BGIOSGA024975

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Revision as of 06:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024975| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024975, complete gene.| tag = P0617C0...")
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Gene Name

BGIOSGA024975

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024975, complete gene.

LocusTag

P0617C02.115

Ensembl Transcript ID

BGIOSGA024975-TA

Ensembl Protein ID

BGIOSGA024975-PA

Length

4560

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:317686..322245

Sequence Coding Region

322018..322245,321134..321278),complement(320945..321054,320745..320864),complement(320442..320645
,320125..320334),complement(319977..320051,319750..319896),complement(319557..319680
,319345..319454),complement(319056..319217,318759..318958),complement(318332..318413
,318147..318251),complement(317947..318051,317686..317853

Genome Context

<gbrowseImage1> name=IndicaChromosome07:317686..322245 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:317686..322245 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCACGCGCGCCACTCGCCCCGGGATGCTCCACCAGAAGGAGAACGCCGCCGACGCGCAGGCCGGCAAGCGCCAGCGCACGGCCGCCGGGTCCGCCGCCCGCGCCCCGCTCTCCGCCAACGCCGCTCCGCCCGCCCCTGACCCCGCCATCGAGTTCGCCGGGAGGGACGATGTCGACGCCCTCCTCAACGAGAAGATGAAGGGCAAGAACAAGATGGACTACAAGGGGAAGAGCGAGCAAATGATGGAATACATAAAAAAGCTACGGGCTTGCATCAAGTGGCTGCTAGAGAGGGAGGATACAAACCTGGCTGAGATTGGGAAGCTCAATGGTCTACTTGAGGCGGCAGAGAAACATCACTCTGAGATTGTGGCTCAGCTGAAAAGTGCAATAGAAGAATCAAAGGCAATAAATGAGGAGCTTCAGAGACAGTATGCTTCTTTAGAGGAGAATCTAAAGAGAGTGGAGGCTGAGAAACTGGATGCCCTTAGGTCTTATGGAGATGAAAAGGAAGCAAGGATTGCTGTTGAGGCTTCCCGAAATGAGCATTTGGAAGATCTTAGAAGGATTAAGTTGGAGGAAAAACGCCTTAATGATCAGATCAAGATGCTTCAGGACACAAATAAGAGGCTTCAAGAATACAACACTAGTTTGCAGCAGTATAACAGCAACCTCCAGGCAGATGCAACGAAGAATGGTGAAACAATAGCAAAGCTGCAGAAAGAGAAGAACACTATGGTAGAAACAATGAATGGTTTGAAGGACCATGCTAACTCTGTAAAGATGCAGCTAGATTTGGCAAAGTCTTCCCAAAATGAAGCTCTAAAACAAAAGACCGACTTGCTAAAGGAAGTTGATAATCTCAGGGGTGAACTCCAGCAAGTAAGGGATGACCGTGATCATAAATTAGCTGAAATACATTCCTTGTTGGCCGATGTAAGTACATACAAGGAAATGACTGGAAAGTCGGTAGCAGAATTGGATAATGCCATGACAAGAAGTACTGCCCTTGAGGAAACATGTTCGTCCCAAGCAGAGAGAATTAAAACATTGGAGCTGCAGCTTGCATCAGCTAACGAAAAGTTAAAGAGATCTGATTTGACTACTATGGAGACGATGACTGAGTATGAGAAGCAAAAAAGAATGTTGGAGGATCTGCAATTACGACTCGAAGAAGCTGAGCAACAAATTTTGGACGGAGAGAATTTGCGGAAAAGACTCCATAATACAATACTCGAGCTTAAGGGAAACATTCGAGTATTCTGTAGGGTGCGACCTTTATTGCCAAATGAATCAGGAGCTGTTGCTTATCCAAAGAGTGGAGAAAACTTAGGTCGTGGCATTGAGTTGACACATAATGCTCAAATGTATTCTTTCACATTTGACAAAGTATTTGAGCAGTCGGCATCACAAGAAGATGTGTTCATTGAGATTTCCCAACTCATCCAAAGCGCCCTTGATGGCTACAAGGTGTGCATATTTGCATATGGCCAAACTGGCTCGGGTAAAACATACACAATGATGGGAAATCCAGAATTGCATGACCAGAAAGGATTAATTCCGAGATCACTTGAACAAATTTTCCAAACAAGCCAGGCTCTTATTTCACAGGGATGGAAATATAAGATGCAGGCATCTATGCTGGAAATCTACAATGAAGCCATACGTGATCTGCTAGCCACTAATCGCACAACTGTTCAAGATGGTGGCGCTTCAAAGTACAGTATCAAGCATGATGCCAATGGTAATACCCATGTATCAGATCTCACAATTGTCGATGTATCGAGTATCAATGAAGTTTCTTCTCTCCTCAAGCGGGCTGCTCAGAGCAGATCTGTTGGAAGAACACAGATGAACGAAGAATCATCTAGAAGTCATTGTGTGTTCACGCTTCGAATTTTTGGTGTCAATGAGGGAACAGACCAGCAGGTGCAAGGAGTGCTCAATCTAATCGATCTTGCCGGCAGTGAGCGGCTTAACAAGAGCGGTGCCACCGGAGATAGGCTAAAGGAGACACAGGCTATTAATAAGAGCCTCTCATGCTTGAGCGATGTAATCTTCTCCATTGCAAAGAAAGAGGAGCACGTTCCGTTCAGGAACTCAAAATTAACGTACTTGCTACAGCCATGCCTTGGAGGAGACTCGAAGACACTTATGTTTGTGAATCTGTCTCCAGAGGTGTCGTCTACAGGGGAGTCAATTTGCTCGCTACGGTTCGCAGCACGGGTGAACTCGTGCGAGATTGGCATCCCTCGTCGTCAAACCCAAGTGCGTAGCTTGGCGCAAGGATGA</cdnaseq>

