BGIOSGA024980

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Revision as of 06:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024980| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024980, complete gene.| tag = B1026C1...")
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Gene Name

BGIOSGA024980

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024980, complete gene.

LocusTag

B1026C12.35

Ensembl Transcript ID

BGIOSGA024980-TA

Ensembl Protein ID

BGIOSGA024980-PA

Length

3524

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:189113..192636

Sequence Coding Region

192189..192636,191992..192086),complement(191771..191842,191530..191609),complement(191269..191350
,189877..189924),complement(189663..189731,189113..189535

Genome Context

<gbrowseImage1> name=IndicaChromosome07:189113..192636 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:189113..192636 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGGCGCAGCAGGAGAGCATCAGCAGCGGTGGTGACGGCAACAATAATAATAATAAGCAGGTGGCGGTGGTGGTTGTTGAGGAGGCGTCGACGCCGTCGTCGGCCTTCAAGTTCAACGTGCACGCGCCGGAGTTCGTGCCTGCCATGTCGCCGACGGCCAGTCCGATGTCGGCGCCCGCCGGCAGCAGCAGCTTCTACTCCCCCTTCGGGCTCCACGTGCAGCCCGATCACTGGAGCTTCTTCCATGACCACGAGCCCGTCTTCTTCATGCCCGACTTCAAGTTCGCCGCCGCCGCCGCCGCCAGCGCGCAGCCCAAGCCCACCTCCGCCGCCGACATGCCCCACAAGATCGTCAAGCAGGTCGAGTACCAATTCAGCGACATTAACCTCGTCGCCAACGAGTTCTTGCTCAAGATCATGAACAAAGATTCTGAAGGTTACGTCCCCTTATCCGTGATTGCTTCTTGGAAGAAGATCAAGTCTCTTGGAGCAACCAATCAAATGCTGGTCAAGGCTCTTCGCACCTCCACCAAGCTGATTGTGAGTGATGACGGCAAGAAAGTCCGGCGGAGGCAGCCATTCACGGAGAAGCACAAGGAGGAGCTTCAGTCAAGGATGATCATAGCTGAGAATTTGCCAGAGGACTCATCGAGAAACAGCCTGGAGAAAATCTTCGGTGTCGTTGGAAGTGTGAAGAACATAAAGATGTGCCACCCTCAAGAGCCTAGCACGGCAAGAGCTTCCAAGTCAGACACTCTAGTCAGTAACAAGATGCATGCACTGGTGGAGTACGAGAGCTCGCAGCAAGCTGAGAAAGCAGTGGAGAAGCTGAACGACGAACGGAACTGGAGGAAAGGCCTTCGGGTGCGCACCGTCCTCAGGCGATCGCCCAAGTCGGTGATGAGGCTGAAGCGGACGGAGTTCGACCTCAACTCGGACGACGAGCAGTCACCGATGTCGTCGGACTTATCCCCCACGGCGACGGCGACGGCGGCGGAGTTGTCGGCGGAGGCGGCGGGTCACGATCAGGGCGGGGAGCAGCAGATGATGAACAGCAGCAAGAAAGGAGGAGGGTGGGCGCGAGGGGGCCGAGGGAAGCTGCAGGTGGCGGCGCCGCACAGCCCGCAGTCGGCCCCCGCCGGCAGTGTGGGGCACTTCGAGCCGGCGAGCCCTCGTCACAAGCTGCCGGCGAGCCCCCGCCACAAGTGCCCCTCCAGCCCACGCCAGCCGCCTCCTCACGCCCACGGCCCCAGGATGCCCGACGGCACCCGCGGCTTCACCATGGGCCGCGGCAAGCCCCTCCTTGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MATAQQESISSGGDGNNNNNKQVAVVVVEEASTPSSAFKFNVHAPEFVPAMSPTASPMSAPAGSSSFYSPFGLHVQPDHWSFFHDHEPVFFMPDFKFAAAAAASAQPKPTSAADMPHKIVKQVEYQFSDINLVANEFLLKIMNKDSEGYVPLSVIASWKKIKSLGATNQMLVKALRTSTKLIVSDDGKKVRRRQPFTEKHKEELQSRMIIAENLPEDSSRNSLEKIFGVVGSVKNIKMCHPQEPSTARASKSDTLVSNKMHALVEYESSQQAEKAVEKLNDERNWRKGLRVRTVLRRSPKSVMRLKRTEFDLNSDDEQSPMSSDLSPTATATAAELSAEAAGHDQGGEQQMMNSSKKGGGWARGGRGKLQVAAPHSPQSAPAGSVGHFEPASPRHKLPASPRHKCPSSPRQPPPHAHGPRMPDGTRGFTMGRGKPLLV</aaseq>

