BGIOSGA024918

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Revision as of 06:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024918| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024918, complete gene.| tag = OS07G01...")
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Gene Name

BGIOSGA024918

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024918, complete gene.

LocusTag

OS07G0117800

Ensembl Transcript ID

BGIOSGA024918-TA

Ensembl Protein ID

BGIOSGA024918-PA

Length

5855

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1042717..1048571

Sequence Coding Region

1047056..1048571,1045302..1045499),complement(1043217..1044545,1042717..1042742

Genome Context

<gbrowseImage1> name=IndicaChromosome07:1042717..1048571 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:1042717..1048571 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAAAGAAAAATTGGTTTCATTCCCAGAATGAATACTCTCTTGTCTGCAATCCTAGGAGAGCTTGCAGGTAGATCCTTCTCCTTCTTGATAGACAGATGCTACTCCAAACTGCCATTGCTGTCCAACGAGGAGAAGATTCAGAGACTCGAAAGGATGCTGCACCGGCTCGCTGCTGCCATCGAAGAGGCCGATGGGAGGAGAATCTTGAACCATGGAATGCTTCGACATATCAACATTCTGAGACAAGACATGTACAGAGGGTACTACATTCTTGACTCCTTCAGATTCCCTGAAGCCCACGAGGAGGAGATCATGAGCGAAAACAATGACAAAGTGAGTTACTCTTTAGCTCTGTCTAAATTCAACTCTGCCAAGCGTGCTCGAATCCCTATTGGTACTAGACGGCATGGAGATAGAGGAGAGCTTGAGCAGGTTATTGACAACCTAGAGATCGCCATGGCTGACATGGTTGAGTTTTTTCTGCTTTTGAACAACTACCCTTCCATTCATCGTCAGCCATACAACAGTTACCTGTTCATGGACAAGTGCATGTTTGGGCGTCAAATGGAGATGGAGCATATCATCAATTTCTTGTTGCGTCCTGAACCTCCAAACACGCTAAGTGTTGATAACCTTGGTGTCCTGCCGATCATTGGTCCAGCCAAAGTTGGGAAGAGCACACTTGTCAAGCATGTTTGCGGCGATGAGAGGGTGTGCAACCACTTCTCTCGCATCCTTTTTCTTACTGAGGGCGATTTTAGAGAGGAAAAATCATTGCTTACACTAAGGGATTCAGGAGAGATAAGGCATATGCACACATCATCATCGGTTTCAAGTGGAGGAGAAAGATTGTTAGTCATCATTGAGTTAGCTGAGGATGTTGCTGATGATAAATGGACAATGATGTGCGCTTCTTTGCGAAGTTGCATTTCAGCTGGAAGTAAAATCATAATCACAAGCCGGTTAGAGAAGATCGCAAAGCTTGGAACAACACAACCTCTACGTCTGAAGTTTTTGTCGCGAGAAGCTTACTGGTACTTCTTTAAGGTGCTCGCATTCGGAAGCTCAGATCCTAAAGAACACCCTGAGTTAGCATCTGTATCAATGATGATGTTCAATGTCTACTTTGATCATGAATTGTACAAGAATTTCACTGGACCATTCATGGACCTAAATATCATGGCCAGCTTGATCCAAGCTACATTTTATGAGGGCAACTGGCTCAGCCTCCATGCACACACCAGGAGTTATTTTCTGCTTAGGAGAGGTTTAGGTGATGATTTTGAGTTGAAGACGAAGTGCGTGCCTATTCCCAAGAAAAATACAGTTGTGCAACAGTATTGTGTAATTTCCGACTATTGCCGAGTAGGGGTTGCTCATGAAGAAGATCAGAAGGTTCCCAAAATTGACATGCAAGATGTCTTGTCAGGGAGAGTTGCACCTGATGGGAGATTTGATGTTGTGCTATGGAGATCTCACCTGCCGCCATATTACAGCTACATATATAGCTTGATCGACGTCGTCCGCCACGAAGGGAGAAGGAAGCGAGCATCGCCGGTGGTGGTGCAGCAAAGGAAGTCGACATTGATACAGTGGTGGTGCCGGCCTGATCTGGAGACATCAGTGGCAACGGTGGCTCGGGTACTTCCGACAATTGGCAGCATGGATGGTGATGCCTCCTCTCCTCCCATGTCTGCTCTTGATCCAGTTTTGAGTGATCTTGCCACTAGATCTATATCTTTCCTGATCAACAAGTGCATGAAACAGACAGAGTCAGCCATGGAGGAGAGACTACGGTGGCTGCTGCTCCGGGTTCGGATCATCGTGGAGGAGGCAGATGAACGGATCATCACAAACCAAGTCATGCTGCAACAACTGAACATACTAAGGAAGGAGATGTACAGAGGGTATTTCACCCTCGACATATTCAGATGCCATGGATACAAAGGTGACAATACTAAAGATCACCAGGTGAGTAACTCTTTCGCACTATCCAAGTTCAATCCTGCCAAGCGTGTTCGGCTGAGCAGGGTCAGTGGCCACAGTGTACAAAAGCAGTTGCAGCAAGTTCTTGGCAGCCTTGAAGTTGCCATTGAAGATACAAGTGAATTTGTCATGTTCTTGAACAATTGTCCACGTCTATGCCGCCAGCCATATAGCATGCACTTGCTTTTAGACAATTGCTTGTTCAGTCGCCAATTGGAGAGGGAGCACATCATGAACTTCCTGCTCAAAGAGAATACTCCCGGAGCTGAAAATCTAGGCATCCTGCCGATCATCGGTCCAGAGAACGTTGGGAAGAGCACCCTGATTGAGCATGCCTGTGATGATGAAAGGGTGCGTAACCACTTCTCTCAAATTGTGTGTTTCAATGACAATGATCTTGAAGATGCAAACATGGTGACTCTTAGAAATCGTGGTGAAATCAAGCATCAAAACCATGCCACTGATGGAGAAAGGATACTAATAATTATTGAACTAATCAGAGACATCGATGAGGGCGCGTGGAGAAGATTGTACTCAGCTTACAAAAATTGTGTTGCAAACGGCAGTAAAATTATAGTCGCGAGCCGATCTGATAAGATAGCGAACTTTGGAACGACAAAGGCTCTTAGAGTGACCTTACTTACTCAAGAAGCTTATTGGTACTTTTTCAAGTTGCGCACATTTGGAAGCACAGATGCAGCGGAGCACCCAAAGATGGCATCCATAGCAATGGATATAGCCATTGAATTGAATGGGTGCTTCATGGGTTCAAGTATCTACACTCTACTTTTGAGAGCAAATTTCAACGCTCAGTATTGGAGCATGGCTCTTGCAATAATCAGAAAATTCAGAAAGCTGAATCTCTTACTCTATGGTGCATGTTTTTTTGATGGTCCTTGGCAGAGGGTTGAACCGGCATATGTTAGGAGGGTAAACAAAATTTGTCCTGAGTATCTTGTGCTTCTTGATGACTATAAAATATGTTCTGGTCAAAACAACATAGTTCATTGTCACACAAACTGTGCTGACAATGAAGATGAAGTTCCCAATGCTTGCAACATACGGAAAGCATCCTAA</cdnaseq>

