BGIOSGA025196

From RiceWiki
Revision as of 06:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025196| Description = Serine/threonine-protein kinase RIO1| Definition = Oryza sativa Indica Group BGIOSGA025196, complete gene.| tag = OS0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025196

Description

Serine/threonine-protein kinase RIO1

Definition

Oryza sativa Indica Group BGIOSGA025196, complete gene.

LocusTag

OS07G0162300

Ensembl Transcript ID

BGIOSGA025196-TA

Ensembl Protein ID

BGIOSGA025196-PA

Length

4845

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3212923..3217767

Sequence Coding Region

3212923..3213303,3213719..3213847,3214537..3214629,3214811..3214890,3215036..3215149
,3215386..3215459,3215613..3215689,3216414..3216497,3216588..3216680
,3216757..3216864,3216986..3217060,3217363..3217767

Genome Context

<gbrowseImage1> name=IndicaChromosome07:3212923..3217767 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:3212923..3217767 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCGCCGCCGCCGCCGCCGCCGCCGTGTACCTTCCCGAGGTGGATAGCCGCTTCGCCGACGCCGACGACGACGAGGAGGAGGAAGCGACGGTGAGGCCAGTCGAGGTGGCCGAGAGTAAGGATCAGGAGGAGGTGGAGGAGGAGGAGGATGAAGAGGAGTGGTCGGACTCCGACGTGGCCGATGCGCTCGACTGGCTCGACGCCGCGGAGGGCCCCGACGGCTCCGGCCGGCCAGCGGCCGCCTTCACGGCGGCAGGAGGCGCCGCCGCGGCGCGGAGGCCGAACGCGCACGGCGGGGTGCTGTCCCGCCCGTTCCAGCCGATCTCCAACCGCACGCAGAAGCTCGCCTCGCACATCCGCGCCACACCCCTGGAGGAATGGGAAGGTAGAATGAACGTGGGGATGTCAAATTCAGTGACGACTGCGATAAGGGACAGCATAAGGGAGACGGCAATTGGGAAAACAAGGAACACAGAGAAGGCTGATCGTGCTACAGTAGAACAGGCTATTGATCCAAGAACACGCATGGTTCTGTTCAAGATGTTAAACCGGGGGGTTTTTAATACCATAAATGGGTGCATTTCTACAGGGAAAGAGGCAAATGTCTATCATGCATCAAAGGCTGATGGCCAGGAGTTAGCGATCAAAGTCTATAAAACATCTGTCCTTGTTTTTAAGGATAGAGACCGATATGTCCAAGGAGATTACCGCTTTAGACATGGTTACTGCAAGCATAATCCTCGGAAAATGGTGAAGACCTGGGCTGAAAAGGAAATGAGAAATCTTTTACGAGTTGGAGCAGCTGGAATCCGATGCCCAAAACCATTGCTCCTGAGGCTTCATGTACTGGTGATGGAATTTATAGGAAAAGGAGGTTGGGCTGCTCCTCGTCTCAAGGATGCTGCTTTATCTGATGATAAGTTGCGGGAAAGTTATTTTGAGTTAATTACGACAATGCGGACACTCTACCAAAAATGCAAACTGGTCCATGGTGATCTGAGTGAATACAACATTCTTTATTTCGAGGGACACTTGTATATCATTGATGTTTCGCAGTCCGTTGACCTTGATCATCCTTCAGCGTTGGAATTCTTGAAGGAAGATTGCTTGCATGTTACTGACTTCTTTAAAAAACGTGGTGTTGCTGTCATGTCAGTAACAGAACTATTTAATTTTGTGATTGATCAAAATATTGCTGATGAAGATGTTGATCATTACCTGGAAAAGATTCAGCAAAAGATGTTGGAAAATGGAGATATGGTTGCAAACGACGATGAAATCACCCCAACAGTCTTGGTTCAGACGCTGGATTATGTGAAGCAATGCGAAGCAGATATTGTCAACATGTCATTGATGCAACGCCCATCCTTCGCGAATGAACCAACAGCGGATAAGCTTTACAACCAACCATTGCTAGGATTTGTGCGGAATAAAAACGAGCCTACCAAAAACCAGCAAGTACAATCAGAAGAACCTTTGGATCTGCAAAATAAGTGCTCCTCGGAACACAGTGAATCTTGCACTAGTTCCGATGAAGACGGTTCATGGCATGAGACTTTGAAGGTGGGACCTGAGGAAAGGAAGGCTGCTCGGAAGGAAAACAAGAAGAAAGTAAAAGCAGAAAAGAGAGAAGCTCGCAAAGATAAGATCCCAAAGGCTGAGAAGAAGAAGAGGAAGAAAATGGCAAAAGCCAAGTGCAAGCGGTAG</cdnaseq>

