BGIOSGA024829

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Revision as of 06:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024829| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024829, complete gene.| tag = OsI_248...")
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Gene Name

BGIOSGA024829

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024829, complete gene.

LocusTag

OsI_24881

Ensembl Transcript ID

BGIOSGA024829-TA

Ensembl Protein ID

BGIOSGA024829-PA

Length

4304

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2335896..2340199

Sequence Coding Region

2339134..2340199,2336631..2338073),complement(2335896..2336479

Genome Context

<gbrowseImage1> name=IndicaChromosome07:2335896..2340199 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:2335896..2340199 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGATTCTTGGGAGTTTTTTGGTGCTGCTCCTGCTTGCTGCCCCTGCATTTGGCCAGCTACCTTCACAGGACATCCTTGCGCTCCTTGCTTTCAAGAAGGGCATCACTCATGACCCTGCTGGATTCATCACCGATTCGTGGAACGACGAGTCGATTGATTTCAATGGCTGTCCGGCTTCCTGGAACGGCATCGTGTGCAATGGCGCAAACGTGGCAGGGGTTGTGCTTGATGGCCATGGCATCTCCGGTGTCGCCGATCTGTCCGTGTTCGTCAATCTGACTATGCTTGTGAAGCTCTCTATGGCCAATAACAATCTGTCTGGGAGCCTGCCGAGCAATGTGGGTAGTCTGAAGAGCCTGAAGTTCATGGATATCTCAAACAACCGGTTCTCGGGGCCGATTCCTGATAACATAGGCAATCTCCGGAGCCTGCAGAACCTGTCGCTTGCCAGGAACAACTTCTCAGGGCCACTGCCTGACTCCATCGATGGGCTTGCGTCGCTTCAGTCACTGGATGTGAGTGGAAACTCTTTGTCTGGTCCATTGCCTTCATCTCTGAAAGGTCTCCGCAGCATGGTTGCTCTGAACCTCTCATACAATGCCTTCACAAAGGGCATCCCATCTGGGCTTGGCCTTCTTGTGAATCTCCAATCTTTGGATCTAAGCTGGAATCAATTGGAAGGCGGTGTTGATTGGAAATTCTTGATTGAGTCAACTGTTGCTCATGTTGACTTCAGTGGGAACTTGCTCACCAGTACCACCCCCAAAGAGCTCAAGTTCCTGGCAGATATTTCAGAGACAGTTCTATATCTCAACTTGAGCAACAATAAGTTGACTGGGTCATTGATTGATGGAGTTGAGCTCTCGACATTTGGGAGATTGAAGGTGCTTGATCTGAGCCATAATCAGTTATCTGGAGACTTGCCAGGGTTCAATTATGTCTATGATCTTGAAGTTTTGCGACTGGCAAACAATGCATTCACGGGGTTTGTACCTAGTGGACTTCTGAAAGGGGATTCTCTGGTTCTCAGTGAGCTGGACCTGAGTGCAAATAATCTGACTGATCTGTCAAATAACAAGTTTAAAGGAAATTTGTCAGTTATTGCCAAATGGAGCAATGATTTGGAGTATGTTGATCTTAGCCAGAACAATCTAACTGGAACAATTCCTGATGTGAGCTCTCAATTCCTTCGCTTGAACTACCTGAATCTTTCCCATAATTCCCTAGCTGACACCATCCCTGAAGCTGTTGTTCAGTACCCCAAACTCACTGTCCTTGATCTCAGCTCCAATCAGTTCAGAGGTCCTATTCCTGCTAATTTACTCACTTCGTCCATGCTGCAAGAGCTCTACATCCACGACAATATGCTTAGTGGAGGTCTATCATTTCCAGGATCATCGTCAAAAAATCTGAGTCTTCAAGTTCTTGATATTTCTGGAAATCACTTTAATGGCAGCCTCCCTGATGAAATAGCATCTTTATCTAGCCTCCAAGCTCTTGATATATCTACAAACAATTTCTCTGGTCCTTTGCCAGCCTCTATCACCAAGCTTGCAGCGCTCACTGCTCTCGACATATCAATAAACCAGTTCACTGGGTCATTGCCTGATGCACTTCCAGATACATTGCAATCATTCAATGCCTCTTATAATGATCTATCTGGTGTTGTTCCAGTGAACTTGAGGAAGTTTCCAGAATCTTCCTTCCATCCTGGGAACTCGAGACTAGACTATCCTGCTAGCTCTTCTGGGTCTGGCAGTTCCTCTGGTTCAGCTGGTGGCAGGTCACTCAGTGCAGCAGCTAAAATAGCACTTATAGCAGCTAGTATCGTTGCTCTTGTCATCCTTATCCTTGTTGCCATTGTTTGCCATTACAAGCAAATCTCACGGCAGTTCCCTAGCTCAGAAAAGGTTTCAGACAAGAACCTCCACAAGACTAGCAAAGACATGGCCAGTACAAAAGGAAAGGATGACAAAGGTGGTTTGGTGGTCTCAGCAGATGAGCTTGGTGCTCCTCGAAAGGGCTCTACATCTGAAGCACTAAGCCAAGAAGAGAAGCTGTCAGGTGTAGGGGGATTTTCCCCATCCAAAGGTAGCCGCTTCTCTTGGTCACCAGATTCTGGAGAGGCATACACCCAGGAAGGCCTGGCACGGTTGGATGTCAGATCACCTGACAGGTTAGCAGGGGAGTTGCACTTCCTGGATGAAACAATCACACTGACACCGGAGGAATTGTCAAGGGCACCGGCTGAGGTTCTTGGGAGGAGCAGCCACGGGACTTCGTACAGAGCAACACTTGAGAATGGTGTCTTCCTAACAGTGAAATGGCTGAGGGAAGGTGTTGCAAGGCCCAAGAAAGAGTTCTCGAAGGAGGCCAAGAAGTTTGCAAACATTAGGCATCCCAATGTTGTTGGCTTGCGTGGTTACTACTGGGGTCCAACAGCACATGAAAAACTGATCTTGTCGGATTATGTTTCACCAGGAAGTCTTGCGAGCTTTTTGTACGATCGTCCAGGAAGGAGAGGCCCTCCACTGACCTGGGCGCAACGGCTGAAGATCGCAGTTGATGTCGCGCGTGGCCTGAACTACCTCCATTTTGACCGAGCGATGCCTCATGGAAACCTCAAGGCTACCAACATCTTGTTGGACGGACTTGACCTCAATGCCCGTGTCGCTGACTACTGCCTGCACCGCCTGATGACCCAGGCTGGAGTTGTTGAGCAGATCCTCGACCTGGGCGTGCTAGGCTACCGTGCCCCAGAGCTAGCAGCGTCCAAGAAGCCATCTCCCTCGTTCAAGTCTGACGTGTACGCCTTCGGTGTCGTGCTGCTGGAGCTCCTAACTGGCAGGTGTGCTGGGGATGTTGTCTCGGGTTCTGAAGGTGGTGTTGACCTGACTGATTGGGTCCGTCTGCGGGTGGCTGAAGGTCGGGGATCAGATTGCTTTGATCCAGCCATGGCTTCAGATTCTGAGAACCAAGTTTCTGTCAAGGGCATGAAGGATGTGCTGGGCATTGCCTTGAGATGCATCCGGCCGGTCTCTGAAAGACCTGGGATCAAGTCTGTGTATGAGGATCTTTCATCAATCTAG</cdnaseq>

