BGIOSGA024895

From RiceWiki
Revision as of 06:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024895| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024895, complete gene.| tag = OsJ_229...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024895

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024895, complete gene.

LocusTag

OsJ_22948

Ensembl Transcript ID

BGIOSGA024895-TA

Ensembl Protein ID

BGIOSGA024895-PA

Length

2721

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1395666..1398386

Sequence Coding Region

1397664..1398386,1397268..1397576),complement(1396887..1397177,1396666..1396779),complement(1395666..1396289

Genome Context

<gbrowseImage1> name=IndicaChromosome07:1395666..1398386 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:1395666..1398386 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGTGGAGCGGCTTCTGGGCCGCCAGCAGGCCCGCCCTCGCCGCCGCCGCCGCCGGCGGCACGCCGGTCGTCGTCAAGATGGACAATCCCAACTGGTCCATCTCCGAGATCGACGCCGACGGCGGGGAGTTCTTGGCCGGCGGACGGCGGCGAGGCAGGGGCAAGAACGCCAAGCAGATCACCTGGGTGCTGCTGCTCAAGGCGCACCGCGCCGCGGGGTGCCTCGCGTGGCTCGCCTCCGCCGCCGTCGCGCTCGGCGCCGCCGCGCGCCGCCGCGTCGCCGCCGGGCGGACGGACGACGCCGACGCCGAGACGCCGGCGCCGCGGTCCCGGCTCTACGCGTTCATCAGGGCGTCGCTCCTGCTGTCCGTCTTCCTCCTCGCCGTCGAGCTCGCCGCCCACGCCAACGGCCGTGGACGCGTCCTCGCCGCCTCCGTCGACTCGTTCCACTCCTCGTGGGTGCGCTTCCGCGCCGCCTACGTCGCCCCGCCGCTCCAGCTCCTCGCCGACGCCTGCGTCGTGCTCTTCCTCGTCCAGAGCGCCGACCGCCTTGTCCAGTGCCTCGGCTGCCTCTACATCCACCTCAACCGCATCAAGCCTAAACCCATCTCCTCGCCGGCGGCGGCGGCGGCGGCATTGCCCGACCTGGAGGACCCCGACGCCGGCGACTACTACCCCATGGTGCTCGTCCAGATACCAATGTGCAACGAGAAGGAGGTGTATCAGCAATCGATTGCGGCGGTCTGCAATCTTGATTGGCCGAGGTCCAACATCTTGGTGCAAGTGCTAGATGATTCCGATGATCCAATTACGCAGTCATTGATCAAGGAAGAGGTGGAGAAATGGCGGCAGAACGGCGCGCGCATTGTGTACCGCCACCGCGTGCTCCGGGAGGGGTACAAGGCCGGCAACCTCAAGTCGGCGATGAGCTGCAGCTATGTCAAGGACTATGAGTATGTCGCCATCTTCGATGCCGACTTCCAGCCATACCCTGACTTCCTCAAGCGCACCGTGCCGCATTTTAAGGACAATGAGGAGTTGGGGTTGGTTCAGGCTAGATGGTCATTTGTGAACAAGGATGAGAACCTCTTGACGCGGTTGCAGAACATAAACCTGTGCTTCCACTTTGAGGTGGAGCAGCAGGTCAATGGCATATTCATCAACTTCTTTGGGTTCAACGGCACGGCTGGCGTGTGGAGGATCAAGGCGCTGGAGGACTCGGGAGGCTGGATGGAGCGTACTACGGTGGAGGACATGGACATTGCGGTCCGCGCACATCTCAATGGCTGGAAGTTTGTGTTCCTGAATGATGTGGAGTGCCAGTGTGAACTACCAGAGTCTTATGAGGCTTACAGGAAGCAACAGCACCGCTGGCATTCAGGGCCAATGCAGCTGTTCAGGCTATGTTTACCGGACATCATTAGATGCAAGATTGCATTCTGGAAGAAGGCCAATTTGATATTTCTCTTCTTCCTGCTTCGCAAGCTCATCCTGCCCTTCTACTCCTTCACACTTTTCTGCATCATCCTACCAATGACAATGTTTATACCTGAAGCTGAGCTTCCTGACTGGGTTGTCTGCTACATTCCTGCCCTGATGTCCTTCCTTAACATTCTTCCCGCGCCAAAATCATTCCCGTTCATCATCCCGTACCTGCTCTTCGAGAACACCATGTCTGTCACCAAGTTCAATGCAATGATCTCCGGGCTGTTCCAGCTCGGAAGCGCATATGAATGGGTAGTGACCAAGAAATCAGGCCGATCATCGGAGGGTGATCTTATCGCATTGGCACCCAAGGAGCTGAAACAACAGAAGATCCTTGATCTCACAGCAATCAAGGAGCAGTCCATGCTGAAGCAATCCTCTCCAAGAAATGAGGCCAAGAAGAAATACAACCGGATATACAAGAAGGAGCTTGCCCTCTCATTGCTTCTCCTGACCGCCGCGGCTCGCAGCTTGCTTTCGAAACAAGGGATACACTTCTACTTCCTGATGTTTCAGGGATTGTCATTCTTGTTGGTCGGCCTGGACCTCATAGGTGAGGATGTCAAATAA</cdnaseq>

