Os12g0132800

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Revision as of 10:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0132800| Description = Major facilitator superfamily antiporter| Version = NM_001072616.1 GI:115487193 GeneID:4351424| Length = 4936 bp| D...")
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Gene Name

Os12g0132800

Description

Major facilitator superfamily antiporter

Version

NM_001072616.1 GI:115487193 GeneID:4351424

Length

4936 bp

Definition

Oryza sativa Japonica Group Os12g0132800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1583175..1588110

Sequence Coding Region

1583401..1583498,1583879..1583922,1584285..1584373,1584492..1584536,1584911..1585018
,1585158..1585243,1585385..1585472,1585970..1586140,1586379..1586454
,1586534..1586583,1586692..1586754,1586839..1586892,1587038..1587140
,1587265..1587367,1587479..1587539,1587629..1587669,1587801..1587933

Expression

GEO Profiles:Os12g0132800

Genome Context

<gbrowseImage1> name=NC_008405:1583175..1588110 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1583175..1588110 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgagccgccggcgaccaaggtgtaccacgatggctgccccggctgcgccatggagcagaggaaggaggagcacaagggcattccctacagggagttcctcttcgttgccatcaccaccctcgcctcctctctgccaatctcttccttgttccccttcctgtacttcatgataagagacttgcatgttgctcggacagaggaagatattggattctatgctggatttcttggcgcatcatatatgatcggtcgtggtttcgcatcgatcttgtggggtatggtggcagatcgtattggccgtaagcctgtcattatcttttccatttttgcagtcattgtgctcaatactttgtttggattaagtgtgaagtactggatggctgttaccacaagatttcttcttggtgctctgaatggattgcttgcaccaataaaggcgtactctatcgaagtttgccgagctgaacatcaacctttgggcctatcaattgtgagcacagcatgggggataggtcttgtagttggcccagcaactgggggatacctcgcacagcctgtcaaacaatatcctcatatttttcatgagaagtcaatatttgggagatttccatatcttctaccctgcctttgtatatcactttttgctctcttggtcctcctaagctgtatatggctaccggagaccctacataagcataaaggccttgaagtgggagtggagacagctgaagcttctactactcaagaaagtgcagaatcacatcagaaaagcttattcagaaattggccattgatgtcatctattgtcacatattgtgtgttctcccttcatgacacagcatatagtgagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttcatctaaagatgttgggcaagttcttgcagtggcaggtgccagccttcttgtatatcagctttttatctacggttgggttgataaaattcttggacctatccactcaacccgcatttcagcggcactatctgtaccaattattgctgcttatccctttatgacacacttatcaggaataagacttggtgttgccctctatagtgcagcaatgatcaaaagtgttcttgctataactataattacgggcacctctcttctgcaaaacaaagcagtgccacaagggcaacggggtgctgcaaatggaatagccacaacagccatgtccttgttcaaggctattgctccggctggggcaggagttatattttcttgggcacaaaagagacaacatgtggcattttttccaggtgaccagatggtatttcttctactgaatctgaccgaggtcattgggctcatgttaaccttcaaacctttcttggctgttcctcaacaatataaatag</cdnaseq>

Protein Sequence

<aaseq>MAEPPATKVYHDGCPGCAMEQRKEEHKGIPYREFLFVAITTLAS SLPISSLFPFLYFMIRDLHVARTEEDIGFYAGFLGASYMIGRGFASILWGMVADRIGR KPVIIFSIFAVIVLNTLFGLSVKYWMAVTTRFLLGALNGLLAPIKAYSIEVCRAEHQP LGLSIVSTAWGIGLVVGPATGGYLAQPVKQYPHIFHEKSIFGRFPYLLPCLCISLFAL LVLLSCIWLPETLHKHKGLEVGVETAEASTTQESAESHQKSLFRNWPLMSSIVTYCVF SLHDTAYSEIFSLWTVSDRKYGGLSFSSKDVGQVLAVAGASLLVYQLFIYGWVDKILG PIHSTRISAALSVPIIAAYPFMTHLSGIRLGVALYSAAMIKSVLAITIITGTSLLQNK AVPQGQRGAANGIATTAMSLFKAIAPAGAGVIFSWAQKRQHVAFFPGDQMVFLLLNLT EVIGLMLTFKPFLAVPQQYK</aaseq>