Protein Sequence

<aaseq>MGKRKIGFIPRMNTLLSAILGELAGRSFSFLIDRCYSKLPLLSNEEKIQRLERMLHRLAAAIEEADGRRILNHGMLRHINILRQDMYRGYYILDSFRFPEAHEEEIMSENNDKVSYSLALSKFNSAKRARIPIGTRRHGDRGELEQVIDNLEIAMADMVEFFLLLNNYPSIHRQPYNSYLFMDKCMFGRQMEMEHIINFLLRPEPPNTLSVDNLGVLPIIGPAKVGKSTLVKHVCGDERVCNHFSRILFLTEGDFREEKSLLTLRDSGEIRHMHTSSSVSSGGERLLVIIELAEDVADDKWTMMCASLRSCISAGSKIIITSRLEKIAKLGTTQPLRLKFLSREAYWYFFKVLAFGSSDPKEHPELASVSMMMFNVYFDHELYKNFTGPFMDLNIMASLIQATFYEGNWLSLHAHTRSYFLLRRGLGDDFELKTKCVPIPKKNTVVQQYCVISDYCRVGVAHEEDQKVPKIDMQDVLSGRVAPDGRFDVVLWRSHLPPYYSYIYSLIDVVRHEGRRKRASPVVVQQRKSTLIQWWCRPDLETSVATVARVLPTIGSMDGDASSPPMSALDPVLSDLATRSISFLINKCMKQTESAMEERLRWLLLRVRIIVEEADERIITNQVMLQQLNILRKEMYRGYFTLDIFRCHGYKGDNTKDHQVSNSFALSKFNPAKRVRLSRVSGHSVQKQLQQVLGSLEVAIEDTSEFVMFLNNCPRLCRQPYSMHLLLDNCLFSRQLEREHIMNFLLKENTPGAENLGILPIIGPENVGKSTLIEHACDDERVRNHFSQIVCFNDNDLEDANMVTLRNRGEIKHQNHATDGERILIIIELIRDIDEGAWRRLYSAYKNCVANGSKIIVASRSDKIANFGTTKALRVTLLTQEAYWYFFKLRTFGSTDAAEHPKMASIAMDIAIELNGCFMGSSIYTLLLRANFNAQYWSMALAIIRKFRKLNLLLYGACFFDGPWQRVEPAYVRRVNKICPEYLVLLDDYKICSGQNNIVHCHTNCADNEDEVPNACNIRKAS</aaseq>