Protein Sequence

<aaseq>MSTRATRPGMLHQKENAADAQAGKRQRTAAGSAARAPLSANAAPPAPDPAIEFAGRDDVDALLNEKMKGKNKMDYKGKSEQMMEYIKKLRACIKWLLEREDTNLAEIGKLNGLLEAAEKHHSEIVAQLKSAIEESKAINEELQRQYASLEENLKRVEAEKLDALRSYGDEKEARIAVEASRNEHLEDLRRIKLEEKRLNDQIKMLQDTNKRLQEYNTSLQQYNSNLQADATKNGETIAKLQKEKNTMVETMNGLKDHANSVKMQLDLAKSSQNEALKQKTDLLKEVDNLRGELQQVRDDRDHKLAEIHSLLADVSTYKEMTGKSVAELDNAMTRSTALEETCSSQAERIKTLELQLASANEKLKRSDLTTMETMTEYEKQKRMLEDLQLRLEEAEQQILDGENLRKRLHNTILELKGNIRVFCRVRPLLPNESGAVAYPKSGENLGRGIELTHNAQMYSFTFDKVFEQSASQEDVFIEISQLIQSALDGYKVCIFAYGQTGSGKTYTMMGNPELHDQKGLIPRSLEQIFQTSQALISQGWKYKMQASMLEIYNEAIRDLLATNRTTVQDGGASKYSIKHDANGNTHVSDLTIVDVSSINEVSSLLKRAAQSRSVGRTQMNEESSRSHCVFTLRIFGVNEGTDQQVQGVLNLIDLAGSERLNKSGATGDRLKETQAINKSLSCLSDVIFSIAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNLSPEVSSTGESICSLRFAARVNSCEIGIPRRQTQVRSLAQG</aaseq>

