BGIOSGA025066

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Revision as of 06:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025066| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025066, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA025066

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025066, complete gene.

LocusTag

OSJNBA0057M23.121

Ensembl Transcript ID

BGIOSGA025066-TA

Ensembl Protein ID

BGIOSGA025066-PA

Length

5177

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1235070..1240246

Sequence Coding Region

1235070..1236418,1238695..1240246

Genome Context

<gbrowseImage1> name=IndicaChromosome07:1235070..1240246 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:1235070..1240246 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGAAGTAGTTGCTTCTGCGGTAGTTGGCGAGGCTGTGAGCAGGGTCTCCACCTTCTTCGTCGACAAGCATAAACGGAAACTAAGTGAGGAAGATGGCCTGGAGAGGCTGGAGATGGCACACATCAGAATGGAGGCCGCTCTGGAGATGTCCGGAAAGTGGCCGCCGGTCACAGATGCCTCGCTGCTGCGTTGGAGGAAGAAGCTGAAGTGCGCCTCCGAAGAGTGCAGCCAAGTCATGAACAGATGCAAGCGTCGCGCCATGGAAGACGATGAGATGGAGCAGCAGATCAGGCGATGCTCTTTCCCCAGACGGATCGCCCATGAGACAAGATCATTCTTCTCCTCTTTCTCCGGCGACAAGAATGTTGATAGCCTAATCACAACCTCGACCATTCAGAGGTTTGAAAGGTTTGCTGATGGCGCCGGTGAGTTCCTGAGATTCTTGCAGTTCGGCAGCATAGGCAGCATCAACTACATGCTCGTTGATCCTCTCACAGGTCCCCTTCTTGCCGGCAAAGCTCTGCAGTTTGAAAATCCTCCTGGAATAAGTGGGTACTACCTAGCGGCACGGCCACTACGATTTGCAGAGCGAGGAGTAGTAGCCTGTGTGTTTCTTCAGTACAAGAACCATGAGAGGCCAGAGGAAAACTTCCTCCTCGGAATTTTGATACGGGTGACAGCAAGCACGAATGTGGTCGGGATTATGGCCAGGTGCTCGGAGAAGCTTACCTCCAATTTCAAGCCTGTTACTGAAGCTGTGAGGCAAGAGCTCGCTCAGTTCCACCAGCGAGGCTTCTACTGCTTCCCGTTTGTTGCTTCTACTGATCCAGAGTACTCGAGAATCCACCAATCCGAAACTCACCGTGCTCGCCCAAACCCGGCATGCTGCGAAGAAGAACACGAGCACCATGGTCGCCGCAGAAGCAGTGACATGGTTGAGCCGTTAGGTGCATTCCCGGAGCCGGTGATCAAATTGGTCGTGCAACGCCATGTCTCTGCTACACGACACAAGAGAACATCGTCTTCTTCATCATATTCATGTTCATGTGGTCATGCCAACATGGGTTGCTCGGGGCCGACTCTGCTGCAGGTGACGGCCGTCTTCGCGCCGCACGCCTCGCCGGAGGAGCTGCCGTCCGGAGCCAAGAGCGTCGCCGTCGTGGCGATCGACGGGAGGGAGGAGCAAGCGGTGCGCACTAACGTTGGATGGCGTGAGATGGAGGAGCTGCTGCCGAACGCCGTCGATCGCCTGTGCCACGAGGCTGCGGCGCATGAGGTGTTCTGGAGATCCGGCCATGGCGTCGCCTACCTGTGCGTGGAGAAGATGGGCACGGAGATGGCAAGATCAGGGAGGCTAATCTCGCAGCTGAAGATGGGAGAGATAGTCAGTTATGCGGTCGTTCATGAGACAGTGAACAAAATCATATCTGGGTTGGTTGACAAGTATGAGCGAAAATCAAGTGCGGAGGAGCAGATGGAGAGGCTGGAGATGGCGCAAATCAAGTTGGAGATTGCTCTTGAGACATCCAATAAGTGGCAGATCACTAGTGGGCCGTTATTACGGTGGCAGAAGAAGCTAAAGCGTGCTGCTGAAGAGTGTGATGACACATTACGCAAGTGTAGGCAGCGTGTCGAGGAAGAAGAGGAGGTGGAACAGCAAGTAAGGAATTCATCCTTTCCTAAGCGAATTGCCCATGCCACCAAGTCAATGATATCATCCATCTTTCACGGCAATATCGACGAGCCAACTGTATCTTCTGTTCGAAGATTCGAGTGGTTTGCAGAAGGAGCTAATGACTTTCTGAGGTCTGTGGAGTTTGGAGGGACACCACATCGTTACTCATTCTTCGACCCCCTTATTGGGCACCTTCTTGCAGGTGAAACTCTAGAGTACAAATCGGTGCAGGGAAACAAGCAGCATTTGTTTTGGATACGGCCCAACAACATTTCAGAGCGAAGAGTAGAAGCTAAGTTGATATTTATTTACAATGATTGCAGTGCACCTGAGGATAACTTTTTTCTTGGTATGATGCTGCAGCTTTCAGAGAGTACAAACATAGTTGGCACTACAATTAGGTGCTTGCAGTTGTTTAGCCCTTATTTCAGTTCTTCTACAACTGAAGCTGTTAGGAAAGAACTTACTCAGCTACCTACACAAGACTTCTCCTGGGTGCCACGTTCTCGTTCAGTTCATTGGGACAGCATTCACAGAGTAGCTACTGAGTGGTTCCGCCCAAACCCACTGTGTTGCAAGCATGGTCATAAGGTATGTAGTAGTGGCTACATGGACAAGATAGAATTTTGTGATGTTTCTCTAGAACCAGTCATTGAAGTGTATTTGGAGAGCCAAATCTTCCAATATAGTTGCAACAAACAGAGGGCAGATGTACAAGGAAAAATATGTTCTCCCAGAAGACCATCATATCTGAAACTTGGAGTATTCCTTTTGCCTCATGTTTCTTCAACCGACCTTCTGCCTGCCACTGAGAGTTTTGCAGTAGAGGTGATCAATGGTGAGGAGCAGCTTTACTGTCACAAAAATGTTACACTGGAAAAGCTTAACAGGATAATGCTACCAAAAGCAATAGATAGCTTCAATCAGAATGCAGAAGTGACAGCGCATCAGTTGCTGTGGAAGTCAAAGCATGAAGCTGCATTCTTTCATGTGTGGAACACAAGAATGAATATGTCAAGCATATTGAGTACTGCTAGGAAATCAACGTTGTTGCAACAACATGATCACCTTGAACTGGAGAGCCGAGCAGATGTGATCTCTGAGTTTCTCAAGCTGTGGGTTGATCGTGCTCCTGTCATGATGCAGTTCGCAGCTGTGGACTGGATTCAGGCCCTACTTGGGGAAGCTGGAGATTCTAAAAAGTTGCTGATGAGCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MSEVVASAVVGEAVSRVSTFFVDKHKRKLSEEDGLERLEMAHIRMEAALEMSGKWPPVTDASLLRWRKKLKCASEECSQVMNRCKRRAMEDDEMEQQIRRCSFPRRIAHETRSFFSSFSGDKNVDSLITTSTIQRFERFADGAGEFLRFLQFGSIGSINYMLVDPLTGPLLAGKALQFENPPGISGYYLAARPLRFAERGVVACVFLQYKNHERPEENFLLGILIRVTASTNVVGIMARCSEKLTSNFKPVTEAVRQELAQFHQRGFYCFPFVASTDPEYSRIHQSETHRARPNPACCEEEHEHHGRRRSSDMVEPLGAFPEPVIKLVVQRHVSATRHKRTSSSSSYSCSCGHANMGCSGPTLLQVTAVFAPHASPEELPSGAKSVAVVAIDGREEQAVRTNVGWREMEELLPNAVDRLCHEAAAHEVFWRSGHGVAYLCVEKMGTEMARSGRLISQLKMGEIVSYAVVHETVNKIISGLVDKYERKSSAEEQMERLEMAQIKLEIALETSNKWQITSGPLLRWQKKLKRAAEECDDTLRKCRQRVEEEEEVEQQVRNSSFPKRIAHATKSMISSIFHGNIDEPTVSSVRRFEWFAEGANDFLRSVEFGGTPHRYSFFDPLIGHLLAGETLEYKSVQGNKQHLFWIRPNNISERRVEAKLIFIYNDCSAPEDNFFLGMMLQLSESTNIVGTTIRCLQLFSPYFSSSTTEAVRKELTQLPTQDFSWVPRSRSVHWDSIHRVATEWFRPNPLCCKHGHKVCSSGYMDKIEFCDVSLEPVIEVYLESQIFQYSCNKQRADVQGKICSPRRPSYLKLGVFLLPHVSSTDLLPATESFAVEVINGEEQLYCHKNVTLEKLNRIMLPKAIDSFNQNAEVTAHQLLWKSKHEAAFFHVWNTRMNMSSILSTARKSTLLQQHDHLELESRADVISEFLKLWVDRAPVMMQFAAVDWIQALLGEAGDSKKLLMSM</aaseq>

