACGCGGCGGGCGGCAGCGGCGGCGGCGACCCGTGCGGGTGGCCCGGCATTGCCTGCTCCGCCGCGATGGAGGTCACCGCGGTGACGCTCCACGGCCTCAACCTCCACGGCGAGCTCTCCGCCGCCGTGTGCGCGCTCCCGCGCCTCGCCGTCCTCAACGTGTCCAAGAACGCGCTCGCCGGCGCGCTCCCGCCCGGCCTCGCCGCGTGCCGCGCCCTCGAGGTGCTCGACCTCAGCACCAACTCCCTCCACGGCGGCATCCCGCCGTCGCTCTGCTCCCTCCCGTCCCTCCGCCAGCTGTTCCTCAGCGAGAACTTCCTGTCCGGCGAGATCCCGGCGGCCATCGGCAACCTCACCGCCCTCGAGGAGCTCGAAATCTACAGCAACAACCTCACCGGCGGGATCCCGACCACCATCGCGGCGCTCCAGCGCCTCCGCATCATCCGCGCAGGGCTCAACGACCTCTCCGGCCCGATCCCCGTCGAGATCAGCGCGTGCGCCAGCCTCGCCGTGCTCGGCCTCGCCCAGAACAACCTCGCCGGCGAGCTCCCCGGCGAGCTCTCCCGCCTCAAGAACCTCACCACATTGATCCTCTGGCAGAACGCCCTCTCCGGCGAGATCCCGCCGGAGCTCGGCGACATCCCCAGCCTCGAGATGCTCGCCCTCAACGACAACGCCTTCACCGGCGGCGTCCCCAGGGAGCTCGGCGCGCTGCCATCCCTCGCCAAGCTCTACATTTACCGGAACCAGCTCGACGGCACCATCCCAAGGGAGCTCGGCGACCTCCAGAGCGCCGTCGAGATCGACCTCTCGGAGAACAAGCTCACCGGCGTCATCCCCGGCGAGCTCGGCCGGATTCCGACGCTCCGGCTGCTCTACCTCTTCGAGAACAGGTTGCAAGGAAGCATCCCACCGGAGCTCGGCGAGCTCAACGTCATCAGGAGGATTGATCTGTCCATCAACAACCTCACCGGCACAATTCCAATGGAGTTTCAGAACCTCACCGATTTGGAGTACCTGCAGCTGTTCGACAACCAAATCCATGGTGTCATCCCTCCTATGCTTGGTGCAGGCAGCAACCTTTCGGTGCTCGATTTGTCGGATAATCGGCTGACGGGGAGCATCCCACCTCACCTTTGCAAGTTCCAGAAGCTCATCTTCTTGAGCCTCGGATCGAACCGCCTCATCGGCAACATCCCCCCGGGCGTGAAGGCTTGTAGGACATTGACACAGCTCCAATTGGGGGGGAACATGCTCACCGGGAGCCTCCCCGTCGAGCTTTCGCTGCTGCGGAACCTGTCGTCGCTTGACATGAACCGGAACCGGTTCTCGGGACCGATACCACCCGAGATCGGCAAGTTCAGGAGCATAGAGAGGCTGATTTTGTCGGAGAATTACTTTGTTGGGCAGATCCCTCCTGGCATTGGCAACCTCACCAAGCTTGTCGCCTTCAATATATCGTCGAACCAGCTCACCGGACCGATTCCTCGGGAGCTGGCGCGGTGTACAAAGCTCCAGAGGCTTGATCTGAGTAAGAACTCCCTCACTGGAGTCATTCCTCAGGAGCTTGGCACACTGGTGAACCTGGAGCAACTGAAGCTATCTGACAATAGTCTGAATGGAACCATACCAAGCAGTTTCGGAGGCCTTTCCCGGCTCACCGAGCTGCAGATGGGAGGCAACCGCTTGTCCGGCCAATTGCCGGTCGAGCTTGGCCAGCTCACTGCGCTCCAGATTGCGCTGAATGTCAGTTACAACATGCTATCTGGTGAGATCCCGACTCAACTAGGAAACTTGCACATGCTGGAGTTCCTTTACTTGAACAACAATGAGCTAGAAGGTGAAGTCCCTTCCTCATTCGGAGAGCTCTCGAGTCTGCTGGAGTGCAACCTTTCTTACAACAATCTTGCCGGGCCGCTTCCCAGCACCACGCTGTTCCAGCACATGGACAGCAGCAATTTCCTGGGAAACAATGGCCTTTGTGGTATCAAAGGGAAATCATGTTCAGGATTATCAGGGTCAGCCTATGCAAGCAGGGAAGCAGCGGTGCAGAAGAAGCGGCTTCTCAGGGAGAAGATCATCAGCATTTCCTCCATTGTTATCGCGTTTGTCTCATTGGTGTTGATCGCAGTCGTTTGCTGGTCCTTGAAATCCAAGATACCTGATCTTGTATCGAACGAAGAGCGCAAGACTGGGTTTTCAGGTCCTCACTACTTCCTGAAGGAACGGATAACCTTTCAGGAGCTTATGAAGGTGACCGACAGCTTCTCAGAGAGTGCCGTAATTGGAAGGGGTGCTTGTGGCACTGTCTATAAGGCTATCATGCCTGATGGGAGAAGGGTTGCAGTGAAGAAGCTGAAGTGCCAGGGAGAAGGTTCCAATGTCGATAGAAGCTTTCGAGCTGAGATAACCACACTCGGAAATGTCAGGCACCGGAACATTGTCAAGCTGTATGGTTTCTGCTCCAATCAGGACTGCAATCTTATCCTGTATGAGTACATGGCAAATGGTAGCCTTGGAGAGTTGCTTCATGGTAGCAAGGATGTGTGTCTACTGGACTGGGACACCCGTTATCGGATCGCTCTCGGGGCTGCGGAAGGTCTGAGGTATCTTCACAGTGACTGCAAACCGAAGGTGATTCACCGTGACATAAAATCGAACAACATATTGCTTGATGAAATGATGGAGGCTCATGTAGGGGACTTTGGCTTGGCAAAACTGATTGATATTTCCAACTCCAGAACAATGTCTGCTATTGCCGGTTCATATGGCTACATTGCACCAGGTTAGATATGCTACTGACTCACCATGTTAGGTTAAAAGTTCAGAATTATTTATACCATCAAGTCAAATAGTTTCACTTGGTCTTTATACCATACAGTGGTAATTTATAGTTTGTTTAGTTGTTTTAACTGCTAAAGCTCTAATTCCATGATTCTTATGGTAATGCAGAGTATGCTTTTACCATGAAGGTGACTGAAAAATGTGACATTTATAGCTTCGGGGTAGTCTTGTTGGAGCTAGTGACGGGACAATCTCCGATTCAACCTCTTGAGCAAGGAGGGGATCTTGTCAATCTAGTGAGGCGGATGACAAACAGTTCGACAACAAATTCTGAAATTTTTGACAGCAGGCTGAATCTGAACTCAAGGAGGGTTCTGGAAGAAATTTCACTGGTTCTGAAGATTGCATTGTTCTGCACCAGCGAGTCGCCACTAGATAGGCCTAGCATGCGTGAAGTAATATCAATGCTGATGGATGCCAGAGCCTCTGCTTATGATTCTTTTTCGTCTCCAGCATCGGAGGCGCCTATAGAAGATGATTCTTCTCTTAAACATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024808