Protein Sequence

<aaseq>MATAAAAAAAVYLPEVDSRFADADDDEEEEATVRPVEVAESKDQEEVEEEEDEEEWSDSDVADALDWLDAAEGPDGSGRPAAAFTAAGGAAAARRPNAHGGVLSRPFQPISNRTQKLASHIRATPLEEWEGRMNVGMSNSVTTAIRDSIRETAIGKTRNTEKADRATVEQAIDPRTRMVLFKMLNRGVFNTINGCISTGKEANVYHASKADGQELAIKVYKTSVLVFKDRDRYVQGDYRFRHGYCKHNPRKMVKTWAEKEMRNLLRVGAAGIRCPKPLLLRLHVLVMEFIGKGGWAAPRLKDAALSDDKLRESYFELITTMRTLYQKCKLVHGDLSEYNILYFEGHLYIIDVSQSVDLDHPSALEFLKEDCLHVTDFFKKRGVAVMSVTELFNFVIDQNIADEDVDHYLEKIQQKMLENGDMVANDDEITPTVLVQTLDYVKQCEADIVNMSLMQRPSFANEPTADKLYNQPLLGFVRNKNEPTKNQQVQSEEPLDLQNKCSSEHSESCTSSDEDGSWHETLKVGPEERKAARKENKKKVKAEKREARKDKIPKAEKKKRKKMAKAKCKR</aaseq>

