Os12g0132200

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Revision as of 10:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0132200| Description = Similar to Serine/threonine kinase| Version = NM_001072611.1 GI:115487183 GeneID:4351419| Length = 5405 bp| Definit...")
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Gene Name

Os12g0132200

Description

Similar to Serine/threonine kinase

Version

NM_001072611.1 GI:115487183 GeneID:4351419

Length

5405 bp

Definition

Oryza sativa Japonica Group Os12g0132200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1553891..1559295

Sequence Coding Region

1555278..1555448,1555710..1555772,1556236..1556307,1556430..1556537,1556644..1556724
,1556861..1556914,1557020..1557145,1557228..1557317,1557603..1557725
,1557831..1557938,1558287..1558400,1558530..1558586,1558667..1558741
,1558915..1558989

Expression

GEO Profiles:Os12g0132200

Genome Context

<gbrowseImage1> name=NC_008405:1553891..1559295 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1553891..1559295 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtacaaccaaagtgaagagacgtgtgggaaagtatgagctaggaagaacaatcggagagggcacattcgcgaaggtcaagttcgcgagggataccgagaccggtgatccagtagccatcaagatcctagataaggagaaagttctcaagcataagatggtcgaacagattaaaagggaaatttcgacaatgaagttgattaagcacccaaatgttgtccgtatatatgaggtgatgggaagcaagacaaaaatctacattgttttagaatatgttaccggtggtgagctctttgatacaattgttaaccatggtcgtatgagggaagatgaggcaagaaggtacttccaacaattaattaatgctgttgattattgtcatagcaggggtgtgtaccacagggacttaaaaccagaaaatttactactagattcatatgggaatctgaaggtctctgattttgggctgagtgcactttctcagcaaattaaggatgatggtttgctgcacacaacctgcgggacaccaaattatgttgcaccggaggtccttgaagatcaaggatatgatggagcaatggcagatttgtggtcatgtggagttatcctgttcgttctgctagcagggtatttgccttttgaggactctaatcttatgacgttgtataagaaaatatcaaatgcagagtttacgtttccaccttggacgtcttttcctgccaagaggttgttaacaagaatccttgatccaaacccaatgacgagagtaacaattccagaaatattagaggatgagtggttcaaaaagggctacaaacgcccagagtttgacgaaaaatatgacacaacattggatgatgtttatgctgtcttcaatgactctgaagagcaccatgtgacagaaaagaaagaagaaccagaagctctcaatgcatttgaactgatttcaatgtcagcaggcctcaatcttgggaatttgtttgattcagagcaggaattcaaaagagaaacaaggttcacatcaaaatgtccaccaaaagaaattgtccgcaagattgaggaagccgcaaaacctctaggatttgatgttcagaagaaaaattacaagttaaggttggaaaaggtaaaagcagggagaaaaggaaatctcaatgttgctactgagatactgcaggttgcaccctctcttcatatggttgaagtacgaaaagcaaaaggcgacaccctcgaatttcataagttctacaagaacctctccagaaccttaaaggatgttgtttggaaatcagatgatcttcaaaatcaactttcctag</cdnaseq>

Protein Sequence

<aaseq>MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKIL DKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTI VNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNLKVSDFGLSAL SQQIKDDGLLHTTCGTPNYVAPEVLEDQGYDGAMADLWSCGVILFVLLAGYLPFEDSN LMTLYKKISNAEFTFPPWTSFPAKRLLTRILDPNPMTRVTIPEILEDEWFKKGYKRPE FDEKYDTTLDDVYAVFNDSEEHHVTEKKEEPEALNAFELISMSAGLNLGNLFDSEQEF KRETRFTSKCPPKEIVRKIEEAAKPLGFDVQKKNYKLRLEKVKAGRKGNLNVATEILQ VAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDDLQNQLS</aaseq>

