BGIOSGA025212

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Revision as of 06:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025212| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025212, complete gene.| tag = OJ1641_...")
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Gene Name

BGIOSGA025212

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025212, complete gene.

LocusTag

OJ1641_C04.124-1

Ensembl Transcript ID

BGIOSGA025212-TA

Ensembl Protein ID

BGIOSGA025212-PA

Length

3401

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3490215..3493615

Sequence Coding Region

3490215..3490505,3491020..3491247,3491351..3491472,3491982..3492201,3492669..3492811
,3493239..3493376,3493510..3493615

Genome Context

<gbrowseImage1> name=IndicaChromosome07:3490215..3493615 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:3490215..3493615 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGCACGACCTGACGGCGCGGATGGCGGGGCACCTGGACTGCCACCTGGTGCTCCCGCTGCTGGAGTTCCTGCAGGAGCGGCACCTCTACCCGGAGGAGGAGATCCTCGAGGCGAAGATCCGCCTCCTCCGGGGCACCAACATGGTCGACTACGCCATGGACATCCACAAGTCGCGCTACGGCACCGACGACGTCCCCGAGGACATGGTCAAGCGCCGCGCCGAGGTCGTCTCCAGGCTCACCTCGCTCGGCGAGGCCATCGACAACATCCACCAGAACCAGCAGATTGGTCCTGATCAGATTGAGACTCTGTATCAGTATGCCAAATTTCAGTTTGACTGTGGGAATTACTCATTTGCTGCTCAGTACTTGCATCAATACCGTGCTCTGTGCACAAACATTGAGAGGAGCTTGAGTGCCCTGTGGGGAAAGCTGGCAGCTGAGATTTTGATGCAGAACTGGGATGTTGCACTGGAGGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAGAACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCACTGGAGTATCTTTATCTTCTACAACCATGAAAACGGCAGAAATGGGATCATAGATCTGTTCTTCCAGGAGAGGTACTTGAATGCAATCCAGACAAATGCACCACATCTTCTGAGATACCTTGCTACAGCAGTTGTTGTGAACAAAAGGAGAAGGAATATGCTTAAGGAGTTGATTAAAGTCATTCAGCAGGAGCAGCACAGCTACAAGGATCCCATTACTGAATTTCTGGAATGCTTGTTTGTTAACTATGATTTTGATGGCGCACAACAGAAACTCATAGAGTGTGAGGAGGTCATATTGAATGATCCTTTCCTGGGAAAGCGCATTGAGGAAGGGAATTCCATCACTGTTCCTTTGAGAGATGAATTCCTTGAAAATGCTCGTCTGTTTATCTTTGAAACTTACTGCCGTATTCATCGGTCCATTGATATTGGCATGCTCTCTCAGAAACTGAACATGCGCTATGATGAAGGGGAGTTGTGGATAATGAACTTAGTTAGAAATTCAAAGCTCGATGCCAAGATTGATTCAGTGTCTGGAACTCTTATCATGACGACCAATCATGTTAACATCCACGAGCAGTTTATCGAAAGCTTGAAGAATCTTAACATGCGGACTTCCATGCTAGCAAAGAACATTGTGGAGCCAGCTCAAGCAATGCAACAGGCAACTCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAEHDLTARMAGHLDCHLVLPLLEFLQERHLYPEEEILEAKIRLLRGTNMVDYAMDIHKSRYGTDDVPEDMVKRRAEVVSRLTSLGEAIDNIHQNQQIGPDQIETLYQYAKFQFDCGNYSFAAQYLHQYRALCTNIERSLSALWGKLAAEILMQNWDVALEELNRLKEIIDSKNFSSPLNQLQNRIWLMHWSIFIFYNHENGRNGIIDLFFQERYLNAIQTNAPHLLRYLATAVVVNKRRRNMLKELIKVIQQEQHSYKDPITEFLECLFVNYDFDGAQQKLIECEEVILNDPFLGKRIEEGNSITVPLRDEFLENARLFIFETYCRIHRSIDIGMLSQKLNMRYDEGELWIMNLVRNSKLDAKIDSVSGTLIMTTNHVNIHEQFIESLKNLNMRTSMLAKNIVEPAQAMQQATR</aaseq>