Gene Sequence

<dnaseqindica>1..381#797..925#1615..1707#1889..1968#2114..2227#2464..2537#2691..2767#3492..3575#3666..3758#3835..3942#4064..4138#4441..4845#ATGGCGACCGCCGCCGCCGCCGCCGCCGCCGTGTACCTTCCCGAGGTGGATAGCCGCTTCGCCGACGCCGACGACGACGAGGAGGAGGAAGCGACGGTGAGGCCAGTCGAGGTGGCCGAGAGTAAGGATCAGGAGGAGGTGGAGGAGGAGGAGGATGAAGAGGAGTGGTCGGACTCCGACGTGGCCGATGCGCTCGACTGGCTCGACGCCGCGGAGGGCCCCGACGGCTCCGGCCGGCCAGCGGCCGCCTTCACGGCGGCAGGAGGCGCCGCCGCGGCGCGGAGGCCGAACGCGCACGGCGGGGTGCTGTCCCGCCCGTTCCAGCCGATCTCCAACCGCACGCAGAAGCTCGCCTCGCACATCCGCGCCACACCCCTGGAGGTATGCAGCTTCCAACTCCTCTCTCTCTCGCCTCGTAGTAGTCGGTGCCTCGTGCTTTGTGTTGGTTGCACACTCCAATTTTTCACTGGGCCTGCTTATGTGATGATCCCATGTTTGCGTAATTTCACTTTGCAAGCGATTAGTGTATGCAATTACGTTATAAATTTTGGAGTATATTGTTTTGTTTTGGAATTTAGACAATCCATTCATCCTAGAACCCCGTATTGTTCAACTTGATTTCATGTAACTTTGCAGTAAAAAAAAAACTGCGGTGCTTAGCCCTGTAGCAAATCGGAGTGCTTACCTGTGTGCGTGTGCGCGTTGTGCGAGTGTGAGGAATGCTTGTTCACCTGTGTGTTGTGGTACTTTGTGAAGTTGTGCTGAAATGCAATGTGGTGAATTTTGAATTGTCCAGGAATGGGAAGGTAGAATGAACGTGGGGATGTCAAATTCAGTGACGACTGCGATAAGGGACAGCATAAGGGAGACGGCAATTGGGAAAACAAGGAACACAGAGAAGGCTGATCGTGCTACAGTAGAACAGGTATACACATTTTCTTAGTAGGTTGTATCCATTTCACTCTTGTGCTTCTTAAATTTACTATGTGCTGCCTGCACTTCTGCCCCCTTTTGTGTTTAATAGCAAACTAAAAAAGCATCCATCTCTGTTCATCCGAGTTTGCTCTTATTATGTGTACACCAACTCCGTGTGTTATATATTATATAATGCCTTGTTTAGCTGTACCGCATGGACAATAATTTGGACTGTAGCATTCAAGAAAATCGCTCTAGTGCAATTGACTGCTTTGGTAGGAAGTTCCTAAGATGTATTTTTTTTATGGCCTGTTGTGTTCACAAGGTTGGTAGGCAGTAGTTTTTAATATAAGCTTGAACAACACTGACTTAATGCCTAGTGCATTTGCTATAATGTTGTTAACTAGCATATTATCTCATATGTTCATTTCTCCTTTATATGTCATCCATTAATACTTATAATCTTTGTGCTTGATATCCATAAGAATGCTCTCTTAGCCATGTGATTTTCTTATTTTTGAGGTTATGATTCAATGAAATTTTCAGTGGTTATAGCTGCAGCATCTATCTCTTGTATCCTATCTAGAGAAAGTTATGATCTTCTAGAAAAGTGATAACATGTTTTGACTTATATGATTGATGATATTTTTGTGAAATGATTTTTGACAACTAGACGGGATTTTGTTTGTTCACATGCAGGCTATTGATCCAAGAACACGCATGGTTCTGTTCAAGATGTTAAACCGGGGGGTTTTTAATACCATAAATGGGTGCATTTCTACAGGGAAAGAGGTATTTTTTTAGTTCAACTGCATATCTTATTGACATTGCTTTCTGCTATTTGCAATTTACTTTCGTATGTGGATAAGAAAGCATGTTGAGAATATATACATAGTATAGAGCACTTTAGCTGTATACAAAAGATACAGAATCTGGCCTGGACTGCAAGTGCAATTTTCTTTTCTCTATGCAGGCAAATGTCTATCATGCATCAAAGGCTGATGGCCAGGAGTTAGCGATCAAAGTCTATAAAACATCTGTCCTTGTTTTTAAGTAAGGCTTTTGTAACAGGGTACTTTTTGACAGCTACTGCAGATATGTTGATTATGGATATGTTCTGTGTTTTCTAGTTTTACTAAAACAACTTGTTCTAAAAATAACTTGCATGTGAACAAACTACATTATTCTCTTCTTGCAGGGATAGAGACCGATATGTCCAAGGAGATTACCGCTTTAGACATGGTTACTGCAAGCATAATCCTCGGAAAATGGTGAAGACCTGGGCTGAAAAGGAAATGAGAAATCTTTTACGGTGAGATTCTTCTCATTTTTGCATCATTCATGCTTTACTCAGTAAATTTTCTTCTTTCAACGGGATTCTTCTGTTGCCTGAATTATTTTTTGTGTTATAAAGGGATGCAATTAGAGACAAACTTATTTCTGTTTTGGTTTAGCCAAATGTTTTCAATTGTTCAACAGGAACAATCCTATGCAAATACAATAGTTGATTATTTGAATATCATATGCTTATTGTTACCATTGTTTCAGAGTTGGAGCAGCTGGAATCCGATGCCCAAAACCATTGCTCCTGAGGCTTCATGTACTGGTGATGGAATTTATAGGTAAAACTTGTGTTTTAACATTTGTCAATTGGATGCTTGACAACTTCTCTATCTATAAAAAGGGTAAAATTTGGATGCTTGTTAACATTTGTCAATTCTATGGAATTATCAATAATTCAGTACATCTTGTAATTCGATTTGGTTTTCCTTCAGGAAAAGGAGGTTGGGCTGCTCCTCGTCTCAAGGATGCTGCTTTATCTGATGATAAGTTGCGGGAAAGTTATTTTGAGGTACATGACATATCTTGTGAAGATAAAGATAATATTGTAGTTCATATTAATTGTAAATCTGTAATAGATCCATCTGCTCTATATTACATTGCTTCTTACCCAGGATAGAAAACTTGCTGTATCCATGTACAACACGCAGTGGCTGTCATCAATTGTGTCTGATGACGCATTGACATTGAATTCTTCACATCCTATCATAATGTCATGTAGAAAGGATTGTTTGTATCTATTTACAGATAATAAATACGCACTAATGTGAACGCAATGTGACAGCTGAAGACAGGGCCGTATTTTCCTCAGTTCCTAGAAATCTGGAAAGGTTTAAGTGGATAGTAGGGCCGTGGATCTAGGAGAGTCTCTATTAGCAACATGTTCAGCATTGTTTTTTGGGTTTGAACCTAATTAAATGCCCACTTCATTTTGATGTGCTATCATGCAAAATGTGTGGTGATAATGTTCATGCATGAAAACTCTTTTGCATAGTTTTTCCCCTGATATCCAAGCAGTAGCATATATCCTTCATTTGCTCATGCCCATGGACACTATTGTATCTTTACTGTCAAGTATTCAGAAAAGTTCGGCAGATTAAGGTGTTGCCTCTAGAACAATGGGAGCATAAGTACTCCTGCAATATGCACTTATTGTTTTTTCGTAAGGGAACTGTTTAGTGTATTTTTTATGTGTATAACACCTTCAGTTTTCCCATATGCAACTTCTTTTTCAGTTAATTACGACAATGCGGACACTCTACCAAAAATGCAAACTGGTCCATGGTGATCTGAGTGAATACAACATTCTTTATTTCGAGGTAGTTGAACTCTGTTTATTATATTTTTTAACATCATTTTTTTTTTCAGATCAATGGCTCTGATTCCCACCATTTATTCTCCTTGTGCAGGGACACTTGTATATCATTGATGTTTCGCAGTCCGTTGACCTTGATCATCCTTCAGCGTTGGAATTCTTGAAGGAAGATTGCTTGCATGTTACTGTGAGTAGAAGTTGAATTGACACTGCATAGACATTCGTAGATTGTGATATTCAAATGTGTGTGATGCTATTTGCAGGACTTCTTTAAAAAACGTGGTGTTGCTGTCATGTCAGTAACAGAACTATTTAATTTTGTGATTGATCAAAATATTGCTGATGAAGATGTTGATCATTACCTGGAAAAGGTATTTTCTCAATGTCACCTTTCAGTCTTTCTATAGCCACTGAGTTCTAGATGTGCCCTGATCATGTTGCTTTATGATGGGCAGAATGTCTGATGGATTAACAATTTTGTTGTGATGTTAGATTCAGCAAAAGATGTTGGAAAATGGAGATATGGTTGCAAACGACGATGAAATCACCCCAACAGTCTTGGTTCAGGTAAGATAATGAGTAAGTTAATATCATTGTTTGCACAGTTTGCCAAAAAATCTCTATTTACTAAACATTATGTTACTCATCAATCATGGATAATTCAATATTTAACTCTACATTTATTTTGTTGGTTCTACATGCTTTTGCTCTACAGTATATATAGGCCGTGATCTTTGCTAGATCTATGACTTACACTATTTTGTAATTACGTTGTGTTCATTTTGTTTCGTTTGTAATGTTTGTGCTGCATGCTGTATGATGGCGTATGTTTGAATTACTGATGCTTGATTGTTAATTCTATTTCATAGACGCTGGATTATGTGAAGCAATGCGAAGCAGATATTGTCAACATGTCATTGATGCAACGCCCATCCTTCGCGAATGAACCAACAGCGGATAAGCTTTACAACCAACCATTGCTAGGATTTGTGCGGAATAAAAACGAGCCTACCAAAAACCAGCAAGTACAATCAGAAGAACCTTTGGATCTGCAAAATAAGTGCTCCTCGGAACACAGTGAATCTTGCACTAGTTCCGATGAAGACGGTTCATGGCATGAGACTTTGAAGGTGGGACCTGAGGAAAGGAAGGCTGCTCGGAAGGAAAACAAGAAGAAAGTAAAAGCAGAAAAGAGAGAAGCTCGCAAAGATAAGATCCCAAAGGCTGAGAAGAAGAAGAGGAAGAAAATGGCAAAAGCCAAGTGCAAGCGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025196