Gene Sequence

<dnaseqindica>1..1516#3073..3270#4027..5355#5830..5855#ATGGGGAAAAGAAAAATTGGTTTCATTCCCAGAATGAATACTCTCTTGTCTGCAATCCTAGGAGAGCTTGCAGGTAGATCCTTCTCCTTCTTGATAGACAGATGCTACTCCAAACTGCCATTGCTGTCCAACGAGGAGAAGATTCAGAGACTCGAAAGGATGCTGCACCGGCTCGCTGCTGCCATCGAAGAGGCCGATGGGAGGAGAATCTTGAACCATGGAATGCTTCGACATATCAACATTCTGAGACAAGACATGTACAGAGGGTACTACATTCTTGACTCCTTCAGATTCCCTGAAGCCCACGAGGAGGAGATCATGAGCGAAAACAATGACAAAGTGAGTTACTCTTTAGCTCTGTCTAAATTCAACTCTGCCAAGCGTGCTCGAATCCCTATTGGTACTAGACGGCATGGAGATAGAGGAGAGCTTGAGCAGGTTATTGACAACCTAGAGATCGCCATGGCTGACATGGTTGAGTTTTTTCTGCTTTTGAACAACTACCCTTCCATTCATCGTCAGCCATACAACAGTTACCTGTTCATGGACAAGTGCATGTTTGGGCGTCAAATGGAGATGGAGCATATCATCAATTTCTTGTTGCGTCCTGAACCTCCAAACACGCTAAGTGTTGATAACCTTGGTGTCCTGCCGATCATTGGTCCAGCCAAAGTTGGGAAGAGCACACTTGTCAAGCATGTTTGCGGCGATGAGAGGGTGTGCAACCACTTCTCTCGCATCCTTTTTCTTACTGAGGGCGATTTTAGAGAGGAAAAATCATTGCTTACACTAAGGGATTCAGGAGAGATAAGGCATATGCACACATCATCATCGGTTTCAAGTGGAGGAGAAAGATTGTTAGTCATCATTGAGTTAGCTGAGGATGTTGCTGATGATAAATGGACAATGATGTGCGCTTCTTTGCGAAGTTGCATTTCAGCTGGAAGTAAAATCATAATCACAAGCCGGTTAGAGAAGATCGCAAAGCTTGGAACAACACAACCTCTACGTCTGAAGTTTTTGTCGCGAGAAGCTTACTGGTACTTCTTTAAGGTGCTCGCATTCGGAAGCTCAGATCCTAAAGAACACCCTGAGTTAGCATCTGTATCAATGATGATGTTCAATGTCTACTTTGATCATGAATTGTACAAGAATTTCACTGGACCATTCATGGACCTAAATATCATGGCCAGCTTGATCCAAGCTACATTTTATGAGGGCAACTGGCTCAGCCTCCATGCACACACCAGGAGTTATTTTCTGCTTAGGAGAGGTTTAGGTGATGATTTTGAGTTGAAGACGAAGTGCGTGCCTATTCCCAAGAAAAATACAGTTGTGCAACAGTATTGTGTAATTTCCGACTATTGCCGAGTAGGGGTTGCTCATGAAGAAGATCAGAAGGTTCCCAAAATTGACATGCAAGATGTCTTGTCAGGGAGAGTTGCACCTGATGGGAGATTTGATGTTGTGCTATGGAGATCTCACCTGCCGCCATATTACAGCTACATATATAGCTGTGAGATCCATGAGTACAGGCCTGTATTAGCTACCTGCAAGATGGAACTCCGGCAAAAGAGGAAAAAAATTAGATTGAACTAGATGGTTTTCCATATGTATAAATGATAAAGAGTCTGTCCTATTTTATCACTGAATTCAGCTGTATGATTAACACTAGATTCATCTTTTTATGCTGTCTCTTGTAAACTTATCCTACAAGCTCTATTAGTTGCTGTCTTATTGTTTCCTCATGTGAATCTGTCCTTGATACGCAGGTCTGTTGAATGGAACAGGATCAGCCGCAGTTGTAGTTTTGACTGCAACTTTTAACTTCAGCAGTCACCATGATCCAATCATTCAATACTCAACCAAGATCAAGAGGCTATTTCTTTTTTCATTCCTTTGATTAGTTTGCAGGTTAAGTAGGCGATATGTATGAAAACATTTATACATGGGGTAAGGATAATTACTTAATTACCTAGTTATGCTCGTTTGTGTCAAATTGGATTTTAGATTCTAGTTCAGAGAAAAACTAGCCTCTACTAATTTCATGCTGAAAGAGTGCCCTACTTATATCAAATTATATTTATATGAGTGGGGGAGCCCCTCACCTCATAGGCTAGTTTTTGGGGTGGAAAAGACCCTTTATGATCCTACATTAAACAACAGTCAAATAGTTTTTTTATATAGAGTCTTATATGAATGAATTTTCAAAATTGTAATTACTAAATAATTAACTTGGAAGTTCAGAATGAATTGATTTAAGTGTGGTAAATAACTATAATAAATACTACTCCAGTATTCAAGAAAGGCGAGAGGAGAGATGGGCTGTTGATCTAGAGCCATTGGTTACATGTTGGGTGGTTGGATGTAGGGACTGCTAAAGTTGCAGTCACAACTGCAACTGCAGTCGATCCTGGTGAACAGATGCTCACTGCTCATTTCCGATGCACATAATCTCTCATATTTTTTGAGTGAACAATCTCTCATATTCAACTCTTGAGAAAAAAATATCCACGAATTGAGTTGTTACACATTTTTAAGTCCATACATCTGTTTACATATGAAATGTTTTTATTTGTGCGATTGACTACATCAAAAGTCCATTATTCTTTTTCACACATTGCATCCCGAAATTCAAATAACTACAACTAGATCATATAAATTAAAACTAATAATCATCCCATGTATTCTTTTCTCTTCTTAGCATTCCTCTTATTTCATCTCCTATATCTTCTCACATAATTTCTCAACTTCTGTAACAATATGGGTCACACACCTTCTCTATGATATGATTTTGGCTCGGCATCCATCAATAGTATATATGGGGCTAATTATCAAAGGTAAATGTTTCAGCGATAAATCAAACCATATCCTAACTACAGGCAAATAATTTTTTTTATATTTTCAGATAATGGGATCTATACTGTCCATTATCCAAAAAAAATGTTATTTTCTTTCTTTCCTTCATTCTGAGTTTATGACTAACTTACCAAAGGCTGCCGAAATTAAAGCTTCAATTTTGGATGTACCTGTGGTGATACTACTGTGCCTCCAAGCTCCCTGATTTGGCAGTGATCGACGTCGTCCGCCACGAAGGGAGAAGGAAGCGAGCATCGCCGGTGGTGGTGCAGCAAAGGAAGTCGACATTGATACAGTGGTGGTGCCGGCCTGATCTGGAGACATCAGTGGCAACGGTGGCTCGGGTACTTCCGACAATTGGCAGCATGGATGGTGATGCCTCCTCTCCTCCCATGTCTGCTCTTGATCCAGGTACTTAATTTTCAAGGATCTGTAGCCTATTCTGAATATTTTATTTCCCAGAGAAGTATATTACAAAAAGAAATTTCAGAGATGTGGCTAGCTAGTCAGCTGCCGTACAAGTGGTTAATCATAATTCTATTGTCCAGGAAACGTAGCTATTCAGCTGTTTAAGGAGATAACAACCATGGTATGAAAACAATTTATGAATTTTTCCTCTCTGTTCATGTCGTTTTCTTTAGTCTTTCAGGTCAGACAAGTAGAAGTCAAAACTTAACTCTAAATTAACAAAGAGCAAAGAGTTGAATTTGGCCCTGCAAAAAAAAGAAGGCTTGAATTTTGTATTGAGGCCTTGGAGGCATTGTCCTTAGCAATGATACATTTTATTGATATGGACTGGTCCACAAAATCTGTCTATGGTGCATCGTGAAGTCTATGGACTGGTCAACAAAAAATACACGTGGTTGTGAAGTCTATGGTGCTAAACAAAATCTGTAGAATTCCCTTTACTGCTTTCATTGTCTCTGCTATGTGGTCAGACTTGTTATGCTAAAGCAGACTGCAGAGAAAAATATAGAAACTTGAATTTTAAGGAGATGTGGAGTTTCTGGAGTATGTGGCTGCCCTAATTCTCACTCTGTTTTATCATATCCTCTAAAAGTTCTGTGATTACATAGTTTCTCTCTGGTCTCAGTCCTTGTCGACCTGTTGAGTGATTTACAAAATTTCAGATTACATAGTTACATATGGAGACATTTTTGTCTGCAGTTTTGAGTGATCTTGCCACTAGATCTATATCTTTCCTGATCAACAAGTGCATGAAACAGACAGAGTCAGCCATGGAGGAGAGACTACGGTGGCTGCTGCTCCGGGTTCGGATCATCGTGGAGGAGGCAGATGAACGGATCATCACAAACCAAGTCATGCTGCAACAACTGAACATACTAAGGAAGGAGATGTACAGAGGGTATTTCACCCTCGACATATTCAGATGCCATGGATACAAAGGTGACAATACTAAAGATCACCAGGTGAGTAACTCTTTCGCACTATCCAAGTTCAATCCTGCCAAGCGTGTTCGGCTGAGCAGGGTCAGTGGCCACAGTGTACAAAAGCAGTTGCAGCAAGTTCTTGGCAGCCTTGAAGTTGCCATTGAAGATACAAGTGAATTTGTCATGTTCTTGAACAATTGTCCACGTCTATGCCGCCAGCCATATAGCATGCACTTGCTTTTAGACAATTGCTTGTTCAGTCGCCAATTGGAGAGGGAGCACATCATGAACTTCCTGCTCAAAGAGAATACTCCCGGAGCTGAAAATCTAGGCATCCTGCCGATCATCGGTCCAGAGAACGTTGGGAAGAGCACCCTGATTGAGCATGCCTGTGATGATGAAAGGGTGCGTAACCACTTCTCTCAAATTGTGTGTTTCAATGACAATGATCTTGAAGATGCAAACATGGTGACTCTTAGAAATCGTGGTGAAATCAAGCATCAAAACCATGCCACTGATGGAGAAAGGATACTAATAATTATTGAACTAATCAGAGACATCGATGAGGGCGCGTGGAGAAGATTGTACTCAGCTTACAAAAATTGTGTTGCAAACGGCAGTAAAATTATAGTCGCGAGCCGATCTGATAAGATAGCGAACTTTGGAACGACAAAGGCTCTTAGAGTGACCTTACTTACTCAAGAAGCTTATTGGTACTTTTTCAAGTTGCGCACATTTGGAAGCACAGATGCAGCGGAGCACCCAAAGATGGCATCCATAGCAATGGATATAGCCATTGAATTGAATGGGTGCTTCATGGGTTCAAGTATCTACACTCTACTTTTGAGAGCAAATTTCAACGCTCAGTATTGGAGCATGGCTCTTGCAATAATCAGAAAATTCAGAAAGCTGAATCTCTTACTCTATGGTGCATGTTTTTTTGATGGTCCTTGGCAGAGGGTTGAACCGGCATATGTTAGGAGGGTAAACAAAATTTGTCCTGAGTATCTTGTGCTTCTTGATGACTATAAAATATGTTCTGGTCAAAACAACATAGTTCATTGTCACACAAACTGTGCTGACAATGAAGATGAAGTTCCCAATGGTTAGTTTGCACGATTTTCTCTTCGGAAGGGTACCTCGAGGTAAATTTAAGGTTCTAGCTTTTAGATCCCACCTTCCACCTCACAACAACTATATGCTCCATTGTAAGGTACAGAGGTCATATCATATGGTCACCAGAAACAAGAGATCTATGAAGTTTTTACATGACCATCTTAGGAGCTGATGTATAATGTAATTATGTCGAACTGTAATCTGAATCTGAGCATTTGTTGAAATGCTTTCACCTACTGTCTGAGCGGCTGCGCCATTTGTAGTCCAAGCTCATGTGTATGTGCTATTTTAAGAGGTTGTTGAACTCAAGTCGTCAGAATCTATTAACATTCTGTATTTGAAGTTTGATCATGTCACCATGCGTGAGGCACAAAGACACTTGTCCAGAAGTCAATGATAATTGACAGCAACTAATATATTGATCCTGTGTTTACTGTTTCTGAACATTCATTGCTTGTTGCAGCTTGCAACATACGGAAAGCATCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024918