BGIOSGA025020

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Revision as of 06:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025020| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025020, complete gene.| tag = OsI_246...")
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Gene Name

BGIOSGA025020

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025020, complete gene.

LocusTag

OsI_24622

Ensembl Transcript ID

BGIOSGA025020-TA

Ensembl Protein ID

BGIOSGA025020-PA

Length

4508

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:561478..565985

Sequence Coding Region

561478..561514,561913..562143,562504..562839,563212..563559,563922..564797
,564926..565007,565089..565158,565373..565558,565664..565724
,565819..565985

Genome Context

<gbrowseImage1> name=IndicaChromosome07:561478..565985 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:561478..565985 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGCCGGACGCTCCCGCCGCTCCTGCTCCAGTGGAGGGGGAGCCAAAGGGGAAGAAATCCAAGTCAAACAAAGGAAATAAGCATAAGCAGCAGGATTCCCTTTCTGCTGTATCCGATGCCAGTGCTGTTGTGACGCATACAGATTTGCCTGATGAATCTGGAAATGGTTGCACGAGCGGGGAAGGTGCCACCACCTCCACAGCGCCGGCGCTAGAGGCAGAGAAGGTGGACAAGCGGGAGGCTCCTGCTGCATCTGCTTCAGTGGAGGGGACGCAAAAGGGGAAGAAATCAAAGGACAAGAAACGAAAGAAGCATAAGCAGCAGGGTTCCCCATCTGCTGTATCCGATGCCAGTGCTGTCGTGACGGATACAGATTTGGCCAATGAATCTGGAAACGGTTGCACGCATGGGGAAGGTGTATTACGAGATGCTGATGTTGCGAGTTCCAGAAGTGGCAATGATCTAACACCGGATGTGGATCGAACGCTGGGGAAGAGCAAGGCGTCGAAACGGCAATGCGATGCCACCACGTCCACAGCAGCAGCGCCGGAGGCAGAGGAGATGGACGAGCGGGAGGCTCCTGCTGCTTCTGCTTCAGTGGAGGGGACACGAAAGGGGACACGAAAGGGGACGAAATCAAAGGACAAGAAACGGAAGAAGCATAAGCAGCAGGAATCTCCTTCTGCTGTATCCGATGCCAGTGCTGTTGTGACGGATACAGATTTGTCTAATGAACCTGGAAATGGTTGCACGAGTGGGGAAGGCGCATTACGAGCTGATGATGTTGTTGCGAGTAGTGGGCATGATCCAACACCAGAAATGGATCGAACGCCGGGAAAGAGCAAGACATTGAAACAGCGGCGTGGCGGTGCCATCTCCACGCTTGCGGTTCCGGAGGGGGATAAGGAGGTGGATGAGCAGGAGGCTCCTGGCGCCTCTGCTTCAGTGGAGGGGGCGGCACCAAAAGGGAAGAAATCAAAGTCAAAAAAACAAAAGAAGCAATCCCCTTCTGCTGTATCTGATGCCAGTGCTGTTGTGATGGACACAGATTTGGCCAATGAATCTGGAGGTGGTTGCAGGGGTGGGGAAGGTGCATTACAAGATGCTGATGTTGTTGCGATTCCCAGAGATGGGCAAGAACCAAAATGTCCTGAGGTAAACAGTGCTGAAGATTTGGTGGCAGGAAAGAAAGGGAATAAGGATAATAACTCCCAGCTCTGCAGCTCGTTGCATGAGAGTTCTATAGAAAGAAAAAGGAGAAAGAATAGAGATAGGCGGAGGAGAAAGAAGGAAAATGCCAATAGAAGGAGCAATGTGCAGAATCCTTCTTTGCTACCTGGTGCTGGTGAGGTTGTCTCGGTGGCAACAGCTGACATGAATAATACTCCTGGCTCTAAATGCAAGAATCCTTCGCAACCTGTTGCTGACGAGGTTGGATTGGTGATGACAGCTGATGGAAATATTTCTCTAGGCTCTGAATGCAAGAAATCAAACAAAAAGATGAAGAGAAATCAAACAAGTGTTCCTGAGGCACCCTCGGTGCAAAGGATGGATTTGGGTGAGACTGCTTCGGTTGGAGTGATGGATGGTGAATGTGAAGTTCAAGCTGTCTTATCCGATTGCCAAAGTGCAAGGAGCGATAGATCAAATATAGCTCAGGCACACAAAGAGAATTTTCGGCACATCTACTCACCAAGAGGATCATTGATAAGATTTCGAAGGAAAAAACTTCTTATTCTAGATATTAATGGTTTGCTTGCGGATATCAATCAGGACCACCACAATGCTCACCTGTCACATGCAAAGGTTCGGGGAAAATTAGTCTTCACAAGACCCTACTGTGATGATTTTCTGAGATTTTGCTTCGAGAACTTTGAGCTAGGGATATGGTCATCGAGATTGAAAGCAAATGTGGATTCGGTTGTAAATATCATTATGAAGAAGGATATGAAACAGTCCCTATTATTCTGTTGGGACATGTCGAAATGCACTGGTACTGGGTTTAAAACTCTTGAAAACAAAAACAAACCATTAGTACTGAAGGAGCTAAAGAAACTGTGGAATAAAGAGGATCCTGATCTTCCATGGGAGCAAGAAGAGTTTTCACCTTCAAATACATTACTTGTGGATGATTCCCCTTACAAGGCTCTGGGCAATCCGCCACACACTGCCATTTTTCCTCACCCCTACAGCTATCTTAACAAGAAAGATGATTCATTGGGACCAGGTGGAGATCTTCGGGTGTATCTGGAGAACCTTGCTACTGCAGATGATGTTCAGCGCTATGTACAGGAGCACCCATTCGGTCAACCTTCCATTACAAAGAGTGATCGACATTGGAATTTCTATGTGAAAATACTTGATAAACTGGAGAAGCCCTTTGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MDEPDAPAAPAPVEGEPKGKKSKSNKGNKHKQQDSLSAVSDASAVVTHTDLPDESGNGCTSGEGATTSTAPALEAEKVDKREAPAASASVEGTQKGKKSKDKKRKKHKQQGSPSAVSDASAVVTDTDLANESGNGCTHGEGVLRDADVASSRSGNDLTPDVDRTLGKSKASKRQCDATTSTAAAPEAEEMDEREAPAASASVEGTRKGTRKGTKSKDKKRKKHKQQESPSAVSDASAVVTDTDLSNEPGNGCTSGEGALRADDVVASSGHDPTPEMDRTPGKSKTLKQRRGGAISTLAVPEGDKEVDEQEAPGASASVEGAAPKGKKSKSKKQKKQSPSAVSDASAVVMDTDLANESGGGCRGGEGALQDADVVAIPRDGQEPKCPEVNSAEDLVAGKKGNKDNNSQLCSSLHESSIERKRRKNRDRRRRKKENANRRSNVQNPSLLPGAGEVVSVATADMNNTPGSKCKNPSQPVADEVGLVMTADGNISLGSECKKSNKKMKRNQTSVPEAPSVQRMDLGETASVGVMDGECEVQAVLSDCQSARSDRSNIAQAHKENFRHIYSPRGSLIRFRRKKLLILDINGLLADINQDHHNAHLSHAKVRGKLVFTRPYCDDFLRFCFENFELGIWSSRLKANVDSVVNIIMKKDMKQSLLFCWDMSKCTGTGFKTLENKNKPLVLKELKKLWNKEDPDLPWEQEEFSPSNTLLVDDSPYKALGNPPHTAIFPHPYSYLNKKDDSLGPGGDLRVYLENLATADDVQRYVQEHPFGQPSITKSDRHWNFYVKILDKLEKPFA</aaseq>

