BGIOSGA024985

From RiceWiki
Revision as of 06:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024985| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024985, complete gene.| tag = B1026C1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024985

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024985, complete gene.

LocusTag

B1026C12.20

Ensembl Transcript ID

BGIOSGA024985-TA

Ensembl Protein ID

BGIOSGA024985-PA

Length

1408

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:115966..117373

Sequence Coding Region

117009..117373,116570..116918),complement(116074..116350,115966..115982

Genome Context

<gbrowseImage1> name=IndicaChromosome07:115966..117373 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:115966..117373 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGGCGGCGGCGTCGTGGTCCCGGTCGGTGACGGAGACGGTGCGGGGGTCTCACCAGTACACGGTGAAGGGGTTCTCGATGGCGAAGGGCGTAGGGGCCGGGCGGTACGTGAGCAGCGACACCTTCGCGGTGGGCGGCTACCACTGGGCTGTCTACCTCTACCCCGACGGCAAGAACCCCGAGGACAACGCCAACTACGTCTCCGTCTTCGTCGCCCTCGCCTCCGACGGCGCCGACGTCCGCGCCCTCTTCGAGCTCACCCTCCTCGACCAGTCCGGCCGCGGCCGCCACAAGGTCCACTCCCACTTCGACCGATCCCTCCAGGCCGGACCCTACACCCTCAAGTACCGAGGCTCCATGTGGGGCTACAAGCGCTTCTACCGAAGATCACTCTTAGAATCATCCGACTTTCTCAAGGACGACTGCCTCGTTATGAACTGCACTGTAGGCGTCGTCAAGAACCGTCTCGAAACACCAAAGAACATCCACATCAATATTCCTCCATCCGACATGGGCCGTTGCTTCAACAACCTCCTCAATCTCCGCATCGGCTGTGACGTATCTTTTGAGGTGGGTGATGAAAGAGTCCAGGCGCACAAGTGGATTCTTGCTGCCCGCTCCCCTGTATTCAAAGCCCAATTCTTTGGTCCTATTGGGAATCCTGACCTACACACAGTCATTGTCGAGGATGTAGAACCTCTTGTCTTCAAGGCAATGGTGAATTTCATATACTCTGATGAACTTCCTAGTATTCATGAACTAGCTGGATCTGTCTCAACTTGGACATCGACAGTAGTAGTACAGCATTTGTTGGCGGCTGCTGACAGATATGGACTAGATCGGCTACGTCTGCTATGCGAGGAAAAGTTATGTGATGAACTCACTGCTGAAACAGTTGCAACAACCTTAGCCCTAGCTGAACAACATCATTGTACTCAGCTGAAATCTGCTTGTCTGAAGTTCACTGCTGTTCGGGAAAATCTGGGAGAACAACCTTATGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MTAAASWSRSVTETVRGSHQYTVKGFSMAKGVGAGRYVSSDTFAVGGYHWAVYLYPDGKNPEDNANYVSVFVALASDGADVRALFELTLLDQSGRGRHKVHSHFDRSLQAGPYTLKYRGSMWGYKRFYRRSLLESSDFLKDDCLVMNCTVGVVKNRLETPKNIHINIPPSDMGRCFNNLLNLRIGCDVSFEVGDERVQAHKWILAARSPVFKAQFFGPIGNPDLHTVIVEDVEPLVFKAMVNFIYSDELPSIHELAGSVSTWTSTVVVQHLLAAADRYGLDRLRLLCEEKLCDELTAETVATTLALAEQHHCTQLKSACLKFTAVRENLGEQPYG</aaseq>

Gene Sequence

<dnaseqindica>1..365#456..804#1024..1300#1392..1408#ATGACGGCGGCGGCGTCGTGGTCCCGGTCGGTGACGGAGACGGTGCGGGGGTCTCACCAGTACACGGTGAAGGGGTTCTCGATGGCGAAGGGCGTAGGGGCCGGGCGGTACGTGAGCAGCGACACCTTCGCGGTGGGCGGCTACCACTGGGCTGTCTACCTCTACCCCGACGGCAAGAACCCCGAGGACAACGCCAACTACGTCTCCGTCTTCGTCGCCCTCGCCTCCGACGGCGCCGACGTCCGCGCCCTCTTCGAGCTCACCCTCCTCGACCAGTCCGGCCGCGGCCGCCACAAGGTCCACTCCCACTTCGACCGATCCCTCCAGGCCGGACCCTACACCCTCAAGTACCGAGGCTCCATGTGGTATTATCCCTTGCTTTCCCAATTCCCATTCATTCATGTTTCTTCTATGTAGCAATTCAATTCAATTCATCTCTTATACATACATACTAGGGGCTACAAGCGCTTCTACCGAAGATCACTCTTAGAATCATCCGACTTTCTCAAGGACGACTGCCTCGTTATGAACTGCACTGTAGGCGTCGTCAAGAACCGTCTCGAAACACCAAAGAACATCCACATCAATATTCCTCCATCCGACATGGGCCGTTGCTTCAACAACCTCCTCAATCTCCGCATCGGCTGTGACGTATCTTTTGAGGTGGGTGATGAAAGAGTCCAGGCGCACAAGTGGATTCTTGCTGCCCGCTCCCCTGTATTCAAAGCCCAATTCTTTGGTCCTATTGGGAATCCTGACCTACACACAGTCATTGTCGAGGATGTAGAACCTCTTGTCTTCAAGGTAATTGCTACATGCTGAATCAACAACTTTCCTATCCTGTGCACTCCTAAATCCCTTCCTTGTTGAGCATCTTACTAATCTTTACTTCTATCTACTGTTTCATTCACAAAACATGTTCTCGATCATGTCTACTTCCTAGGCCACATGCCATTGTATGCTTTGTCATTCGATCGAAAATATCCCCTCACAGTAAATATGCAATTTCCCCCCGCAATGCAGGCAATGGTGAATTTCATATACTCTGATGAACTTCCTAGTATTCATGAACTAGCTGGATCTGTCTCAACTTGGACATCGACAGTAGTAGTACAGCATTTGTTGGCGGCTGCTGACAGATATGGACTAGATCGGCTACGTCTGCTATGCGAGGAAAAGTTATGTGATGAACTCACTGCTGAAACAGTTGCAACAACCTTAGCCCTAGCTGAACAACATCATTGTACTCAGCTGAAATCTGCTTGTCTGAAGTTCACTGCTGTTCGGGAAAATCTGGGAGGTATGTACTATGCTCTCTGGATTAATTTTTTTAGGCCTTTGTTGAAAGAACATAATGCTGTGTGTACCCTGTTTTCCTATTTTTGCAACAGAACAACCTTATGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024985