BGIOSGA025165

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Revision as of 06:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025165| Description = Japonica Group Os07g0152900 (Os07g0152900) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA025165, complete gene....")
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Gene Name

BGIOSGA025165

Description

Japonica Group Os07g0152900 (Os07g0152900) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA025165, complete gene.

LocusTag

NM_001065444.1

Ensembl Transcript ID

BGIOSGA025165-TA

Ensembl Protein ID

BGIOSGA025165-PA

Length

2737

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2767845..2770581

Sequence Coding Region

2767845..2767984,2768550..2768674,2768880..2768926,2769042..2769119,2769208..2769332
,2769486..2769552,2769636..2769698,2769858..2769927,2770012..2770112
,2770207..2770311,2770393..2770581

Genome Context

<gbrowseImage1> name=IndicaChromosome07:2767845..2770581 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:2767845..2770581 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGAGATCACCAATGTCACGGAGTACCAGGCCATCGCGAAGCAGAAGCTTCCGAAGATGATCTACGACTACTATGCATCTGGGGCCGAGGACGAGTGGACTCTCCAGGAGAACAGGGAGGCCTTCGCCAGGATCCTGTTTCGCCCACGCATACTGATCGACGTATCCAAGATTGACATGGCCACAACAGTCCTGGGGTTCAAGATTTCAATGCCCATTATGATTGCTCCCTCTGCCATGCAGAAGATGGCTCACCCAGATGGAGAGTATGCAACTGCGCGTGCTGCATCAGCAGCGGGCACTATAATGACATTGTCATCATGGGCTACTTCAAGCGTTGAGGAGGTTGCCTCAACTGGACCAGGGATTCGTTTCTTCCAGCTTTATGTTTACAAAGACAGGAGGGTGGTGGAGCAGCTTGTTAGGAGAGCTGAAAGGGCTGGATTCAAGGCGATTGCGCTTACGGTGGATACTCCGCGACTTGGCCGTAGGGAGGCTGACATCAAGAACAGGTTTGTTCTGCCACCATTTTTGACACTGAAGAACTTTGAAGGCCTGGAGCTGGGGAAAATGGACCAGGCTAGCGATTCAGGACTGGCTTCTTACGTCGCCGGGCAAATCGATCGCACCCTGAGCTGGAAGGATGTGAAGTGGCTGCAGACCATCACCACGCTGCCGATCCTGGTGAAGGGAGTGATCACTGCAGAAGACACGAGGCTCGCCGTGGAGAACGGCGCGGCCGGCATCATCGTGTCCAACCACGGCGCCCGCCAGCTGGACTACGTCCCGGCCACCATCAGCGCCCTCGAGGAGGTTGTGAAGGCGGCTCGCGGGCAGCTCCCCGTCTTCCTCGACGGCGGCGTCCGCCGCGGCACCGACGTCTTCAAGGCGCTCGCCCTCGGCGCCGCCGGCGTCTTCATCGGGAGGCCGGTGGTGTTCTCGCTGGCGGCGGCGGGGGAGGCCGGAGTCCGGAACGTGCTGCAGATGCTCCGCGACGAGTTCGAGCTCACCATGGCGCTCAGCGGCTGCACCTCCCTCGCCGACATCACCCGCAACCACGTCATCACCGAGGCCGACAAGCTCGGCGTCATGCCGTCTCGCTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MGEITNVTEYQAIAKQKLPKMIYDYYASGAEDEWTLQENREAFARILFRPRILIDVSKIDMATTVLGFKISMPIMIAPSAMQKMAHPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRRVVEQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLELGKMDQASDSGLASYVAGQIDRTLSWKDVKWLQTITTLPILVKGVITAEDTRLAVENGAAGIIVSNHGARQLDYVPATISALEEVVKAARGQLPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAAGEAGVRNVLQMLRDEFELTMALSGCTSLADITRNHVITEADKLGVMPSRL</aaseq>