Gene Sequence

<dnaseqindica>1..37#436..666#1027..1362#1735..2082#2445..3320#3449..3530#3612..3681#3896..4081#4187..4247#4342..4508#ATGGACGAGCCGGACGCTCCCGCCGCTCCTGCTCCAGGTACGGGCCCATGTCCTCCTCCTCCTCCTCCTCGCTGTAGGTCCCAACGGCTGGGCGCATGCGCGGGCTTTTGCCTTCCGAAAATAGGGTTAGGGTTTTATCTTACCCATGCGCGGCGATTCGAGAGCCCGCTTCTTGATTTCTTGCCTCTGATGATGCCATTCATTCGACTAGCCTAGCCTGTGGAGTTCATTTCTTGAACCGTAATTGGCTAATTGCATTTGCACAGGTTTCTTTCCAAGCAAATAGGAGTACTGCATTTGCACAACGCCCTAATGCCATAGTTTTAATTTCATTCACCAACCTACCAACTCAACCCTGCTGAAAATTCTGAGCATTGAATTGCATTGAGAAAGCACTAATCATGCTTATCGGTATTTGCTTTCACGCTTCTGCAGTGGAGGGGGAGCCAAAGGGGAAGAAATCCAAGTCAAACAAAGGAAATAAGCATAAGCAGCAGGATTCCCTTTCTGCTGTATCCGATGCCAGTGCTGTTGTGACGCATACAGATTTGCCTGATGAATCTGGAAATGGTTGCACGAGCGGGGAAGGTGCCACCACCTCCACAGCGCCGGCGCTAGAGGCAGAGAAGGTGGACAAGCGGGAGGCTCCTGCTGCATCTGCTTCAGGTACGGACCATCTCATCCTCGCTGTAGGTTGCTATGGCTGTGAGTATGCCTGGGGCTTTTGCCTATTGTTACAGCCTAGGTTTAACCACGCGCATCCATTTGAGAGCGCAGTTCTTGATCTCTTTCCTGTCATGCCATTGATTCCATGAACCCTTTGCGAGCTCAATTCTTGAACTGATATTGCATTTGCACCTATAAAAAAGTACTTCATTTCCACATTGCCCTGATGCCATAATTCTAATTGCATTTCGCCTACTTGCGCATCACACCCTAATGACACTCTCAATAGGGATATTTGTTCGAATTGCATTGAGCAAGCAGTAATCGTGCTTATCAGTATTTGCTTTGACACTTCTGCAGTGGAGGGGACGCAAAAGGGGAAGAAATCAAAGGACAAGAAACGAAAGAAGCATAAGCAGCAGGGTTCCCCATCTGCTGTATCCGATGCCAGTGCTGTCGTGACGGATACAGATTTGGCCAATGAATCTGGAAACGGTTGCACGCATGGGGAAGGTGTATTACGAGATGCTGATGTTGCGAGTTCCAGAAGTGGCAATGATCTAACACCGGATGTGGATCGAACGCTGGGGAAGAGCAAGGCGTCGAAACGGCAATGCGATGCCACCACGTCCACAGCAGCAGCGCCGGAGGCAGAGGAGATGGACGAGCGGGAGGCTCCTGCTGCTTCTGCTTCAGGTTCGGACCATATCCTCCTCGCTGTAGGTCGTAAAAGCTGTGCTCATGCCTAGGGGTTTTGCCTAAGTCTAGGGCCTTGACACCTAGGATTAGGGCTTATCGATGCATGGCCATTTGAGGGCCCAATTCTTGATTTCTTCCCTCTGATGCCATTGATTCGACGAGCCTTTGAAAGTACAATTCTTCAACTGATACTGCATTGTACAGATTTCTTTCAAAAGAAAAATACTGCATTTGCATAACGTCCTGATTCCATAGTTCAAATTGCATTTCGTCAACTCCACATGTTGAAATTCTGAGTAAGGTATTGGTTTTAATTGCGTTGAGAAAGAATTAATCATGCTTCTCGTATTTGCTTTGAATTTTCTGCAGTGGAGGGGACACGAAAGGGGACACGAAAGGGGACGAAATCAAAGGACAAGAAACGGAAGAAGCATAAGCAGCAGGAATCTCCTTCTGCTGTATCCGATGCCAGTGCTGTTGTGACGGATACAGATTTGTCTAATGAACCTGGAAATGGTTGCACGAGTGGGGAAGGCGCATTACGAGCTGATGATGTTGTTGCGAGTAGTGGGCATGATCCAACACCAGAAATGGATCGAACGCCGGGAAAGAGCAAGACATTGAAACAGCGGCGTGGCGGTGCCATCTCCACGCTTGCGGTTCCGGAGGGGGATAAGGAGGTGGATGAGCAGGAGGCTCCTGGCGCCTCTGCTTCAGGTATGGACCGTTCCCCCCTTGCTGTAGGTTGCAACAGCTGTGCGCGTGCCCAGGGCTTTTGCTGATGGCCACCTAGGGTTAAGCGGCTATTTGAGAGTCCAATTCTTGATTTCTTGCCTCTGATGCCATTGATTTAACGAGCCTTTGTGAGTTCAGAGTTCTTTCATGAACTGATATACCATCTGCACACATTTTTTTCAAAAGAAAAATGTTGCATCTACACAGCACCCTGATGCCTTGATTCTAATTGCATTTCACCAACTTGCTGACCATGTCCTCATGAATTCTGAATGTAGTCTTAGTTCAAATTGCGTCTAAAAAATTAATCATTCTTATCAGTATTTTCTTTGAGGCTTCTGCAGTGGAGGGGGCGGCACCAAAAGGGAAGAAATCAAAGTCAAAAAAACAAAAGAAGCAATCCCCTTCTGCTGTATCTGATGCCAGTGCTGTTGTGATGGACACAGATTTGGCCAATGAATCTGGAGGTGGTTGCAGGGGTGGGGAAGGTGCATTACAAGATGCTGATGTTGTTGCGATTCCCAGAGATGGGCAAGAACCAAAATGTCCTGAGGTAAACAGTGCTGAAGATTTGGTGGCAGGAAAGAAAGGGAATAAGGATAATAACTCCCAGCTCTGCAGCTCGTTGCATGAGAGTTCTATAGAAAGAAAAAGGAGAAAGAATAGAGATAGGCGGAGGAGAAAGAAGGAAAATGCCAATAGAAGGAGCAATGTGCAGAATCCTTCTTTGCTACCTGGTGCTGGTGAGGTTGTCTCGGTGGCAACAGCTGACATGAATAATACTCCTGGCTCTAAATGCAAGAATCCTTCGCAACCTGTTGCTGACGAGGTTGGATTGGTGATGACAGCTGATGGAAATATTTCTCTAGGCTCTGAATGCAAGAAATCAAACAAAAAGATGAAGAGAAATCAAACAAGTGTTCCTGAGGCACCCTCGGTGCAAAGGATGGATTTGGGTGAGACTGCTTCGGTTGGAGTGATGGATGGTGAATGTGAAGTTCAAGCTGTCTTATCCGATTGCCAAAGTGCAAGGAGCGATAGATCAAATATAGCTCAGGCACACAAAGAGAATTTTCGGCACATCTACTCACCAAGAGGATCATTGATAAGATTTCGAAGGAAAAAACTTCTTATTCTAGATATTAATGGTTTGCTTGCGGATATCAATCAGGACCACCACAATGCTCACCTGTCACATGCAAAGGTTCGGGGAAAATTAGGTAAGGTTGCTTATTTAATACTTGATACACAATTATATTTGTACACATACTAGTGTTCTCTGTAAATAAAGGACCAACATATCAAATACAATATACTAATTTGCAATGGCTTATCGTTTGTGTGCCAGTCTTCACAAGACCCTACTGTGATGATTTTCTGAGATTTTGCTTCGAGAACTTTGAGCTAGGGATATGGTCATCGAGATTGAAGTACTAATTCCTCTCCCCTACATCTCTTGTTTTTGCTAGAGTTTCTTGCATGGTGTTAATGACAACATTCTTATTCTGCAGAGCAAATGTGGATTCGGTTGTAAATATCATTATGAAGAAGGATATGAAACAGTCCCTATTATTCTGTTGGGTAAGTTGCAGAAAAGTATGCATAGTTGCTACAGCCTACAACTAAATTCATGGTTTCTGCCTAGCTAGTAATTGAAAGAAGGCCAAGTGGTTGTTGAAAAACTCCAAATTTTATGCTACTGTATTTTTTTTTTGTTTTAGTACTCTTGTTTCTTTTCTTTTTCTGTAGCTTTGGTTGCAAGTCAGGTCCTAATGCACACACTATAATTTGCCAGGACATGTCGAAATGCACTGGTACTGGGTTTAAAACTCTTGAAAACAAAAACAAACCATTAGTACTGAAGGAGCTAAAGAAACTGTGGAATAAAGAGGATCCTGATCTTCCATGGGAGCAAGAAGAGTTTTCACCTTCAAATACATTACTTGTGGATGATTCCCCTTACAAGGCTCTGGGCAATCCGGTACTGACTTCACCCCTGTTCCTATGCAATTTATATCTGTTGTGATAAGATCAAGTTGTTGTAATTCGCACGCATTATTCTTCTCCTGATATATGTATTTTGCAGCCACACACTGCCATTTTTCCTCACCCCTACAGCTATCTTAACAAGAAAGATGATTCATTGGGTATGCTCCATTATTTCAAGATCTATTTAAGTATTTATTTCTTATAATTGGTGCTCCAAAATGGTTAGTGTTGATGCCAATTTTCCATGAGCAGGACCAGGTGGAGATCTTCGGGTGTATCTGGAGAACCTTGCTACTGCAGATGATGTTCAGCGCTATGTACAGGAGCACCCATTCGGTCAACCTTCCATTACAAAGAGTGATCGACATTGGAATTTCTATGTGAAAATACTTGATAAACTGGAGAAGCCCTTTGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025020