Gene Sequence

<dnaseqindica>1..228#968..1112#1192..1301#1382..1501#1601..1804#1912..2121#2195..2269#2350..2496#2566..2689#2792..2901#3029..3190#3288..3487#3833..3914#3995..4099#4195..4299#4393..4560#ATGTCCACGCGCGCCACTCGCCCCGGGATGCTCCACCAGAAGGAGAACGCCGCCGACGCGCAGGCCGGCAAGCGCCAGCGCACGGCCGCCGGGTCCGCCGCCCGCGCCCCGCTCTCCGCCAACGCCGCTCCGCCCGCCCCTGACCCCGCCATCGAGTTCGCCGGGAGGGACGATGTCGACGCCCTCCTCAACGAGAAGATGAAGGGCAAGAACAAGATGGACTACAAGGTCAAGGATTTTTCTCCTCCCCATTTCTTCTTCTTTTCCCCCCACACCCTAATTTACGGACAGACTTACTATTGCTAGATCAGTATTTCCCCCCATAGTCGTTTCTTATGGATCTTGGCCTTATGCGTGGCTTGCTACTGCGGATTGGAATATTTTTTACCTCTTTCCTAAATACTGTACTAAGTAAATACTAGTACATAGCCGGTGTTCCTTCCCGGCTGTCAAAATTGATGCATGTTATGTTCTCTACCTTAAAATGTTTAAACAACTTAAGCCACGCCCAGAGTTCCAACCAGAGGATTCGACAACACTACAGTGGCAGTAACCCTACTGAACTACCTGTAACAATTGGTTAGGTTAGAGGCTGTGTCATATGTTATGTTGGCTACTCAGTAATTTGGATAAGTCATTTCTGTATGCTCACACCAAAAGGACTAGCTAGAGCAAATACAAAACCCTCAAACAGTCTGAGACAAACAACTGTCTAATTTTCACAATGGATAATCCTGAGCACCATGTTGCTCCAAGGACCTGAACCGCAAATGTGTCCACTGAACTATATAAAATTGGACAGCGTCCTTCCACCGCCTCGGTGAAAAGATGTTCTTTTCGACTTAGTAGTTGAAATTTTGAATGTTACTTTGCCGCTTGGTTTGCTACCTTGAATGACTCATCATCTGTGTTTAGTTGTTTACACTGGCTGATATTTTCTTTTCCCATGCTGTGATTGTTCCTGCAGGGGAAGAGCGAGCAAATGATGGAATACATAAAAAAGCTACGGGCTTGCATCAAGTGGCTGCTAGAGAGGGAGGATACAAACCTGGCTGAGATTGGGAAGCTCAATGGTCTACTTGAGGCGGCAGAGAAACATCACTCTGAGATTGGTACCACCCTTTCATTTCATATCATGACACTTTGTGCGCTTGTTGATTCTACTGACTGAATCTATGCTATGTCATCTAGTGGCTCAGCTGAAAAGTGCAATAGAAGAATCAAAGGCAATAAATGAGGAGCTTCAGAGACAGTATGCTTCTTTAGAGGAGAATCTAAAGAGAGTGGAGGCTGAGAAACTGGTGGGTGACTCGTGCGTCTGGTTAAGTTCCCTCTTATTGCTCCAGGAGTGTTCTATGATTAACAAATTTTTGAAATGTAGGATGCCCTTAGGTCTTATGGAGATGAAAAGGAAGCAAGGATTGCTGTTGAGGCTTCCCGAAATGAGCATTTGGAAGATCTTAGAAGGATTAAGTTGGAGGAAAAACGCCTTAATGATCAGGTCTTACTTTCTTTCTAGAAAAGCTTATGTGGTTAATAAATAACTCTGCACTTTCCATTCACTACAGATTATGCTTTGACTGTGTTTTGGCTCCTTTAGATCAAGATGCTTCAGGACACAAATAAGAGGCTTCAAGAATACAACACTAGTTTGCAGCAGTATAACAGCAACCTCCAGGCAGATGCAACGAAGAATGGTGAAACAATAGCAAAGCTGCAGAAAGAGAAGAACACTATGGTAGAAACAATGAATGGTTTGAAGGACCATGCTAACTCTGTAAAGATGCAGCTAGATTTGGCAAAGGTATGATCTTAGTCCCGGCCTTTCAGTACAAACATCTGTTCATCTTAAATTATACTGCTGTATTGCATTGATTCCGTGGTGATAAACAACGCCTCTATTCCATGCAGTCTTCCCAAAATGAAGCTCTAAAACAAAAGACCGACTTGCTAAAGGAAGTTGATAATCTCAGGGGTGAACTCCAGCAAGTAAGGGATGACCGTGATCATAAATTAGCTGAAATACATTCCTTGTTGGCCGATGTAAGTACATACAAGGAAATGACTGGAAAGTCGGTAGCAGAATTGGATAATGCCATGACAAGAAGTACTGCCCTTGAGGTATGCTCCTGTGCTGTAATTGATTCAATGTCTAATTACTGCTATCAGTGTAGCTAATGTATTTTCAATATAGGAAACATGTTCGTCCCAAGCAGAGAGAATTAAAACATTGGAGCTGCAGCTTGCATCAGCTAACGAAAAGTTAAAGGTGCATACTGAAAGCCTCTTTGTTTCAATATATTATATCCACAAGCACTTAAGGACTTGCTATTTTATTTAATTATGTAGAGATCTGATTTGACTACTATGGAGACGATGACTGAGTATGAGAAGCAAAAAAGAATGTTGGAGGATCTGCAATTACGACTCGAAGAAGCTGAGCAACAAATTTTGGACGGAGAGAATTTGCGGAAAAGACTCCATAATACAATACTCGTACTGTCTCTTAAACTGTTCTTGGTCTTTTGTGTTTCTAGTGTTGTTGCTAAGACTCTTGCATTGCAGGAGCTTAAGGGAAACATTCGAGTATTCTGTAGGGTGCGACCTTTATTGCCAAATGAATCAGGAGCTGTTGCTTATCCAAAGAGTGGAGAAAACTTAGGTCGTGGCATTGAGTTGACACATAATGGTATAGTAACACTTACTGCGATCCTTCTGTGTTTTTTACTTTCATGTCTGCACCTCTTGGAAGATTTATCTCATTCCAGTAAATCTTCATTTTTCTTCACAGCTCAAATGTATTCTTTCACATTTGACAAAGTATTTGAGCAGTCGGCATCACAAGAAGATGTGTTCATTGAGATTTCCCAACTCATCCAAAGCGCCCTTGATGGCTACAAGGTAACATTTACTTGTTGCTGTGTTTTGAGAAGTGCAAGAGCACAACCTCGCTATAGGAGAGGGAAAAAAGTTTGTCCATAAAAGTTAGTATTTATAATTCGTGCTAACTAATGTGAAAACAACTCAGGTGTGCATATTTGCATATGGCCAAACTGGCTCGGGTAAAACATACACAATGATGGGAAATCCAGAATTGCATGACCAGAAAGGATTAATTCCGAGATCACTTGAACAAATTTTCCAAACAAGCCAGGCTCTTATTTCACAGGGATGGAAATATAAGATGCAGGTGAGTTCTTACCCACTTCAATTGGTCAGTTTGTTTGAGCTAACAAAGGTGCAGGCTTTCTATAGTTGTAACTGTCATGTTTACATTGAACATCTAGGCATCTATGCTGGAAATCTACAATGAAGCCATACGTGATCTGCTAGCCACTAATCGCACAACTGTTCAAGATGGTGGCGCTTCAAAGTACAGTATCAAGCATGATGCCAATGGTAATACCCATGTATCAGATCTCACAATTGTCGATGTATCGAGTATCAATGAAGTTTCTTCTCTCCTCAAGCGGGCTGCTCAGAGCAGGTTACACTCTAGTTCTTCTCATCAGTTTTTCAAATCTTCAATTAAATTCATGAGAACAGAAGAATACAAAGAAGGCAAAGAACCTGGATATAGTTTCTGTGAGCACATAGAAACATAATCAGGTTAGCATAAAGCCTGAAGTGAAGTTAGAAGCATAATTTCAATGAAATGCAATAAGTCAAAAACTAGCTTTATTATGACACCATTTTCAAAATCTTTGTGCTTTACATACTGTTGTGCTATAGAGTGCACAATAATTTAGCTGAATTCTCCAAGAAAGAGTTCCGAATCTGTACCTTAAATTTGCTGCCATACGTTGTACACAGCTTTATTATTTATCTGCAGATCTGTTGGAAGAACACAGATGAACGAAGAATCATCTAGAAGTCATTGTGTGTTCACGCTTCGAATTTTTGGTGTCAATGAGGTATGCGATATCTTCTAATGTAGGTCTTGCTAATGCCTGGTAATTTTTTGTATTCATCATTTGGATTGTTTTCTCTACAGGGAACAGACCAGCAGGTGCAAGGAGTGCTCAATCTAATCGATCTTGCCGGCAGTGAGCGGCTTAACAAGAGCGGTGCCACCGGAGATAGGCTAAAGGAGACACAGGTAATTTGCTATTTCACACCTCAGTTTTTGTTGCATCTAAGGTGTGTACATGGTACAATGCGTAACCACTGTTATGATATAAATTTGCTATTTAGGCTATTAATAAGAGCCTCTCATGCTTGAGCGATGTAATCTTCTCCATTGCAAAGAAAGAGGAGCACGTTCCGTTCAGGAACTCAAAATTAACGTACTTGCTACAGGTAAATTCTAAGCACTCAGCTAAGAATATCTGCAAACTTGTTCTAGTTTCCGTGGCTATAATGTGTGAATGATTTTGTTCCCCTTGGACACAGCCATGCCTTGGAGGAGACTCGAAGACACTTATGTTTGTGAATCTGTCTCCAGAGGTGTCGTCTACAGGGGAGTCAATTTGCTCGCTACGGTTCGCAGCACGGGTGAACTCGTGCGAGATTGGCATCCCTCGTCGTCAAACCCAAGTGCGTAGCTTGGCGCAAGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024975

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA024975&oldid=50569"