Gene Sequence

<dnaseqindica>1..140#706..830#1036..1082#1198..1275#1364..1488#1642..1708#1792..1854#2014..2083#2168..2268#2363..2467#2549..2737#ATGGGGGAGATCACCAATGTCACGGAGTACCAGGCCATCGCGAAGCAGAAGCTTCCGAAGATGATCTACGACTACTATGCATCTGGGGCCGAGGACGAGTGGACTCTCCAGGAGAACAGGGAGGCCTTCGCCAGGATCCTGTAAGTATTCAATGTTCTTTTTTGCTATGTTACAGCTCCTGCCACTGTTACACTTTTGTGCATGGTTTTTTCTTGTGGGAGTGTATGTGAGAAGTGTAAAATAGCTGGGCCTTAAGTATTGTTTGGTAATCAGCCTTTAATACACATTTTTTGGGTAAATTTTACTTCCCTAATCCTTTTGGGGTAAATTTTTAGTGGTTATTTGTGAGCAATAACATGTTTGTTGATGCAGTTTTGGTTCTATGCTTGGTATAAATAATTGTTCTCTTATTATACTGAATTTTCTATTGTATTTGATTCACCTAACATAACATTATCGAAAAAATTAAAAAAAAAAGCCAGCATGTTCATCGTTCTTCGACAACTTTCATTTGTCATAGTTGATCCTGAAAATCCATTCTCATACCATACCATAACTAAATGTTTCATGTTGCTAGATACTGAAGAACAGATGTGGTTTTCCTGTTTATGTACAGTTGGTTGCTCAAATAATTTATCAGTACAAATTTTTGCAGCTTCATCATTAGTTCATTACCCATCTCCTCATATGTTCTGTTTTGGCCAGGTTTCGCCCACGCATACTGATCGACGTATCCAAGATTGACATGGCCACAACAGTCCTGGGGTTCAAGATTTCAATGCCCATTATGATTGCTCCCTCTGCCATGCAGAAGATGGCTCACCCAGATGGTATGCTTTTGTGAGATTTTCATTTGGTTTTGCTTAATCATGTTAGAGTAATAGAGCTATATGTCTAACACAAAAGGATATCATGTTAGAGTAATCCATAAATAACTGAAGCTGCTGAACTTTTCAAAGCAACATGTAAATTCTTTCTGCTTTGCCTACCATGTACAATAGAGCTAATATTGGTCCAATCTTTATATTGATTCAGGAGAGTATGCAACTGCGCGTGCTGCATCAGCAGCGGGCACTATAATGGTTGGTCGATGTTCCAATGGATCACAAATAGAATTCTACTTATGAAATTAATCAATCCAGTTAATGACACTGAAGTACTGAACACAACCTTGTGCCCTTTTTTTTTAATCTTCAGACATTGTCATCATGGGCTACTTCAAGCGTTGAGGAGGTTGCCTCAACTGGACCAGGGATTCGTTTCTTCCAGCTTTATGTAAACACACTACACAATCTCTGCTAATACTATTAGTTTCTTCGTTTGATTGTCCTTATCAAGGATCATGTACCTTGGATCTCTGTAGGTTTACAAAGACAGGAGGGTGGTGGAGCAGCTTGTTAGGAGAGCTGAAAGGGCTGGATTCAAGGCGATTGCGCTTACGGTGGATACTCCGCGACTTGGCCGTAGGGAGGCTGACATCAAGAACAGGTGCCCTCCATCTTTTCCATGGACTGAACACACCAGTTATATCTTCTGCATTACAAAAATGAGCATGGGAAGCATACACTGAAATGAGCAAACATAAGATCCCACATGTATCAGGATTTGAAACAAGCAGCCTGTCTGTGGATGTTGTTGCAGGTTTGTTCTGCCACCATTTTTGACACTGAAGAACTTTGAAGGCCTGGAGCTGGGGAAAATGGACCAGGTGAAACTCATCTCTCAGCACACATCGTGGACACCATGTTCCTCTAATCTCTCATGGAACTAATCTCCCATTCTGATGATCAGGCTAGCGATTCAGGACTGGCTTCTTACGTCGCCGGGCAAATCGATCGCACCCTGAGCTGGAAGGTAGCATCACGCCATTGCCAGTCCTGTTTATCTGCTTCTCTGATCGAATTTACTGACATGAAGATGACAATAGCTGCTTGATTACTTGTTCATCACTGTGATCAACTGATGAATCATATATCAAATGTTAAACAATGATGTGAATTATATTTTGTGCAGGATGTGAAGTGGCTGCAGACCATCACCACGCTGCCGATCCTGGTGAAGGGAGTGATCACTGCAGAAGACAGTAAAGCCATTGCCTCATCTCTACATTACATGCTCCGATCATTAACTCGAATGCAAAGCCACTGACAGTGTGATCGAATTGCAGCGAGGCTCGCCGTGGAGAACGGCGCGGCCGGCATCATCGTGTCCAACCACGGCGCCCGCCAGCTGGACTACGTCCCGGCCACCATCAGCGCCCTCGAGGAGGTACTCGATCATCTTCAACCTCGCATCGATGGTTTCTGCAGATTCGATCAGTACAGTACAGTGATCGATCTCTTTGGTTTTCGGCGGTGTGCAGGTTGTGAAGGCGGCTCGCGGGCAGCTCCCCGTCTTCCTCGACGGCGGCGTCCGCCGCGGCACCGACGTCTTCAAGGCGCTCGCCCTCGGCGCCGCCGGCGTCTTCGTGAGTACACCGGCGAACTAGCAAATCCATCAATGATTGCGAGAGGTGAATTCTCAACTGGTCGATTTCGTGTTCTTGCAGATCGGGAGGCCGGTGGTGTTCTCGCTGGCGGCGGCGGGGGAGGCCGGAGTCCGGAACGTGCTGCAGATGCTCCGCGACGAGTTCGAGCTCACCATGGCGCTCAGCGGCTGCACCTCCCTCGCCGACATCACCCGCAACCACGTCATCACCGAGGCCGACAAGCTCGGCGTCATGCCGTCTCGCTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025165

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025165&oldid=50759"