Gene Sequence

<dnaseqindica>1..448#551..645#795..866#1028..1107#1287..1368#2713..2760#2906..2974#3102..3524#ATGGCGACGGCGCAGCAGGAGAGCATCAGCAGCGGTGGTGACGGCAACAATAATAATAATAAGCAGGTGGCGGTGGTGGTTGTTGAGGAGGCGTCGACGCCGTCGTCGGCCTTCAAGTTCAACGTGCACGCGCCGGAGTTCGTGCCTGCCATGTCGCCGACGGCCAGTCCGATGTCGGCGCCCGCCGGCAGCAGCAGCTTCTACTCCCCCTTCGGGCTCCACGTGCAGCCCGATCACTGGAGCTTCTTCCATGACCACGAGCCCGTCTTCTTCATGCCCGACTTCAAGTTCGCCGCCGCCGCCGCCGCCAGCGCGCAGCCCAAGCCCACCTCCGCCGCCGACATGCCCCACAAGATCGTCAAGCAGGTCGAGTACCAATTCAGCGACATTAACCTCGTCGCCAACGAGTTCTTGCTCAAGATCATGAACAAAGATTCTGAAGGTTACGGTACGTACGTCATTCCATTATATATATATATATATACTCCTATATATATTTCTGCTTGCTAGCTTAATTAGCTCCTAAAACCGTACGTGATTTTGCATTCAGTCCCCTTATCCGTGATTGCTTCTTGGAAGAAGATCAAGTCTCTTGGAGCAACCAATCAAATGCTGGTCAAGGCTCTTCGCACCTCCACCAAGCTGGTAATCAACAAACTAACTAATTAAGCATCGATCGATCGATCGATCGATATAGTTAGTATATGGTTCATCGAATATATACTTGCTTTGGGTACGTACATACTCCGATCCATCTGTGTGTTTTCGTTAATATATATATTTCGTGCATGCAGATTGTGAGTGATGACGGCAAGAAAGTCCGGCGGAGGCAGCCATTCACGGAGAAGCACAAGGAGGAGCTTCAGGTCTCATCACTCTGCTCTCTCTCTGTCTCGATGCATGTGTATATCTGATTAATTAGCTAGCTAGCTATATATAGTGACAATCAAATTAAAATTAAACAAATATATATGATACTTAAATTAATTAATTGTTGGTGCACGTTTATACGTACGCGCGCGCGCAGTCAAGGATGATCATAGCTGAGAATTTGCCAGAGGACTCATCGAGAAACAGCCTGGAGAAAATCTTCGGTGTCGTTGGAAGGTCAGGAAGTGCCGCCGGGCCTCAGATAGTCGTGTTGCATGCTTCCCACATTGTATACGAGTGTATTGTTTTGTGTGTATTATATTACTACTACGTTGTTGAAATAAATTATATTACTACTTGGCATGCATATATATGTGAAAAATCGATCGTTGGGGTGGGCCGGCATGCATGTGCAGTGTGAAGAACATAAAGATGTGCCACCCTCAAGAGCCTAGCACGGCAAGAGCTTCCAAGTCAGACACTCTAGTCAGTAACAAGGTATTTATATGTTGAGTAGTACTTTGTTAAGCTATATATACATCACTGTTTGTTTGTACTTTTCTTTTAACTACTCACACCAGATAGTGCGAAGTTCATATTGATATAGTAGGAAAAAAAATTATAAGATTACGACCCTCGGAGATTGTAACTAGGAAAAACAAAGAAAACAAATACACCGCTACCGAGAGTTAGTATATCTCCTCACACCACACCCTGGAGAAGACACTAGCACAAAACCAACCACCGCTAAGCGTGATTGATCGCCACTAGGCTAACAAGGGGGGTTGCAAATGCCCCGCCTAACACCGATTCAACCCAGAAGGACATCGAAAGACTTACGGTTATCCTCATGTAGAGAGATTGAGGAGAGGGAGAGGGCGAGAGAGAAGGAGATCCACTCGTCCCTCGCCTCAACTTGATGTAGACATCCGAGAGCCGTGAGCGGCAAATCAGAGAGAAGGCGATGAAGGCAAGGAACAGGACCTCCTAGACAGCGCCTTCAGAAAGACCATGGCATCTTAGACTTCATCGTTACCCGTTCAGAAGGACTTGGTTTTCACATGGAGGGCCCTGTCAAGGGTGAAAGGGTAGTCGCTCGATAGTGCCGCAAAGGGGAACGCGGCGTCCGAAAATGTCGCCATTGCCAGCCCGAGTAGTCCCAAGCTAGGCTTTCACCTGCAAACCGCCCCACGACACCAGTCTTTGCCACTCTCAAGCTCTGCCACCTGCACAACCTCTGCCACACCAGGCACCAACACCCCACCACCAGCCAAGCCTGTCCTGGACTCTCATGGACACAGGCTGCAACGGCCTTCCTGTTGTCGTCCGCGCCAGTCTCTTCCTGCCGCTGCATTAGCAATGGCCACGCTTGCCCCGCACGGCGCCTCCTCTCTGTGCATACCTCTCCTCACTCCGTCCCACGTCTCCACCAGATTGTCACCATCCCAGGAAGCGCCACCGTCGGGGCTATCCTCTCCTGATCTGGCCGTGGTGAGCCGGATCCATCGCGCCAAACCACTCCGGCCGCCGGTCTCCGCACCCGACTCGTGCTCCGCCTCCCGCACCGAGGAGGAGCTTCGTTGGGGTTGATTTTCCCGCCACCACCTTCTCGGCTGGCCGCTAGCTCGGGCTCCGGTGGCAAGGAGGGGTAAGCGGGGTGGCAGTGTGGGCGGCTAGGGTTTCGCTCATGAGCCGCCCGCGCAAGAGCGACATGGTTTTTTTTTTTGCAGCAATAAAGTTTGTTTGTATTGTAGCAGACGACTCACTCAGAAATTCCATGGTAGAAACTAATTAAGATGCATGCAGTAACTGGTGTTATTGACGTATGTTCGTTGTGTGTAGATGCATGCACTGGTGGAGTACGAGAGCTCGCAGCAAGCTGAGAAAGCAGTGAGTAGAGTAGAGTAGTCGTTTTGTTTTTCCAGAAGAATATATATATATATATATATATATATATATATATATATATACACAGTATGTGAATATACGCAAGCTAGGAGAAAAGAAATCAAGTGGAATGCATGCATGTATGCAGGTGGAGAAGCTGAACGACGAACGGAACTGGAGGAAAGGCCTTCGGGTGCGCACCGTCCTCAGGCGATCGGTACTAAATTTTTATATATGATCGATCCCAAATTAAACTATAATAACCGTCCGGGCAATTGGATCATCAATTTAAATTTAAATTTTGAAATGATTTTTGATGCATGCATGGTCGCGTCGGTGGACAGCCCAAGTCGGTGATGAGGCTGAAGCGGACGGAGTTCGACCTCAACTCGGACGACGAGCAGTCACCGATGTCGTCGGACTTATCCCCCACGGCGACGGCGACGGCGGCGGAGTTGTCGGCGGAGGCGGCGGGTCACGATCAGGGCGGGGAGCAGCAGATGATGAACAGCAGCAAGAAAGGAGGAGGGTGGGCGCGAGGGGGCCGAGGGAAGCTGCAGGTGGCGGCGCCGCACAGCCCGCAGTCGGCCCCCGCCGGCAGTGTGGGGCACTTCGAGCCGGCGAGCCCTCGTCACAAGCTGCCGGCGAGCCCCCGCCACAAGTGCCCCTCCAGCCCACGCCAGCCGCCTCCTCACGCCCACGGCCCCAGGATGCCCGACGGCACCCGCGGCTTCACCATGGGCCGCGGCAAGCCCCTCCTTGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024980

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA024980&oldid=50574"