BGIOSGA024846

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Revision as of 06:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024846| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024846, complete gene.| tag = OJ1417_...")
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Gene Name

BGIOSGA024846

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024846, complete gene.

LocusTag

OJ1417_E01.122

Ensembl Transcript ID

BGIOSGA024846-TA

Ensembl Protein ID

BGIOSGA024846-PA

Length

6414

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2091073..2097486

Sequence Coding Region

2097105..2097486,2096068..2096450),complement(2094712..2094911,2094146..2094313),complement(2093702..2094013
,2093087..2093245),complement(2092849..2093001,2092562..2092741),complement(2092282..2092452
,2091765..2092184),complement(2091515..2091652,2091263..2091388),complement(2091073..2091187

Genome Context

<gbrowseImage1> name=IndicaChromosome07:2091073..2097486 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:2091073..2097486 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTTCTACTCCGACGACTCCGACCCGGACATCGACGAGGACCTGCAGAGGGACCTGGACGCGCTGCGCCAATCCTGCATCCTCTCCGGGAACGACCCCGACGCGGCGGTCGCGCAGGTCTCCGCCTGCCTCGCCGCCCCGCCGGCGGCGGCGGCGGGAGCGGAGGTGAATGGCTTGTCTGATGACGACGACGAGGAGGAGGACGAGGATTTGGCCCTCGTCCGCAGCATACGTGAGAATCTCCTCCTCAACAAGGCCTCGCCGTCCTCGCCCCTGCCGCGCCCGATCTGCGCCTGGCCGCCCTCCGACTCGGAGGACGACGAGGACGACCTCGAGACGCTCCGCGCGATACAGCGCCGGTTCTCGCACTACCACTCCGGTACCTCCAGTGGGTCAGAGATGAACACAAAAACTGAGGCATCAAAGGAAGGGAGTGGCAATATTTTTGGAAATGAACTTGATGAAGAATTTGATGCGGAGAAGCACAATAAAGAGGCAACTACCAGAACTGGGTTTCCTAAAGCTGCCTTGTTGTTAGTGGATGCTCTTAAGAAGAACAGAGCATGCCAGAAGTTCATTAGAAGGAAGATGATTACCATTGAAGCAAAAATTGAAGAAAATAAGGATCTCAGGGATCGTGTAAAATGTCTTTTGGATTATCAATTAAGCTGCAGAAAAGCATTTGGCAAAATTTTGTGCCAAAAGGAGGATCCTCGTGTTAGATTGATCTCCTCTCGAAAGCCATGTGCACAATCAACGAAGAATAAAGATAAGAAGACACCTGCATTATTTCTTGGCCCTGCAGATAACCCTCATGTTTCAAAGTACAAAATGGTACTGAAGCAACTCCCTATGTCTCTTCAGAAGCAACCGTGGTCAGATGTTGAGAAAGAGAAACTTGCTAAAGGAATAAAGCAGCAATACCAAGAGGCATTGATTTTGAACTCGATCAATAAAGGAAGTTCCACCGGTGACTTCAGTGCTGTAGATATGGCATATGCACTGACGAATACTGCTGGCAATTTTGAGGTTACTCCCGAAAGTCTTAGATCGGTCCTGCCATTAATAAACTGGGACAAAATAGCTGCTATGTACCTGCCTGGTCGATCTGGTGCTGAATGTGAATCGAGGTGGCTAAACTTTGATGATCCATTGATTAGTCATAATGCCTGGACTGCTCGGGAGGAAAAAAGACTTATACTAACTGTTCAACAGCAAGGAATGAATAACTGGATTAACATTGCAGTTACATTGGGTACTCACAGGACACCTTTCCAGTGCCTTGTTCGTTATCAGCGAAGTCTTAATCACTGCATATTGAATAAGGACTGGGCTGAAGAAGAAGATCTTCAACTTCAAGCTGCTGTCAACACCTTTGGAACTAATTGGCAACTTGTATCAGCTAGTATGGATGGTCGCACTGGCAATCAGTGCTCTAACAGGTGGAGAAAAACCTTAAACCCTGAAAGGTCAAGAGTGGGGAGATGGTCTCTTGATGAGGATAAACGCCTCATGGTAGCTGTGAAGTTGTTTGGGTCTGGCAGCTGGAATAAGATTGCTCAGTTCATTCCTGGTCGCACACAGAGTCAGTGCAATGAAAGGTGGCGCAATGTTCTTGATCCTGATATAGATCTTGGGGAATGGCGACCTGAAGAAGACTCCATACTATTGGCATCAGTCGATGAGTTTGGGCCTTGCTGGTCCAAGATTGCTGGGGCGAAGATTCCTCACCGTACTGACAATATGTGCTTGAGAAGATGGAGAAAGTTGTGTCAAGATAAATTGCCTTCAGTTAAGGCAGCTCAACAAATAAAGAAATCCATTCTTCAATGCAACTTTGTTGACAGAGAAACAGAGCGACCTGCCATTGGACCCAGTGACTTAATGCCACTTGTTCGCTCCAAAGTTGATGGAAGTGATGAGAACACTGTGAGTGCTAAAGTCAGGAAGCCCCGAAAACGTTCTAGAATACCATGTGAGGACAATGTACTCCCTGGTGACACATCAAATTCTTCACCTTCTATGAATCTACCTCTTTCTGAATCTATTGATGCTGAGGCTGCTGTAAACACAACCACAGCAAATTCAAAGAAGAAACCATCTAGAAGTAGATCGAAAAAGCAAACTGATGAAAATCTTGCTGTCTGTGATGTCAACAACTCTTCTAATTGTTCTAGTGGAGCCAGGAAGAGAAAGAGATCTATTACTGACAAAAATCAAGTTGTGCAAAAGAAAATGAAGGGGTCTATCTCTGGTGATAATGAGGCTGTCGTAGAGACAGTGGGCACTATCAGTGCTGATAATGAGGTAGCCACGAAACGGAAGACTGGCTCTACATCTGTTGGTGAAGAAGGCACAACCAAGAAGACAACGAGGGGCTCTCTCTCTGGTAAAGGAGAAGTCAACAAGAGAATGAGGGGCTCTATCTCTGGTGTTCAGAAGGGAGCAACCAAACAAAGAATGAGGGGTTCAGTCTCTACTGATAATCATGGTGCTGTAATGAAAAGCAAGAGAGCACCATCAAGGAAATCAGCCGAAGAGAACTCAAAAGCTGATAGCATGGCTAATGCAGCCTTTGGGTCGGACCTTCCAACTGTGGCTTCTGAAGATAGAGATGCTAATAATGGAAATGTGAAAAATGGGAGACTCAAGTCAATGCCGAGACCCAAGCAGATAAACATGACTGAGGGATCTGCAGACAAATTTTCCACATCCACGCGGCTTGCTGATTGCATGTCATTCGGCCGAATCAATGGATCCAGCAGGGTTGCAAGACACTTATGTGTGAGTGTCAAGCCGTTAAGCAACATGATCCAATCAAATGGACCTTCTGATGTGTCAGCTAAGGATCCCACTTCTGCTGAAACAGATCCCACTTCTGTTGAGAATAGCAACACCGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MDFYSDDSDPDIDEDLQRDLDALRQSCILSGNDPDAAVAQVSACLAAPPAAAAGAEVNGLSDDDDEEEDEDLALVRSIRENLLLNKASPSSPLPRPICAWPPSDSEDDEDDLETLRAIQRRFSHYHSGTSSGSEMNTKTEASKEGSGNIFGNELDEEFDAEKHNKEATTRTGFPKAALLLVDALKKNRACQKFIRRKMITIEAKIEENKDLRDRVKCLLDYQLSCRKAFGKILCQKEDPRVRLISSRKPCAQSTKNKDKKTPALFLGPADNPHVSKYKMVLKQLPMSLQKQPWSDVEKEKLAKGIKQQYQEALILNSINKGSSTGDFSAVDMAYALTNTAGNFEVTPESLRSVLPLINWDKIAAMYLPGRSGAECESRWLNFDDPLISHNAWTAREEKRLILTVQQQGMNNWINIAVTLGTHRTPFQCLVRYQRSLNHCILNKDWAEEEDLQLQAAVNTFGTNWQLVSASMDGRTGNQCSNRWRKTLNPERSRVGRWSLDEDKRLMVAVKLFGSGSWNKIAQFIPGRTQSQCNERWRNVLDPDIDLGEWRPEEDSILLASVDEFGPCWSKIAGAKIPHRTDNMCLRRWRKLCQDKLPSVKAAQQIKKSILQCNFVDRETERPAIGPSDLMPLVRSKVDGSDENTVSAKVRKPRKRSRIPCEDNVLPGDTSNSSPSMNLPLSESIDAEAAVNTTTANSKKKPSRSRSKKQTDENLAVCDVNNSSNCSSGARKRKRSITDKNQVVQKKMKGSISGDNEAVVETVGTISADNEVATKRKTGSTSVGEEGTTKKTTRGSLSGKGEVNKRMRGSISGVQKGATKQRMRGSVSTDNHGAVMKSKRAPSRKSAEENSKADSMANAAFGSDLPTVASEDRDANNGNVKNGRLKSMPRPKQINMTEGSADKFSTSTRLADCMSFGRINGSSRVARHLCVSVKPLSNMIQSNGPSDVSAKDPTSAETDPTSVENSNTA</aaseq>