Protein Sequence

<aaseq>MGILGSFLVLLLLAAPAFGQLPSQDILALLAFKKGITHDPAGFITDSWNDESIDFNGCPASWNGIVCNGANVAGVVLDGHGISGVADLSVFVNLTMLVKLSMANNNLSGSLPSNVGSLKSLKFMDISNNRFSGPIPDNIGNLRSLQNLSLARNNFSGPLPDSIDGLASLQSLDVSGNSLSGPLPSSLKGLRSMVALNLSYNAFTKGIPSGLGLLVNLQSLDLSWNQLEGGVDWKFLIESTVAHVDFSGNLLTSTTPKELKFLADISETVLYLNLSNNKLTGSLIDGVELSTFGRLKVLDLSHNQLSGDLPGFNYVYDLEVLRLANNAFTGFVPSGLLKGDSLVLSELDLSANNLTDLSNNKFKGNLSVIAKWSNDLEYVDLSQNNLTGTIPDVSSQFLRLNYLNLSHNSLADTIPEAVVQYPKLTVLDLSSNQFRGPIPANLLTSSMLQELYIHDNMLSGGLSFPGSSSKNLSLQVLDISGNHFNGSLPDEIASLSSLQALDISTNNFSGPLPASITKLAALTALDISINQFTGSLPDALPDTLQSFNASYNDLSGVVPVNLRKFPESSFHPGNSRLDYPASSSGSGSSSGSAGGRSLSAAAKIALIAASIVALVILILVAIVCHYKQISRQFPSSEKVSDKNLHKTSKDMASTKGKDDKGGLVVSADELGAPRKGSTSEALSQEEKLSGVGGFSPSKGSRFSWSPDSGEAYTQEGLARLDVRSPDRLAGELHFLDETITLTPEELSRAPAEVLGRSSHGTSYRATLENGVFLTVKWLREGVARPKKEFSKEAKKFANIRHPNVVGLRGYYWGPTAHEKLILSDYVSPGSLASFLYDRPGRRGPPLTWAQRLKIAVDVARGLNYLHFDRAMPHGNLKATNILLDGLDLNARVADYCLHRLMTQAGVVEQILDLGVLGYRAPELAASKKPSPSFKSDVYAFGVVLLELLTGRCAGDVVSGSEGGVDLTDWVRLRVAEGRGSDCFDPAMASDSENQVSVKGMKDVLGIALRCIRPVSERPGIKSVYEDLSSI</aaseq>