Gene Sequence

<dnaseqindica>1..1349#3626..5177#ATGTCTGAAGTAGTTGCTTCTGCGGTAGTTGGCGAGGCTGTGAGCAGGGTCTCCACCTTCTTCGTCGACAAGCATAAACGGAAACTAAGTGAGGAAGATGGCCTGGAGAGGCTGGAGATGGCACACATCAGAATGGAGGCCGCTCTGGAGATGTCCGGAAAGTGGCCGCCGGTCACAGATGCCTCGCTGCTGCGTTGGAGGAAGAAGCTGAAGTGCGCCTCCGAAGAGTGCAGCCAAGTCATGAACAGATGCAAGCGTCGCGCCATGGAAGACGATGAGATGGAGCAGCAGATCAGGCGATGCTCTTTCCCCAGACGGATCGCCCATGAGACAAGATCATTCTTCTCCTCTTTCTCCGGCGACAAGAATGTTGATAGCCTAATCACAACCTCGACCATTCAGAGGTTTGAAAGGTTTGCTGATGGCGCCGGTGAGTTCCTGAGATTCTTGCAGTTCGGCAGCATAGGCAGCATCAACTACATGCTCGTTGATCCTCTCACAGGTCCCCTTCTTGCCGGCAAAGCTCTGCAGTTTGAAAATCCTCCTGGAATAAGTGGGTACTACCTAGCGGCACGGCCACTACGATTTGCAGAGCGAGGAGTAGTAGCCTGTGTGTTTCTTCAGTACAAGAACCATGAGAGGCCAGAGGAAAACTTCCTCCTCGGAATTTTGATACGGGTGACAGCAAGCACGAATGTGGTCGGGATTATGGCCAGGTGCTCGGAGAAGCTTACCTCCAATTTCAAGCCTGTTACTGAAGCTGTGAGGCAAGAGCTCGCTCAGTTCCACCAGCGAGGCTTCTACTGCTTCCCGTTTGTTGCTTCTACTGATCCAGAGTACTCGAGAATCCACCAATCCGAAACTCACCGTGCTCGCCCAAACCCGGCATGCTGCGAAGAAGAACACGAGCACCATGGTCGCCGCAGAAGCAGTGACATGGTTGAGCCGTTAGGTGCATTCCCGGAGCCGGTGATCAAATTGGTCGTGCAACGCCATGTCTCTGCTACACGACACAAGAGAACATCGTCTTCTTCATCATATTCATGTTCATGTGGTCATGCCAACATGGGTTGCTCGGGGCCGACTCTGCTGCAGGTGACGGCCGTCTTCGCGCCGCACGCCTCGCCGGAGGAGCTGCCGTCCGGAGCCAAGAGCGTCGCCGTCGTGGCGATCGACGGGAGGGAGGAGCAAGCGGTGCGCACTAACGTTGGATGGCGTGAGATGGAGGAGCTGCTGCCGAACGCCGTCGATCGCCTGTGCCACGAGGCTGCGGCGCATGAGGTGTTCTGGAGATCCGGCCATGGCGTCGCCTACCTGTGCGTGGAGAAGATGGGCACGGAGATGGCAAGGTGCAGGCCGACTCAATGGCGGGTGTAAAGGTAGACGACGGTGGCCTCAAGCCCTGAATGAGTAACGTTTTTGCAACGACATGACCTTGAGCTGGAGAGCCAAGCAGCTGTGATCTCTGAATTTCTAGAGTTGTGGGTTCAGGGTAGTCCTATCCTGATGCAATTCTCAGTGGTGGACTGGATTCAGGCCCTATTTGGCTTTTTCTCGAACGCGCAAAAGGATTGCACGTTAATATATTAGAAGATAAGAATATTCGATACACAACGCATTAAGCCAGACCGACTTATGCCAAGAGAGGAGGGAGGCCCTACTTGGTGGAGATTCTGAAAAGAGCAATTCTACGGTCCTTAAGGAGGTACCATGAGGTACCAAAATTTTAGTGTAAAATTTGGTACATCATAGTACCTAGATACCAAGAGGTACCAAATTTATAATAGAAAAAATGGTACCTCATAGTACCTACTCAAGAACCATAAAATTGCTCTGGTATGTAAATATGAGCTCAACATGGTGTTGAAGCTTTGATGTGTAATCGGTCATTTTGTCTGAATTTTGCATGCCTCACCCTGTTTCCTTTTAGTATTTCAGATCTCCAAGCAACTTGTCTTTTTATTATGCTATTTGTTAGGTGATGATCAGACAGCAATTTCATGAGAATTCTTCAAGCACGACAAAGGTTTTACATGGTCCAGCTAGTCTCCATTTGATCAAAGAGTTTAAGATACTGGAGACTTGATTATTCCCATCATGATCATCTGCTGGCAAATGAACCGAATCAAACAGCCTAACATAGAACTAGCATCTCGTAATGCTGCTTCTGTAGGATCGAGGAAGGCTGTGTTAGTTCCGAGAAGAAAGGGGAAGAAAAACTTTGTTTTTTTTTTCATGTTTTCCAAATTGCTTAATGGTGTATTTTTTAAAAAAAAATCTATATAAAAGTTGTTTAAAAAATCATATTAATATTTTTAAATAATTAATACTCAATTAATCAATCGCTAATGACTTGTATCATTTGGTGTATATTTTCCTCTCCTGAGACACATCCGAAGGAAGGAGACATATGGTGTAGACGAATGGGTTGTGCATTCGGCCCAACTGGTAGTGAAAGTACATCCTAGGGCGGCTCAAGAAGCCCATGAGTTAGTGGGCTTAAATTTGGGCTTCAGTGGACTGGGCCGAGCTATCACTAATTCACTATCACTTGGGCCGCACCAAAGCCCTTCGTCTCTCCACTCTCCACTCCGACCACCACGGCAACCACCGCCGTCCACCGCGCGAGCAGGCCTCCGCCGCCGCCGCGGACGAACGATCCAGGCGAGGCCATGCCGGCGCAAGGTGGTCCGGGGGAATGGCGTTGCCTTCCTCGATCCGCTGCTGCTGCTGCCAGCCTGCCACTGTGGGGGCGGCCATTTGTGCGTGCTCGTGCGGCGAGAGCCCGGCGATGCGGAGAGGAGGAGGCCAGCTTCTTCCTCGCGGCGGCCACGGCGAGGCGCGTTGAGATCGAGGTACGGCTAGGTTTCATCGCATCCCGCGATCTGTTTCGTCCAGCTTAATTTGTTGCTGTTCTGTTTAGGGGATAGGTTAGTCCACTGCACAAGCAACGTGTCGCAGATAATTCGTAGTCGCCAATAATGATTTTTTCAGACCAAAAGACGACTTCAAGTCGCCGATAATATAGTTATCGAATTCCCAGATCCCTACCAGTCAACACAAGTAAGCCGGAACTGATTTCACTAGGATTTTTTTTTTTAGGAAAAGGATCGCAGTGACGGCCTGACGGGGACAATTTTTCTTCAATAACTAGCCACGCTGCAAGATTGGACAGTCAATGAGAGCTTTCTTTTAGGAAAAGGATCGCAGTGACGAGGACAGTTTTTCTTCAATAACTAGCCACGCTGCAAGATTGAACAGTCAATGAGAGCAGTGTGCTCTCAACTTTCAACAGGTGTGGTATTAGACCATACATTCAACAAGACCCGCCTAACTTCCATGAGAGCCCAGCTTTGCTTTGCTCGTATTTTCTCCCCAAAGTCATCAACTTTGATGCTCACCATTCATTCAATCTAGTTATTATCTGCTGGGTACTCTCTGGTCGCACCTGCGTGGCTTCGATTTACTTGCGACTAATTCAACTCAGATTCTCTGAAGGTTGTGCTTTACATATTTCAACGATGCGATATTGCGCTTTGCTAGTTCTTATCAGAAATTCTCTCATCTATCTTTTGATTTTAATGGGCATCATGGTTGATGTTTCGATATATCTTGCTCTATGCAGATCAGGGAGGCTAATCTCGCAGCTGAAGATGGGAGAGATAGTCAGTTATGCGGTCGTTCATGAGACAGTGAACAAAATCATATCTGGGTTGGTTGACAAGTATGAGCGAAAATCAAGTGCGGAGGAGCAGATGGAGAGGCTGGAGATGGCGCAAATCAAGTTGGAGATTGCTCTTGAGACATCCAATAAGTGGCAGATCACTAGTGGGCCGTTATTACGGTGGCAGAAGAAGCTAAAGCGTGCTGCTGAAGAGTGTGATGACACATTACGCAAGTGTAGGCAGCGTGTCGAGGAAGAAGAGGAGGTGGAACAGCAAGTAAGGAATTCATCCTTTCCTAAGCGAATTGCCCATGCCACCAAGTCAATGATATCATCCATCTTTCACGGCAATATCGACGAGCCAACTGTATCTTCTGTTCGAAGATTCGAGTGGTTTGCAGAAGGAGCTAATGACTTTCTGAGGTCTGTGGAGTTTGGAGGGACACCACATCGTTACTCATTCTTCGACCCCCTTATTGGGCACCTTCTTGCAGGTGAAACTCTAGAGTACAAATCGGTGCAGGGAAACAAGCAGCATTTGTTTTGGATACGGCCCAACAACATTTCAGAGCGAAGAGTAGAAGCTAAGTTGATATTTATTTACAATGATTGCAGTGCACCTGAGGATAACTTTTTTCTTGGTATGATGCTGCAGCTTTCAGAGAGTACAAACATAGTTGGCACTACAATTAGGTGCTTGCAGTTGTTTAGCCCTTATTTCAGTTCTTCTACAACTGAAGCTGTTAGGAAAGAACTTACTCAGCTACCTACACAAGACTTCTCCTGGGTGCCACGTTCTCGTTCAGTTCATTGGGACAGCATTCACAGAGTAGCTACTGAGTGGTTCCGCCCAAACCCACTGTGTTGCAAGCATGGTCATAAGGTATGTAGTAGTGGCTACATGGACAAGATAGAATTTTGTGATGTTTCTCTAGAACCAGTCATTGAAGTGTATTTGGAGAGCCAAATCTTCCAATATAGTTGCAACAAACAGAGGGCAGATGTACAAGGAAAAATATGTTCTCCCAGAAGACCATCATATCTGAAACTTGGAGTATTCCTTTTGCCTCATGTTTCTTCAACCGACCTTCTGCCTGCCACTGAGAGTTTTGCAGTAGAGGTGATCAATGGTGAGGAGCAGCTTTACTGTCACAAAAATGTTACACTGGAAAAGCTTAACAGGATAATGCTACCAAAAGCAATAGATAGCTTCAATCAGAATGCAGAAGTGACAGCGCATCAGTTGCTGTGGAAGTCAAAGCATGAAGCTGCATTCTTTCATGTGTGGAACACAAGAATGAATATGTCAAGCATATTGAGTACTGCTAGGAAATCAACGTTGTTGCAACAACATGATCACCTTGAACTGGAGAGCCGAGCAGATGTGATCTCTGAGTTTCTCAAGCTGTGGGTTGATCGTGCTCCTGTCATGATGCAGTTCGCAGCTGTGGACTGGATTCAGGCCCTACTTGGGGAAGCTGGAGATTCTAAAAAGTTGCTGATGAGCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025066