Protein Sequence

<aaseq>MAPWSGFWAASRPALAAAAAGGTPVVVKMDNPNWSISEIDADGGEFLAGGRRRGRGKNAKQITWVLLLKAHRAAGCLAWLASAAVALGAAARRRVAAGRTDDADAETPAPRSRLYAFIRASLLLSVFLLAVELAAHANGRGRVLAASVDSFHSSWVRFRAAYVAPPLQLLADACVVLFLVQSADRLVQCLGCLYIHLNRIKPKPISSPAAAAAALPDLEDPDAGDYYPMVLVQIPMCNEKEVYQQSIAAVCNLDWPRSNILVQVLDDSDDPITQSLIKEEVEKWRQNGARIVYRHRVLREGYKAGNLKSAMSCSYVKDYEYVAIFDADFQPYPDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLNGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRCKIAFWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPDWVVCYIPALMSFLNILPAPKSFPFIIPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLIALAPKELKQQKILDLTAIKEQSMLKQSSPRNEAKKKYNRIYKKELALSLLLLTAAARSLLSKQGIHFYFLMFQGLSFLLVGLDLIGEDVK</aaseq>

Gene Sequence

<dnaseqindica>1..723#811..1119#1210..1500#1608..1721#2098..2721#ATGGCGCCGTGGAGCGGCTTCTGGGCCGCCAGCAGGCCCGCCCTCGCCGCCGCCGCCGCCGGCGGCACGCCGGTCGTCGTCAAGATGGACAATCCCAACTGGTCCATCTCCGAGATCGACGCCGACGGCGGGGAGTTCTTGGCCGGCGGACGGCGGCGAGGCAGGGGCAAGAACGCCAAGCAGATCACCTGGGTGCTGCTGCTCAAGGCGCACCGCGCCGCGGGGTGCCTCGCGTGGCTCGCCTCCGCCGCCGTCGCGCTCGGCGCCGCCGCGCGCCGCCGCGTCGCCGCCGGGCGGACGGACGACGCCGACGCCGAGACGCCGGCGCCGCGGTCCCGGCTCTACGCGTTCATCAGGGCGTCGCTCCTGCTGTCCGTCTTCCTCCTCGCCGTCGAGCTCGCCGCCCACGCCAACGGCCGTGGACGCGTCCTCGCCGCCTCCGTCGACTCGTTCCACTCCTCGTGGGTGCGCTTCCGCGCCGCCTACGTCGCCCCGCCGCTCCAGCTCCTCGCCGACGCCTGCGTCGTGCTCTTCCTCGTCCAGAGCGCCGACCGCCTTGTCCAGTGCCTCGGCTGCCTCTACATCCACCTCAACCGCATCAAGCCTAAACCCATCTCCTCGCCGGCGGCGGCGGCGGCGGCATTGCCCGACCTGGAGGACCCCGACGCCGGCGACTACTACCCCATGGTGCTCGTCCAGATACCAATGTGCAACGAGAAGGAGGTATACATACAAGCACAAACACCTATCACAAATTGCCGCCAAATATCCAATTTCTCACCAAAACATTCCAATTTTGTTCAATTTCAGGTGTATCAGCAATCGATTGCGGCGGTCTGCAATCTTGATTGGCCGAGGTCCAACATCTTGGTGCAAGTGCTAGATGATTCCGATGATCCAATTACGCAGTCATTGATCAAGGAAGAGGTGGAGAAATGGCGGCAGAACGGCGCGCGCATTGTGTACCGCCACCGCGTGCTCCGGGAGGGGTACAAGGCCGGCAACCTCAAGTCGGCGATGAGCTGCAGCTATGTCAAGGACTATGAGTATGTCGCCATCTTCGATGCCGACTTCCAGCCATACCCTGACTTCCTCAAGCGCACCGTGCCGCATTTTAAGGTGAAATTCAGTGGCCGAATCATGTGGAATTGTGTGCATTGTTGATAAGATTCTGAACGTGATCAGTTGCATTTGATGGTTGCAATGCAGGACAATGAGGAGTTGGGGTTGGTTCAGGCTAGATGGTCATTTGTGAACAAGGATGAGAACCTCTTGACGCGGTTGCAGAACATAAACCTGTGCTTCCACTTTGAGGTGGAGCAGCAGGTCAATGGCATATTCATCAACTTCTTTGGGTTCAACGGCACGGCTGGCGTGTGGAGGATCAAGGCGCTGGAGGACTCGGGAGGCTGGATGGAGCGTACTACGGTGGAGGACATGGACATTGCGGTCCGCGCACATCTCAATGGCTGGAAGTTTGTGTTCCTGAATGATGTGGAGGTGAGGAGCACAATGAATTGCATCAAAAAGTTGTATTGCCAAACCATTGGGATCATGTTGCTTGATTACGTATTTTGTGCTAAATTGTTCATTTTGTCTTTGGACAGTGCCAGTGTGAACTACCAGAGTCTTATGAGGCTTACAGGAAGCAACAGCACCGCTGGCATTCAGGGCCAATGCAGCTGTTCAGGCTATGTTTACCGGACATCATTAGATGCAAGGTATTTCCATGTGCTGTATTCGTATTGCATAATTGGTTGCAGTGTCAATGCTTCTTTTAGATAATAATAATAACAGTGTTAGTACTTGTCTGTGATCATACATACGACCAAGCTCACAAATTTGTACTGGTGCATTTATATGTAGCATATGTTAGCATTGTACATTTGAGGTACATACTTATGAGAATAGGTTGCCTTGCGTACGATATGCCGTTTCATGATGGATTCCTTAGTTTATCCGTAAAATTTTGTCAGCTAGATCTAATAATTTTAGAAGATACTACTGCCAGTTGATAGTATTGTCCAATTTCAGATATCCCAAAGTACTACTACCTGTATGTACTTCATTATAATTGTGTTAGCTTTGTTGTTTCAGATTGCATTCTGGAAGAAGGCCAATTTGATATTTCTCTTCTTCCTGCTTCGCAAGCTCATCCTGCCCTTCTACTCCTTCACACTTTTCTGCATCATCCTACCAATGACAATGTTTATACCTGAAGCTGAGCTTCCTGACTGGGTTGTCTGCTACATTCCTGCCCTGATGTCCTTCCTTAACATTCTTCCCGCGCCAAAATCATTCCCGTTCATCATCCCGTACCTGCTCTTCGAGAACACCATGTCTGTCACCAAGTTCAATGCAATGATCTCCGGGCTGTTCCAGCTCGGAAGCGCATATGAATGGGTAGTGACCAAGAAATCAGGCCGATCATCGGAGGGTGATCTTATCGCATTGGCACCCAAGGAGCTGAAACAACAGAAGATCCTTGATCTCACAGCAATCAAGGAGCAGTCCATGCTGAAGCAATCCTCTCCAAGAAATGAGGCCAAGAAGAAATACAACCGGATATACAAGAAGGAGCTTGCCCTCTCATTGCTTCTCCTGACCGCCGCGGCTCGCAGCTTGCTTTCGAAACAAGGGATACACTTCTACTTCCTGATGTTTCAGGGATTGTCATTCTTGTTGGTCGGCCTGGACCTCATAGGTGAGGATGTCAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024895