Gene Sequence

<dnaseqindica>1..382#1037..1419#2576..2775#3174..3341#3474..3785#4242..4400#4486..4638#4746..4925#5035..5205#5303..5722#5835..5972#6099..6224#6300..6414#ATGGATTTCTACTCCGACGACTCCGACCCGGACATCGACGAGGACCTGCAGAGGGACCTGGACGCGCTGCGCCAATCCTGCATCCTCTCCGGGAACGACCCCGACGCGGCGGTCGCGCAGGTCTCCGCCTGCCTCGCCGCCCCGCCGGCGGCGGCGGCGGGAGCGGAGGTGAATGGCTTGTCTGATGACGACGACGAGGAGGAGGACGAGGATTTGGCCCTCGTCCGCAGCATACGTGAGAATCTCCTCCTCAACAAGGCCTCGCCGTCCTCGCCCCTGCCGCGCCCGATCTGCGCCTGGCCGCCCTCCGACTCGGAGGACGACGAGGACGACCTCGAGACGCTCCGCGCGATACAGCGCCGGTTCTCGCACTACCACTCCGGTGAGTTGATTCGCTCTCCCTTTGTTTGTTCGCGGCATATGCTCTAAGATAGGTTCCATGTGGTGTGCTAATCGATTTATACATTAGGACAGGAATAGGATGATTTTGTATGATACGACCTGGGAATCCGAATAACTGGGATAAACTTGCAAGGTACTTGACTCTTTGATCAAAACATAAATTACCCAATTCAACTCGTCTTCTATAAAATATGCTCTTGCATCGGTATATAATGTTTTTATGGGTTCTCTAGGGTTTATACTTCCTTAATTGTTGTAGCTGTAGAAGAAATTTAAGCTATGTAACACACTTGCTACATATGGTGTTATCTTCATCAGACCTTACTTCTAAAACATGGAATAGAATCTGTGCAAACTATATTTGTTCCTTAGAGCCACCAATATAATATATATAATTGAAGAAATAATATGATGTAACTAAGTCTCTGACGTATAGATATATAGTAAGTAAATTACATGTGGAGAACAGCCATGTCAAGTTATTTGTGTTTGTTCTTTTTCAGCTGTACATATCAATAGTTCAGTACATAATTGAAAAAAAAACATGTACAGTCTTTGTGTAATTCTTGATGCAGCAAATGAGTGTTTCATTGTACTCGAATGAGTCCTTAGTATTTTGATTTGCTTAATGCAGGTACCTCCAGTGGGTCAGAGATGAACACAAAAACTGAGGCATCAAAGGAAGGGAGTGGCAATATTTTTGGAAATGAACTTGATGAAGAATTTGATGCGGAGAAGCACAATAAAGAGGCAACTACCAGAACTGGGTTTCCTAAAGCTGCCTTGTTGTTAGTGGATGCTCTTAAGAAGAACAGAGCATGCCAGAAGTTCATTAGAAGGAAGATGATTACCATTGAAGCAAAAATTGAAGAAAATAAGGATCTCAGGGATCGTGTAAAATGTCTTTTGGATTATCAATTAAGCTGCAGAAAAGCATTTGGCAAAATTTTGTGCCAAAAGGAGGATCCTCGTGTTAGATTGATCTCCTCTCGAAAGCCATGTGCACAATCAACGAAGGTAATTATCATTTTGTATCTACATCTATGTATCGGATGTTTGCCAATGACATGCCTATGGATACATATCTGACATGGACTTTCTATTGCCTGAGAGCCACCAAGATTCGTGATTGTTGTAGCCAAATCGATTTTGTACATTTATTTGTAGTTCGCGAAGGTAGTTGTAGTTTCCTGTATGAACAAAAGTTAGTTAGTTTTGTATCGCGTGAACTAAATTAGAGTGTCTTCTGACAACTAGGATCATTTGCTGTTTCCTAGGTGGCGCTGGGTACTATTTTTTTGTTCTATGACATGTTAGAATTTTCCCTATGGTTGAAATGTATGACTTGTTCACTGTGATCAATTTGTCATGGAATTTCTAGGCATTGTTATAGTTTTATTGTTAAAAATTCGTACAAATTTTGTTCCACTACTTATATGGCTTGAAACAATGAATTTAAGGCAGATATGTTTCCCATTTACGTGACATCATTTTATGGCATGCTTAACATGGGAGTAATGTAGTTGTGTAGCACAAATTTATTAAGAGAAAATAGAATGGAGTAAAGTTATGTTTTTACCCCACAAAAGTTTCTTGTAACTTTGACAAGCTGAAAGTGAGCATCACTTGTTTAAGTTACTTTACTGACAATGTATGCTGTTCATCTGTTTTGATTTCTCTTAATCATCAATTCCACTTAGTTTTATATTAATAAAATAATATATAAGTATGCTTGTTATGGTGGATCTTGTCTTTGGAAAGTTCACTTTCCAGTTTCAATAAAGAGTTATATTGGAAACTAGCACTGGAAATTCAACTCTAAGATCAATAGTCCTCTTAGTTATGCTATGCTTGAGATCTTTTTACTGTCAAGAAGGTCGTACTTTATTTTTGAATTGCAGCTTGAGTAAGTTATTTCATGGATCAACTCAGTTGATGTGTCATTTTATTTTATATACATATTCTGTTGTTATTCTGACCACTGAGATTTAATATTGAGTACATGTTCCACAAACCTTCATATCTGATCTCTCCATCTTCTGGAGTTTTTCTTTTTTATATTGCTTATGGGCTCCCAATTTCTTGCAGCCATGTTTGATTAAGCAAAGTATCCTTTTAGATTTGCTATTAGTAGAATGCATATACTTACAATGAAGCAAATCTTTTGGTGCAGAATAAAGATAAGAAGACACCTGCATTATTTCTTGGCCCTGCAGATAACCCTCATGTTTCAAAGTACAAAATGGTACTGAAGCAACTCCCTATGTCTCTTCAGAAGCAACCGTGGTCAGATGTTGAGAAAGAGAAACTTGCTAAAGGAATAAAGCAGCAATACCAAGAGGCATTGATTTTGAACTCGATCAATAAAGGAAGGTGATACTGAGTTGTTTAACAGTTTCCATCATCGGGGGCATTTCTCGTAAATTTTGGGTGATATTTTATTTCGTGAATTAGTTTCTTGTAAATAAGTGTTCTTTATCCTTTTTGATGATATTCCCTAGTTTTTCTCTTTAGGTATTTTTTATGGTTCAAGGATGTGAAAATGAAATGAAAGATATTCTATGTCTTAATGTACTGCTTGAATGCCTGATCACTGTTTGTTAGTGTTTTCTCTGATGGGGGCAGTTTTCTGCTCCTGTCTATATCTGCTATTGGAGTATTTGTTTTCCACATGAAATGTAGGATCGATGCTAATCTAGTAATCTTTATGTTTTTCCTGTAATTTTACTGTGCTCTGCCAGATGTTTAAAATAATACTTGTTATGATGCAGTTCCACCGGTGACTTCAGTGCTGTAGATATGGCATATGCACTGACGAATACTGCTGGCAATTTTGAGGTTACTCCCGAAAGTCTTAGATCGGTCCTGCCATTAATAAACTGGGACAAAATAGCTGCTATGTACCTGCCTGGTCGATCTGGTGCTGAATGTGAATCGAGGTACTTTCACTTTTGTTATTTTTAATTGCTTCAAGTATACATCACAAGTCCCCTCTCTTTTATGTGCCTTGCAACACGTATTGACCTGTGGACAACTTGTGATTCTTAAAGAATTTCGCTTTCCTTGTCTAGGTGGCTAAACTTTGATGATCCATTGATTAGTCATAATGCCTGGACTGCTCGGGAGGAAAAAAGACTTATACTAACTGTTCAACAGCAAGGAATGAATAACTGGATTAACATTGCAGTTACATTGGGTACTCACAGGACACCTTTCCAGTGCCTTGTTCGTTATCAGCGAAGTCTTAATCACTGCATATTGAATAAGGACTGGGCTGAAGAAGAAGATCTTCAACTTCAAGCTGCTGTCAACACCTTTGGAACTAATTGGCAACTTGTATCAGCTAGTATGGATGGTCGCACTGGCAATCAGTGCTCTAACAGGTGATTTTTTTTTTGGCCTTCTCTTGCAATTGGCTATTACCATGTGTGATTTTGCTCTTTGTTATTGGCTACTTTCGGTGTTCATATCTTACATTTTTCTTTATATTTTAATCTGCTATCTCATGCCTTTGTTTTAGCAATCATGAATATCTGGAGCTTAATATCCTTCATAATCTTTTGTCTTGCATTCGGTGGAGAACCTCTGCCATATGAAAGAACCTAATGGTTATGGTTGTGGTGAATCTGCCATCCCACCATTTGTTTATGTAGTTAGATCATTTGTGTATGTAGCATGTAATAGAGCTCTCTGTGTTTTTATGTTCAGTTGCATATTATTTATGTTTTTTTCCGATAATTATTTTCTGGTTCAGAACATAGGATATATTTATTTATTATCCATTGTAAGTACATATTTTTAGCTAGTATTTCACATGTCTTTACGCTCAAATTTTGTAGGTGGAGAAAAACCTTAAACCCTGAAAGGTCAAGAGTGGGGAGATGGTCTCTTGATGAGGATAAACGCCTCATGGTAGCTGTGAAGTTGTTTGGGTCTGGCAGCTGGAATAAGATTGCTCAGTTCATTCCTGGTCGCACACAGAGTCAGTGCAATGAAAGGTAACTTTGTAATTTTAACATTTTAGATTTTACTCCACAGTTTAGTTTTGGATGGTAATCCTAGTTATTTGTGGTTGTTAAACAGGTGGCGCAATGTTCTTGATCCTGATATAGATCTTGGGGAATGGCGACCTGAAGAAGACTCCATACTATTGGCATCAGTCGATGAGTTTGGGCCTTGCTGGTCCAAGATTGCTGGGGCGAAGATTCCTCACCGTACTGACAATATGTGCTTGAGGTAACATTATTTTTAAACTTATATTCATTTTATTATGACAAATTGCATCAATAGTTTCATCCTGAGGAGAAACATACTTGCTAATATTATGCTGTTGTCAACTTCAGAAGATGGAGAAAGTTGTGTCAAGATAAATTGCCTTCAGTTAAGGCAGCTCAACAAATAAAGAAATCCATTCTTCAATGCAACTTTGTTGACAGAGAAACAGAGCGACCTGCCATTGGACCCAGTGACTTAATGCCACTTGTTCGCTCCAAAGTTGATGGAAGTGATGAGAACACTGTGAGGTACAGCTTCTATTGAGTTTCAATTCTCAATCTAATAGTAGAGTGTGTAGCACAAAAATATGATAACTTACTTTTATGTTCTGTTTTTTTATCAATCTCAATTTACCAGTGCTAAAGTCAGGAAGCCCCGAAAACGTTCTAGAATACCATGTGAGGACAATGTACTCCCTGGTGACACATCAAATTCTTCACCTTCTATGAATCTACCTCTTTCTGAATCTATTGATGCTGAGGCTGCTGTAAACACAACCACAGCAAATTCAAAGAAGAAACCATCTAGGTATGATTCATAACATTTAAACTTTACATAGTTTAGTTGTAATGAATATGCATGTTCTGTTTCCTTATCACTAGTTTCTTGTGTGCTTGTTTTACAGAAGTAGATCGAAAAAGCAAACTGATGAAAATCTTGCTGTCTGTGATGTCAACAACTCTTCTAATTGTTCTAGTGGAGCCAGGAAGAGAAAGAGATCTATTACTGACAAAAATCAAGTTGTGCAAAAGAAAATGAAGGGGTCTATCTCTGGTGATAATGAGGCTGTCGTAGAGACAGTGGGCACTATCAGTGCTGATAATGAGGTAGCCACGAAACGGAAGACTGGCTCTACATCTGTTGGTGAAGAAGGCACAACCAAGAAGACAACGAGGGGCTCTCTCTCTGGTAAAGGAGAAGTCAACAAGAGAATGAGGGGCTCTATCTCTGGTGTTCAGAAGGGAGCAACCAAACAAAGAATGAGGGGTTCAGTCTCTACTGATAATCATGGTGCTGTAATGAAAAGCAAGAGAGCACCATCAAGGTAATAATCGTGTTTTGGCATGTCTTTTCCAGATAGAGTTTACGTGAAAACTTTAGAATTATATTTTCCCTTGAGTTTCAATTATACCAGTATCATTATTTTCTCTCGACAGGAAATCAGCCGAAGAGAACTCAAAAGCTGATAGCATGGCTAATGCAGCCTTTGGGTCGGACCTTCCAACTGTGGCTTCTGAAGATAGAGATGCTAATAATGGAAATGTGAAAAATGGGAGACTCAAGTCAATGCCGAGGTATTTTACTCTTCCCTAGTCCAATTTATTTTTGTGTGGGCATGTGAATGTTGAGTTATCGATTAAGGATGGCTGTTAAGGGTCAATTGAGCTTTGAATTAAATTTCTCGAGCTTTTCATTTGCAGACCCAAGCAGATAAACATGACTGAGGGATCTGCAGACAAATTTTCCACATCCACGCGGCTTGCTGATTGCATGTCATTCGGCCGAATCAATGGATCCAGCAGGGTTGCAAGACACTTATGTGTGAGGTAGCAGAACAGCCACCTTTTCTTTTGTCATACTACTAAAACCTAAGTAGTTGACATTTTTTTGATCTGTTTCAGTGTCAAGCCGTTAAGCAACATGATCCAATCAAATGGACCTTCTGATGTGTCAGCTAAGGATCCCACTTCTGCTGAAACAGATCCCACTTCTGTTGAGAATAGCAACACCGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024846

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA024846&oldid=50440"