BGIOSGA025136

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Revision as of 06:23, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025136| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025136, complete gene.| tag = OJ1343_...")
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Gene Name

BGIOSGA025136

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025136, complete gene.

LocusTag

OJ1343_B12.101

Ensembl Transcript ID

BGIOSGA025136-TA

Ensembl Protein ID

BGIOSGA025136-PA

Length

3411

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2222765..2226175

Sequence Coding Region

2222765..2223008,2224013..2224104,2224198..2224235,2224319..2224480,2224566..2224588
,2224897..2224968,2225074..2225241,2225452..2225534,2225646..2225708
,2225920..2225943,2225990..2226175

Genome Context

<gbrowseImage1> name=IndicaChromosome07:2222765..2226175 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:2222765..2226175 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGGACCCTGCAGGTCGCCGGTGGCTGCCTGGCGCCCCTCCTCCCCAGCCGACGAGCGGCGGCGGCGGTACGCCCGCCACGCGCGTCCGGGGCGTCGGCGTCGGCGGCGGCGGCGGCGGCGGCGGTGGAGGAGGACGGCAAGGTGAGGCTGGGTGGGTCGGACGTGGCGGTGACCAAGCTCGGCATCGGCGCCTGGTCCTGGGGCGACACCACCTACTGGAACGAGTTCCAGTGGGACGATAGGAAATTGAAGGCTGCTAAAGGAGCATTTGATGCGAGTGTCGATTGCGGAATAACCTTCTTTGATACTGCAGAAGTATATGGTGCAGGGATATCAGGAGCCATAAATTCAGAAAGTTTACTAGGAAGATTCATCAAGGAAAGGCAACAGAAAGAACAGGTCGAAGTAGCCATTGCGACAAAGTTTGCAGCCCTTCCGTGGAGGCTTGGCCGAGGAAGTGTTATTTCTGCACTGAAGGACTCGTTATCCCGCCTTGGCGTCTCCTCAGTTGAGCTCTACCAACTTCATTGGCCAGGGATATGGGGAAATGAAGGTTACCTTGATGGTCTTGGAGATGCTTATGAGCAAGGTCTTGTAAAAGCTGTTGGAGTCTCAAACTACAGCGAAAAGCGTCTACGGGATGCTTACGAGCGCCTCAAGAAGAGGGGAGTTCCACTTGCTTCAAACCAAGTAAACTACAGTTTGATATACAGGAACCCTGAAGAAAATGGGGTAAAAGCGGCTTGTGATGAGCTTGGTATTACTTTGATCGCATATTCCCCGATCGCTCAAGGTGTTCTGACAGGAAAATACACTCCAAATAATCCCCCAACTGGGCCCCGTGGACGAATATACACTCCTGAGTTCCTGACCAAGCTCCAACCACTTATTAACAGGATTAAAGAGATTGGAGGAAGTTATGAGAAGACCCCAACTCAGTGCACCAATTTCGATGACATAGTAGTGGTTCTGAACTGGCTGATCTGCCAAGGCAACGTTGTGCCGATCCCCGGAGCGAAGAACGCAGAGCAGGCCAGGGAGTTCGCTGGTGCGCTCGGGTGGAGCCTGACGGATCAGGAGGTGGAAGAACTGCGTTCCATGGCACGAGAGATCAAGCCGGTCATCGGATTCCCAGTAGAGAAGTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MAGTLQVAGGCLAPLLPSRRAAAAVRPPRASGASASAAAAAAAVEEDGKVRLGGSDVAVTKLGIGAWSWGDTTYWNEFQWDDRKLKAAKGAFDASVDCGITFFDTAEVYGAGISGAINSESLLGRFIKERQQKEQVEVAIATKFAALPWRLGRGSVISALKDSLSRLGVSSVELYQLHWPGIWGNEGYLDGLGDAYEQGLVKAVGVSNYSEKRLRDAYERLKKRGVPLASNQVNYSLIYRNPEENGVKAACDELGITLIAYSPIAQGVLTGKYTPNNPPTGPRGRIYTPEFLTKLQPLINRIKEIGGSYEKTPTQCTNFDDIVVVLNWLICQGNVVPIPGAKNAEQAREFAGALGWSLTDQEVEELRSMAREIKPVIGFPVEKL</aaseq>