Gene Sequence

<dnaseqindica>1..1066#2127..3569#3721..4304#ATGGGGATTCTTGGGAGTTTTTTGGTGCTGCTCCTGCTTGCTGCCCCTGCATTTGGCCAGCTACCTTCACAGGACATCCTTGCGCTCCTTGCTTTCAAGAAGGGCATCACTCATGACCCTGCTGGATTCATCACCGATTCGTGGAACGACGAGTCGATTGATTTCAATGGCTGTCCGGCTTCCTGGAACGGCATCGTGTGCAATGGCGCAAACGTGGCAGGGGTTGTGCTTGATGGCCATGGCATCTCCGGTGTCGCCGATCTGTCCGTGTTCGTCAATCTGACTATGCTTGTGAAGCTCTCTATGGCCAATAACAATCTGTCTGGGAGCCTGCCGAGCAATGTGGGTAGTCTGAAGAGCCTGAAGTTCATGGATATCTCAAACAACCGGTTCTCGGGGCCGATTCCTGATAACATAGGCAATCTCCGGAGCCTGCAGAACCTGTCGCTTGCCAGGAACAACTTCTCAGGGCCACTGCCTGACTCCATCGATGGGCTTGCGTCGCTTCAGTCACTGGATGTGAGTGGAAACTCTTTGTCTGGTCCATTGCCTTCATCTCTGAAAGGTCTCCGCAGCATGGTTGCTCTGAACCTCTCATACAATGCCTTCACAAAGGGCATCCCATCTGGGCTTGGCCTTCTTGTGAATCTCCAATCTTTGGATCTAAGCTGGAATCAATTGGAAGGCGGTGTTGATTGGAAATTCTTGATTGAGTCAACTGTTGCTCATGTTGACTTCAGTGGGAACTTGCTCACCAGTACCACCCCCAAAGAGCTCAAGTTCCTGGCAGATATTTCAGAGACAGTTCTATATCTCAACTTGAGCAACAATAAGTTGACTGGGTCATTGATTGATGGAGTTGAGCTCTCGACATTTGGGAGATTGAAGGTGCTTGATCTGAGCCATAATCAGTTATCTGGAGACTTGCCAGGGTTCAATTATGTCTATGATCTTGAAGTTTTGCGACTGGCAAACAATGCATTCACGGGGTTTGTACCTAGTGGACTTCTGAAAGGGGATTCTCTGGTTCTCAGTGAGCTGGACCTGAGTGCAAATAATCTGACTGGTAATGAGCTCTACCTGAAAATTGTTCTTCTTACACCTTTTGTTCCTTTTCTCTTCATACCATGTGGATGCCCATTCTGATTTAAAAAAATTGGATGTGGGGCTCCTTCACAAAAGGTCCAGCCTCCAAAACAGATCGGTAGTGTTCAGCTTGCATAAAACTTTGAATCGGCATCTTACATTAGTGTTCTTAGTTCATTATACCAATTGATTCTCTCATTTCAATGATGTACTGATCTGTTGATTACATTACACAGCATGGCATGAGCTTTTACTGATCTGTGGTTGAGTGTGCACCAGTGTAGGTCATTTGATTGTTTTGTCTTATGCCAATTCTATATTTGCATTCTTCTTGTTTTGCGTGAAAGGTTCTTTCTTGGAATCTTTGCTCCTAGCCTCCTACTGACTAATAATTTTCTCCAAAGCAATTACTGGATCAGTGATGGCTAGCTTGTGATAGTTTTGGTCATGAAGAGAGACGTTATTTATTATGCATGCATACCCCAATGGTATTATTGAGAATATTTGAAAGTAGTTTGTGATGGATTTCTGTTCCACAGTAATGTTAAATGCATTGTGTAGTTGCAGTGACAGTACATGTATCTTAACCTTTGTTGTTAGATCTTCACCTTTGGATGTTGTGAAAAATACAATTATTAATAGGACGCAGCTAGTTGTATATACCTGACTGGGTGTATGAGTAAGAATACTGAACTGTTGCATTTCAAAATATTATGTCTCACAGATTATATCTTGCATTTGAGTAAAGTCATCACTCCTAGAACTCAATGCATTCATCATAGTTATCTAAATTGTTATTAAAAGAGCAGGACAACTCAAACACGCTCCTATGTTTTCTGTCATATCATGACATTTCTCTTAAAACAAAAGTATCACTTTTAAGTTCCACTTGTGTTATTTTGGACTAACAATATTTTTCGTTAATCCACAGGACACATCAATATGATCACATCGACCACCTTGCAAGTTATTAATCTTCCTTTCCTCCAATGCTCTCTTTGGGGATCTTCCAATGCTTGCTGGAAGCTGCACTGTGTTAGATCTGTCAAATAACAAGTTTAAAGGAAATTTGTCAGTTATTGCCAAATGGAGCAATGATTTGGAGTATGTTGATCTTAGCCAGAACAATCTAACTGGAACAATTCCTGATGTGAGCTCTCAATTCCTTCGCTTGAACTACCTGAATCTTTCCCATAATTCCCTAGCTGACACCATCCCTGAAGCTGTTGTTCAGTACCCCAAACTCACTGTCCTTGATCTCAGCTCCAATCAGTTCAGAGGTCCTATTCCTGCTAATTTACTCACTTCGTCCATGCTGCAAGAGCTCTACATCCACGACAATATGCTTAGTGGAGGTCTATCATTTCCAGGATCATCGTCAAAAAATCTGAGTCTTCAAGTTCTTGATATTTCTGGAAATCACTTTAATGGCAGCCTCCCTGATGAAATAGCATCTTTATCTAGCCTCCAAGCTCTTGATATATCTACAAACAATTTCTCTGGTCCTTTGCCAGCCTCTATCACCAAGCTTGCAGCGCTCACTGCTCTCGACATATCAATAAACCAGTTCACTGGGTCATTGCCTGATGCACTTCCAGATACATTGCAATCATTCAATGCCTCTTATAATGATCTATCTGGTGTTGTTCCAGTGAACTTGAGGAAGTTTCCAGAATCTTCCTTCCATCCTGGGAACTCGAGACTAGACTATCCTGCTAGCTCTTCTGGGTCTGGCAGTTCCTCTGGTTCAGCTGGTGGCAGGTCACTCAGTGCAGCAGCTAAAATAGCACTTATAGCAGCTAGTATCGTTGCTCTTGTCATCCTTATCCTTGTTGCCATTGTTTGCCATTACAAGCAAATCTCACGGCAGTTCCCTAGCTCAGAAAAGGTTTCAGACAAGAACCTCCACAAGACTAGCAAAGACATGGCCAGTACAAAAGGAAAGGATGACAAAGGTGGTTTGGTGGTCTCAGCAGATGAGCTTGGTGCTCCTCGAAAGGGCTCTACATCTGAAGCACTAAGCCAAGAAGAGAAGCTGTCAGGTGTAGGGGGATTTTCCCCATCCAAAGGTAGCCGCTTCTCTTGGTCACCAGATTCTGGAGAGGCATACACCCAGGAAGGCCTGGCACGGTTGGATGTCAGATCACCTGACAGGTTAGCAGGGGAGTTGCACTTCCTGGATGAAACAATCACACTGACACCGGAGGAATTGTCAAGGGCACCGGCTGAGGTTCTTGGGAGGAGCAGCCACGGGACTTCGTACAGAGCAACACTTGAGAATGGTGTCTTCCTAACAGTGAAATGGCTGAGGGAAGGTGTTGCAAGGCCCAAGAAAGAGTTCTCGAAGGAGGCCAAGAAGTTTGCAAACATTAGGCATCCCAATGTTGTTGGCTTGCGTGGTTACTACTGGGGTCCAACAGCACATGAAAAACTGATCTTGTCGGATTATGTTTCACCAGGAAGTCTTGCGAGCTTTTTGTACGGTAATGCTCTCATTTACTGGTTTCTCATTTCTGCAATTGAACACATCAGGCTTAGAGATCTTGTATACTCCATCTGCAAATGCATGTGACTGGTTGGTTACCAATATGTTCAGTCTCTAACTAAGCTTTATGTTCCTCTGAAACCTAGCAGATCGTCCAGGAAGGAGAGGCCCTCCACTGACCTGGGCGCAACGGCTGAAGATCGCAGTTGATGTCGCGCGTGGCCTGAACTACCTCCATTTTGACCGAGCGATGCCTCATGGAAACCTCAAGGCTACCAACATCTTGTTGGACGGACTTGACCTCAATGCCCGTGTCGCTGACTACTGCCTGCACCGCCTGATGACCCAGGCTGGAGTTGTTGAGCAGATCCTCGACCTGGGCGTGCTAGGCTACCGTGCCCCAGAGCTAGCAGCGTCCAAGAAGCCATCTCCCTCGTTCAAGTCTGACGTGTACGCCTTCGGTGTCGTGCTGCTGGAGCTCCTAACTGGCAGGTGTGCTGGGGATGTTGTCTCGGGTTCTGAAGGTGGTGTTGACCTGACTGATTGGGTCCGTCTGCGGGTGGCTGAAGGTCGGGGATCAGATTGCTTTGATCCAGCCATGGCTTCAGATTCTGAGAACCAAGTTTCTGTCAAGGGCATGAAGGATGTGCTGGGCATTGCCTTGAGATGCATCCGGCCGGTCTCTGAAAGACCTGGGATCAAGTCTGTGTATGAGGATCTTTCATCAATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024829