Gene Sequence

<dnaseqindica>1388..1558#1820..1882#2346..2417#2540..2647#2754..2834#2971..3024#3130..3255#3338..3427#3713..3835#3941..4048#4397..4510#4640..4696#4777..4851#5025..5099#attccaactcactctcgtctcctcttcttcttcttcaacctctcctttcatacatgctgttgctgccaccactactgctcttcctcgcctcttcctgatctcagcagccatttccctttcctgggatctcctcctcttctactactcttcttccatcgccataagagcagccgcagatcgatcgaattgcattgcagtcttttgcagatttcagcttaattgccggtgagtcgttctgatgcctcttctcttcttgatttctccaacctactaaattgctttcatcccctctctagctatctctgcaactttctttgcattgtgtgcgttgtttccttttcaatctctgtagatgttgtttggtgctgtgtgctgagagaataaggttgctgaatttagcttgtcgtttctgtatccattggagattttctcggctttcttgaaattttctgtccccgtttactcctgtgggttcatcactgctaactacaagctgctgggatgtgattatttctaccctaccagtaatcctatggaaactgcttccagggttactttggtggagtacttcagttcctgacgactgagaatatctgaatatgtgttcattctcgaaccttcttcgtcttgctgctcctcgatccatacataaaaaaagttcctgcctttcctgtttgagagttctatccgcttaatgatcttgatttgtgttatttcaaaaagaaatattcttgatttgtactgtttctggaaatatgccctgccctcttaacctttgatgaatattcaatagcttctttgcagcttcctcgtgtctcattgactaaatatgctgtccagatccaaatgatgctctctttcctttttctactgcaaattgatcggtcaagttttcggaaaaataaattaatggattcacatgatcttctaacttactaccaattaatttaattgactagtccacaaatcttatggtatcttacacactataaaatcttggagaactgattgctcaacagctttgcatgtgtgtctctgtagcagaagatactattatatgttttcaaagactaaaatttgactagtgcatatatcattttggggaagaaataagatgagaaatacagcatgtacatgtcattgtgctcctgtacctacaagtttgtcaacaggcttccgatctttttcagctaataatgaataggctccggatgaaatttgttcacacaatcgcacatacacaaaacatctttatcatgtatcatctattcatctttttccatgtatcaacagtaactgagcaaacgttttccacaggacagtgaagtgaaagcatcttcaagggcgtggaagctctctgagattccaaagggtcacaaggcaggggatgagtacaaccaaagtgaagagacgtgtgggaaagtatgagctaggaagaacaatcggagagggcacattcgcgaaggtcaagttcgcgagggataccgagaccggtgatccagtagccatcaagatcctagataaggagaaagttctcaagcataagatggtcgaacaggtcactgtcaaacaccagctaacgaccaagttctgaatctgaattattgtagcacctttaattgtttggtgatatttcacatctggaatattatgatcctgtccttcagatttccctttatttaagtgactgtccttccgattctttttgcctgttaattactttcatgggacaaaaaacatggcactttgttcagggtttagtagcttttgatggaagtaataccttttgctgatgggtaactctgtttttggaatgcagattaaaagggaaatttcgacaatgaagttgattaagcacccaaatgttgtccgtatatatgaggtaattaaaaatattctcttccttttgtgttggtatctcagttaatcctatatttgttcagcagaaaatagctaggaagagagaaaggtttttaaagcatgtctagggtccatgccagaacatcaaagtatctataggccccatcgtttggcttttttcctaataagccaaaacggcttattaggaaataaaaatgaatttgtaggtaaaacttttatatatgtgttcttggtaacttaaaagccaatgctaaaaaacaaactacgttgaaaatatttcaaaatcaatctcaaaattaagtttaaaaatttaaattttggctttttctttggctgattaggccatccgatgggagccatcattaatcataattttgtttacagaaattccagatgcaattagtcagaatctttttattaggggacactgctaatcgtcaaatcaatgttctctctgatttcaggtgatgggaagcaagacaaaaatctacattgttttagaatatgttaccggtggtgagctctttgatacaattgtaagtgattctgctatgttgtccatttccaatttaaatagttatatcttcttttcaaaacacatataaaaatacatttttaatttgtaatgacatttacttgaattcccttttgtatttaggttaaccatggtcgtatgagggaagatgaggcaagaaggtacttccaacaattaattaatgctgttgattattgtcatagcaggggtgtgtaccacagggacttaaaagtgagttcatctccctttcctctgctgcctcttttgtcaacaagaaatatatttcagaatctaagcttccttccaaaagaaacaatctaaattacaatacttgcagccagaaaatttactactagattcatatgggaatctgaaggtctctgattttgggctgagtgcactttctcagcaaattaaggtaaaggtttattgctttatactgtatcatctaagtatgtaccaacaggctacaaatattacagttcagaaattattagataatcgttatatgtctcttcaattaatatttcttttttctttgtggccttgttcaggatgatggtttgctgcacacaacctgcgggacaccaaattatgttgcaccggaggtaatgtcagaaagagaaattatagaattttaacctaccatacttggaactatttttcatcagaagccattaataattcacacatttcatccacctttgtgataggtccttgaagatcaaggatatgatggagcaatggcagatttgtggtcatgtggagttatcctgttcgttctgctagcagggtatttgccttttgaggactctaatcttatgacgttgtataagaaagtgagaattgtaccacttttagatcatttttgttgtattaatatttcatgcttatttgattcttctctgcacttcctggcagatatcaaatgcagagtttacgtttccaccttggacgtcttttcctgccaagaggttgttaacaagaatccttgatccaaacccaatgacggtatgctagaacaactgaataacatagtagataattaggtataatgcatcactgaaggcactgtaatgtgtcttctaataacacagtagatcctgtaatgcctgtagcattcatcaaccagataatactcaattctacaggggctagcactccttttagaaagctcttctatgcttaataataatcattaaaacagatagtaataactaataaaataatatcatctttcttcgtgacacaacattggatgatttcttaagctaactacttgagctactgttgtagagagtaacaattccagaaatattagaggatgagtggttcaaaaagggctacaaacgcccagagtttgacgaaaaatatgacacaacattggatgatgtttatgctgtcttcaatgactctgaagtgagtaaactgcaatatgcacttgaatttctgtttcacatgacatgaagataaaagcatgccagttgctaaatggtttgaccactgtgatttgacctcctccaggagcaccatgtgacagaaaagaaagaagaaccagaagctctcaatgcatttgaactgatttcaatgtcagcaggcctcaatcttgggaatttgtttgattcagagcaggtacgtgatctccctatttaatcaatattgaccaacaaccttttgaacctattctccctgtattatttttatgaacgaacctgtaacttaaagttaagcgtcattgtttttggttcaacttatacctccctaaatcaagctggaaacatgtaaactggctcactggcactttgtcaatttactcaatcatatggttggagaatgctgcatgtcacaagtcccagaatatatgtagtagttcattggtcagaatgtcttttgatttttgcacctcataattctgccataactttgttatagttttgcaacttattctgctgtactttaattttgttcacactatttcaggaattcaaaagagaaacaaggttcacatcaaaatgtccaccaaaagaaattgtccgcaagattgaggaagccgcaaaacctctaggatttgatgttcagaagaaaaattacaaggtatgctccccttgcctaacaactatctgcatgaatatccgttttaaagtaatgggttctagggacaatttatagcaaattcaaatatatattttctacgtgctgaatttttttttattgattgaccagttaaggttggaaaaggtaaaagcagggagaaaaggaaatctcaatgttgctactgaggtaatatgaagaactgctatactgcaatctggtttgtgtaagcttcttcaatctaacatttattgtgcactattattcagatactgcaggttgcaccctctcttcatatggttgaagtacgaaaagcaaaaggcgacaccctcgaatttcataaggtagatcatgccaattaaaagttgatgctcatgaattatcattggaaaattgagtcagtgctttgatgattggatcaactactcacagaattatgactatgttttttttttcttttgcaacatttggttgaatggcttgtactgaatcacttcaaacttgtaatgtgttgcagttctacaagaacctctccagaaccttaaaggatgttgtttggaaatcagatgatcttcaaaatcaactttcctagagtaacttgggagaggaggaatgggtgaactattttagcatcccattcttttgaatcagcattcccatttctagaggctggaaaagcagaaagcatgttcattgcatctgtaattagatgtgagtggccctgtaaactatgtttggtctccactagtgttgtaaatgctgctcttatttgtcagagaacccttgtgatagctcaagtgaagctgatcactcaatgggttttgtgtgtcaagttttgtatgtaaatcagaatcttgtgaggaacaagtatattaattggccagcattattcattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0132200, RefSeq:Os12g0132200