Gene Sequence

<dnaseqindica>1..244#1249..1340#1434..1471#1555..1716#1802..1824#2133..2204#2310..2477#2688..2770#2882..2944#3156..3179#3226..3411#ATGGCCGGGACCCTGCAGGTCGCCGGTGGCTGCCTGGCGCCCCTCCTCCCCAGCCGACGAGCGGCGGCGGCGGTACGCCCGCCACGCGCGTCCGGGGCGTCGGCGTCGGCGGCGGCGGCGGCGGCGGCGGTGGAGGAGGACGGCAAGGTGAGGCTGGGTGGGTCGGACGTGGCGGTGACCAAGCTCGGCATCGGCGCCTGGTCCTGGGGCGACACCACCTACTGGAACGAGTTCCAGTGGGACGGTACGTTCGCCCAATGCGCATACTCATCGATTTGCTTATTAACTCTTGATTATTTTTGTGTTATTCCACCTGCAAACCTGCAATCGATCGGGATTGATTGACCAGTTCTTGATTTAGGATCTCAGTAGGAGAGTCTGGAGTCCGGACTCCACCTAATATGTTGATTTTGGGGGAATTGTTGGGATTGATTCCACTCATTGTGTTGTAGAGTTTCATGTAGCTGATGAGCTAGCTTTCAGGTTCAAAGGGGTCATAGTTTTAACCTGTACTAAGGGCTAAGTAGTAATTAAGGCTGTCTAACTGAGGTTTGTAAACTTACTAACCTTGAACTAACAGTGTAGTACTATTTGCAATTGATTTCTGTCCCAAGGTAACTGTAAGTGGTGGTATCATTAAGACATGAACATCCTGGGGCCTAGTCTAAGTAAACATTGCATTGCAATTATGACACTAGACTAAACGTCAAATATTTATGGTCAGGGGGAGTATGAGTTAAGGGGTCAGGTCTCTAGGTGAATCTTTGATCATGAACATGCTCATGGATTTGTTCTCTCTGCTTGTCCTAATGTTGTTGCAACTCGCAACGTTCGAACTAATTACAGATTGTGGAATTTAAGCAACTCGCATTGGAATGTTTTGAGTCTGATTTTTGTATAGTTTGGAAGGCACCAGCCATCTAAGGATGTAGGATCTGAAAGTGTGATATTTAACAAAGTTGTCTTTCTTTTTTGCATTCCTTTTTTCCTGCTACTTGTTATTTGTTTGTTGGGCTGAAATCAGGGTCATACATCCCATGTGCTTGATGTGCATGTTGCATTATCTGCAAGAAACCACGTGCCACATGTAATATGCTTTGCGAAATTTTAACGACCAAACACATGAAATGTCATAAATCTCTGCAATTGTTAGTGAAGTAGACAATTTGCTTAATGTCAATGACAATCCAATGACAAAGATACCAGTGACAGTCCCTTAATATGATGAAGCACTCTGAAATTTGCCAGATAGGAAATTGAAGGCTGCTAAAGGAGCATTTGATGCGAGTGTCGATTGCGGAATAACCTTCTTTGATACTGCAGAAGTATATGGTGCAGGGGTAAGAACCAACCCTGTTCATAGTTTCTGATCATTCTCTGGTTCATTTGAAGGAAAGATCTAACACTGCATTTTGGTTATGGATGTTCTGAAGATATCAGGAGCCATAAATTCAGAAAGTTTACTAGGAAGGTATACAATGTACAACTGTTTGTTGTTCCAAATATATGACGATTTTAGCACAAAATTTGTTCTAAGTTCTCATTTACCATCAGATTCATCAAGGAAAGGCAACAGAAAGAACAGGTCGAAGTAGCCATTGCGACAAAGTTTGCAGCCCTTCCGTGGAGGCTTGGCCGAGGAAGTGTTATTTCTGCACTGAAGGACTCGTTATCCCGCCTTGGCGTCTCCTCAGTTGAGCTCTACCAACTTCATTGGTTGTCTCATTGTCTTTTCACTCCAATATTATGTGTTTATTATTGTTGCTAGTTTATTTAACTGGTGTCATCATCTCCTTTTCAGGCCAGGGATATGGGGAAATGAAGGTATTCTTTAATATACCCATATTTAAATACTCCCTCCACTTTTTAATATATGCTGTTGATTTTTGCATATATGTCTGACCAGTGCAAATATGCAAAAATAAGTTATGCTTAAAGTATGTTTAATGATAAAACAAATGACAACAAACTAAATGGTAATTATATGAATTTTTGAATAAGATGGTTTGTCAACCATATGTTTAAAATTCAACTGCATCATATATTAAAATATGGAGGAAATACATAATAGAAATATTTGAACTGTACTCAGGAAGCAGTGGGAGCAATTACATTGTTCTTACATGATTCAGGTTACCTTGATGGTCTTGGAGATGCTTATGAGCAAGGTCTTGTAAAAGCTGTTGGAGTCTCAAACTACAGCGGTTGTAATCTGACTTCAAGAGTTACATATGATGCAGTTTGTTGTGCTAGTTACCTCTTTTCAGTGAAACTAATTTCAAGAACGCTCTTTCTATAATTTGATACAGAAAAGCGTCTACGGGATGCTTACGAGCGCCTCAAGAAGAGGGGAGTTCCACTTGCTTCAAACCAAGTAAACTACAGTTTGATATACAGGAACCCTGAAGAAAATGGGGTAAAAGCGGCTTGTGATGAGCTTGGTATTACTTTGATCGCATATTCCCCGATCGCTCAAGGTAGAATTCTGATTCTCTGATTCTGTTCTTCACATTACCATTCAACTATATCAAGATCTTTTTTTTGCAAGAAAAATGTTCAATCTAGTAGTTTAAATGAAAATGTCCTATCTTAGAACTGAAATGTTTACTTCATCGATCATCATTCCATTTCTCAAATGAGTGATTATCGAAAATAAAATCCTAGCTTAATATGTCTCCTCTGTTCAGGTGTTCTGACAGGAAAATACACTCCAAATAATCCCCCAACTGGGCCCCGTGGACGAATATACACTCCTGAGTTCCTGACCAAGGTTGTATTTTTTACTAATATTATTATGAGCTTGTTGCATCCTTGTTCACGAACCCTCTCCTATTGCACTGCTGCAACTCTGCTCATTGAAGATGTTTCTTATTCCAAACAGCTCCAACCACTTATTAACAGGATTAAAGAGATTGGAGGAAGTTATGAGAAGACCCCAACTCAGGTGTTCTTGCTGCTCAATATTTCCTTTTCTGAAGTCTACCCATTGCCAAAAACTTAGAATGCAAATTATTCAGACATAGGAGTAAATTGTAAGAGGGAAAAAATGATAATTTCATCTTTCAACAAGCTCAAGGGCTACCTGGAGATCAACAAGATCCCAAATGCTGAAGCTAAAACAACCACTAACACTTTGAATTCTCGGAAATTTGCAGTGCACCAATTTCGATGACATAGTAGTAAGCAAAGTTGCTCCATTCTTTTTTTCTCCTGCATTTTCTTCAGGTGGTTCTGAACTGGCTGATCTGCCAAGGCAACGTTGTGCCGATCCCCGGAGCGAAGAACGCAGAGCAGGCCAGGGAGTTCGCTGGTGCGCTCGGGTGGAGCCTGACGGATCAGGAGGTGGAAGAACTGCGTTCCATGGCACGAGAGATCAAGCCGGTCATCGGATTCCCAGTAGAGAAGTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025136

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025136&oldid=50730"