Gene Sequence

<dnaseqindica>4613..4710#4189..4232#3738..3826#3575..3619#3093..3200#2868..2953#2639..2726#1971..2141#1657..1732#1528..1577#1357..1419#1219..1272#971..1073#744..846#572..632#442..482#178..310#gccaatctccaccaccacatcatcttcttcctcctccacctcttacctcgtcgtcctgagcgctcctggttgcagttgccttctcctgacaactcctcttcgccttggctaagttagctagctcatcatcacactctgcatacgtgcttgtcaactccattgagagcgtcgccgttgatggctgagccgccggcgaccaaggtgtaccacgatggctgccccggctgcgccatggagcagaggaaggaggagcacaagggcattccctacagggagttcctcttcgttgccatcaccaccctcgcctcctgtatgaattgaacacacatatacatgcagagtcaacttagtttgatgtttatcataatctcctcttggtcttatcttattctactggtttttaattagtagccttgtctgtctctccccttaaattttcagctctgccaatctcttccttgttccccttcctgtacttcatggtaagtttagtttccatgcattccatctaatttcatgaaaaatatattttttacaaaaggtactcgatccattctcttctctagagcagataagagacttgcatgttgctcggacagaggaagatattggattctatgctggatttcttggtataacatttctgaaaaataatttgtcactgagtaacaaattattttgaacacttcttcacaactacgtcaaaaatgcagtaacgtttacatgatatatttctgctgcaggcgcatcatatatgatcggtcgtggtttcgcatcgatcttgtggggtatggtggcagatcgtattggccgtaagcctgtcattatcttttccatttttgcagtgtaagcactatggtacctttcctaaaatattgacaggaatgtatccatggcatatggcatttactttgtagtctgttccatctgctaaacaatttttaacctgtctttgaatctatacttccagcattgtgctcaatactttgtttggattaagtgtgaagtactggatggctgttaccacaagatttcttcttggtgctctgaatggattgcttgcaccaataaaggtacctttttaggagacattaagatactttgaaatgtgaaagaagtttgttggggacaaatgaaggatgtggtgtcaatatcgattggtattcttattccatcaaacatttactcaattattttttctattacttatggctgcaggcgtactctatcgaagtttgccgagctgaacatcaacctttgggcctatcaattgtaaattacaaatctataaatagcaaattgcatctatatatacgatgtaagaactctgtttcatccatgtcatctaaattttaggtgagcacagcatgggggataggtcttgtagttggcccagcaactgggggatacctcgcacaggtaatattacattatattattcgggttcatagatacattttccttctttcgtcattgatcgatcaaaatgaatatttatacttgcctctttctctttcttactaccagcctgtcaaacaatatcctcatatttttcatgagaagtcaatatttgggaggtattttctattaaaaaccggttcttcatgttcaatgagatagtttgcaattgtgaatgtgtgatcgcaaattatgcagatttccatatcttctaccctgcctttgtatatcactttttgctctcttggtcctcctaagctgtatatggctaccggtatgtattacctactatttgttaagctgtattattaagattatatattatatttctatctgcaagaattttgttatgacctatttctaaataagtctgtcatgttggatgacaaaaagaatatccaaactaactgcatgatccatgtgcctggtctaccaaccctttttaccttgcacattactttatctctgttatcattttttatgactgcatatttctttggtcaactaaacaggagaccctacataagcataaaggccttgaagtgggagtggagacagctgaagcttctactactcaagaaagtgcagaatcacatcagaaaagcttattcagaaattggccattgatgtcatctattgtcacatattgtgtgttctcccttcatgacacagcatatagtgaggtagttagttacagttactaatgttccccgcaaaaaaaaaagttacagttactaatgtgataagaaattattattattattattattattattattattattattattattattattattattatatattgactgctcaatatctatgtaagaatataaataattatgcacaccaaatataaagtctctatatcaaatagttgtcatgcttttctcaataaggatggatattcatatttcttgctccaaaaataagctgaaatgcatttgctgtaataaccgtttcatatgtatccatgtcaatatttgtttttctgtttaatcatatatctctgtaagttccataataccatacctatgtatagcagattagttccattttagtttataaagtattgatctattttatgattttaaataaaagtgtgtagtcatgaaagaatctatatgctatgtggaaatgtaattttctaaacattatgtttttttaacatcagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttcatctaaagatgttgggcaagttcttgcagtggcaggtaagtcaaattcaatcaatttctttcctgcaaattttaaacacattcaattccttaatcacaggatcagggtgtttgcatttaatgttgagctctaacatcttggttcggaagataaacatctcctttgttacattgtaggtgccagccttcttgtatatcagctttttatctacggttgggttgataaaattcttggacctatccactcaacccgcatttcagcggtgagttactaaatttcagtatttcttatataatttttacagtttacttgttattggtaactgtgagttttaaaagaaaagagttcaaaatattgctggttactactttgcttttatcagctgacctttagcattgcaggcactatctgtaccaattattgctgcttatccctttatgacacacttatcaggaataagacttggtgttgccctctatagtgcagcaatgatcaaaagtgttcttgctgtaagtactttatgaacttaggattttttttaataaaaaattatagaagtacaaattcttaggtactttttaacaaacattttggttgtgccactcatggaggcatggaaaactaatactgcaacaccacgaaaatttcatagcaaaggtaatattgcacaattgttcagagagactatgtgaaaataaataccaattttttagttcaaaagagaggttgagaaaaaaatatccatgagcttacagttctgaaatttaacccatataaaattagttagcacttcactgcaaattgctagataatttagtttatttatttttcacatggcatatttgaagatatcaagatactgatattttgtaatgttgatcagataactataattacgggcacctctcttctgcaaaacaaagcagtggtacttgtcgaacttatctcaatcgactgttgtctgataggctcaaaaagaaaagaaatttctctgatacactaatatcaaataaatttaatttttgaaaattgcatcgttttgacagccacaagggcaacggggtgctgcaaatggaatagccacaacagccatgtccttgttcaaggctattgctccggctggggcaggagttatgtaagtacaaatgttgctgtctacaactcctagttataaacaaacaactcaacaaagctactagactcagtatcactttccaagattgaacagtagatttctggctgacataattgtcagtttgcaatttgcagaaagactagagggatttttttttgaacaaacctacatttagattttaccaatttcaatgaatagagcagaaaaaaaaactgtaatcatgaaaatgttggtgattagttcgcccttcccaatttagtgaatagttgttgcctgaagcctaaagatgaacatgtccttacgaaactgtaaacccgtttgaagaaagaaaaggactgactgttcaaaacctgtggttgcagattttcttgggcacaaaagagacaacatgtggcattttttccaggtaaataactaaatactccaatgaatttttaggaaccatcaactgtgtgtgacaaccatttactacaatactttaaattagagcaagtttaatagtatagccaactagtaaatccaaattatctacaatcaatttgatagccaattcataaaatagttacctacaagtatatactgcactattaatatttggtcccacctgtcatacacacaggagtccgtgttgcagcccgcttctcttctctctttcctcttttatctcctccacatgtgtttatagctggtttatagtctgctattgtacctgctcttaggtatgtataaatcggtgctttgtaatgtttatttgatcatataaattgtaaattcaacgttgtgcaggtgaccagatggtatttcttctactgaatctgaccgaggtcattgggctcatgttaaccttcaaacctttcttggctgttcctcaacaatataaatagaacattcagatactgctagctggtgtgacaaagatcataaagatgtagttacagtgagtaataagtatggcttggtattaaaagatggtttagatgtggttatagcataatggtaggatcatgcagcattccagtgcagagtctctgttggattttgttctgctttgggcttatgagcaagataaccttgtatattgcagtgttgaatttgaataactgctcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0132800, RefSeq:Os12g0132800