Gene Sequence

<dnaseqindica>1..291#806..1033#1137..1258#1768..1987#2455..2597#3025..3162#3296..3401#ATGGCGGAGCACGACCTGACGGCGCGGATGGCGGGGCACCTGGACTGCCACCTGGTGCTCCCGCTGCTGGAGTTCCTGCAGGAGCGGCACCTCTACCCGGAGGAGGAGATCCTCGAGGCGAAGATCCGCCTCCTCCGGGGCACCAACATGGTCGACTACGCCATGGACATCCACAAGTCGCGCTACGGCACCGACGACGTCCCCGAGGACATGGTCAAGCGCCGCGCCGAGGTCGTCTCCAGGCTCACCTCGCTCGGCGAGGCCATCGACAACATCCACCAGAACCAGCAGGTCAGGCCCAAACTTACCCCCACGCCCCCCTCGATCTAGCTGCAGGGCTTGCGGCTTACTAGATCTGTTCATCGTCTAGTTGGTGTTAGCTGTATGTAGGTTTTGAGTAGCGTTGTAGTTTGCAGATGGCGATGCGAAGGTTGGGGGATTGGTTAAGTATGTTCACTTGTTGGGGGCACAGTTGAATGTGTGATGTGGGGGATTGGGATGCAGGTGCCCAGCAATTGTGTACTGTGTACATAGTCGATAAATCCCCAATTATTGAATTAAAACTGCGGGAGAAGGATATCTGATGATTCTTAGCTTCAGATGTTGTTTGATCTTAATATGGTGTATATGGTTAGAATAATTGTATATTGCCATCAAGTCTGGGGGATGTTCTGATGTCTTGCATCCGTTTATGTGAGGGACAACTCTTGATATTCCCCTTCAATTGTTAATTTTTGTAGTTACCATATGCCAAGTCATTTAGGTTGCTATGCAGTTAATAATCGTATTCTTGTTAACATTGCAGATTGGTCCTGATCAGATTGAGACTCTGTATCAGTATGCCAAATTTCAGTTTGACTGTGGGAATTACTCATTTGCTGCTCAGTACTTGCATCAATACCGTGCTCTGTGCACAAACATTGAGAGGAGCTTGAGTGCCCTGTGGGGAAAGCTGGCAGCTGAGATTTTGATGCAGAACTGGGATGTTGCACTGGAGGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAGGTTTGCTTGAATAACTGATTGGAGACTTTATCAATAGTTCCTGTTGGGAGTGGCCAGCTGCTTTATATAACTTCGTTTGTTACTTCTTTGTTTCATCTCCCAGAACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCACTGGAGTATCTTTATCTTCTACAACCATGAAAACGGCAGAAATGGGATCATAGATCTGTTCTTCCAGGAGAGGTTTGTTTACTAAAATTTCATGATTATTGTGTTCACTATTGTCTTATGCAGTTACACAGCCAATGGTACCCTGGTTCAACAACCAATAAGCAATGCCGCTAAAAACTAACACTAAATGACTTGTTTTCGCTGGTAAGGTATTAATAATTTGCCCCATGGTTTAATGTCTAGGATAGAACCATGCAAAGCTGCCAATTAAAAAATCTATATATTTTTCGTACATTGAGTTAACTCTTAAGATGTGTTTTGCTGGTATACATAGAACTACGTTAAGATATAAAAAGAGTGAAAAATTTTGAAGTAGGTTTTTCTGGACAAGCTGAATGTGAAGGAAAATAACAGCAGAATCAAAGAGGAGATTATAGAGCCAAGGGGCTATTGTCGTCCGTAAAGCATTTGCTTTATTATTTGTAATGTGCTATCTAGTTCCCATGATGGAAAATATGTTTGTCTGTGATATCAAATTTTATCTCAGCTAACTTTTCAATTTGCATTTTACGTCTCCTCAGGTACTTGAATGCAATCCAGACAAATGCACCACATCTTCTGAGATACCTTGCTACAGCAGTTGTTGTGAACAAAAGGAGAAGGAATATGCTTAAGGAGTTGATTAAAGTCATTCAGCAGGAGCAGCACAGCTACAAGGATCCCATTACTGAATTTCTGGAATGCTTGTTTGTTAACTATGATTTTGATGGCGCACAACAGAAACTCATAGAGTGTGAGGAGGTATATTAGCGCGTCTTGAACCTTTTGTCCATCCCCATGATTAATCTGTTTTTTACTTAATGCATTATTGTTGAAATATAAAATATTGAAAGATAATTTCCCCTCTTTTTCTTTGTTTGGAAAAAAAAGTTATATGTTCACACACTACTGCTATATGATGCCTAACTTTTTTTTTTGCGATCAAAGTTCAGCTTTCACATCCTTATATCAGAAAGGCCTGTCTGAGGGTGTCTGACGGTGCCCTGGCCTGTAAAATTTCCAGAGTTGAACGTTAGGTCATTAGCTCATTGTTGTTACTTTTCTATTTTCCCTCCTTAAATTAAATGAGAACCACTTCTCTGGGCATACCGGTGATTTTGCACTACCAAATTCTAGGCTATTTCTATACGATATCTAATAGCACTGTCTTCTCAATGGTGATCATATTGCAGTCTTGCATTTCTTTGTCCTAATGGCTGCCTTTGTAGGTCATATTGAATGATCCTTTCCTGGGAAAGCGCATTGAGGAAGGGAATTCCATCACTGTTCCTTTGAGAGATGAATTCCTTGAAAATGCTCGTCTGTTTATCTTTGAAACTTACTGCCGTATTCATCGGTCCATTGATATTGGGTGGGTGTTTTTGTCTTACTACTCACTTTTTTTTTCTGTTAACATGCAAAAGTCCACTATAGATGAATAGTAGGGAACTGCAGTTATTAATTATCAATTCACTAAATCATACTGTATATCGAATACAACAAATCGGTTCTGTGCCTTGCTTGGTCTTGCATTATTTTTGTCAGTCAGCTGCTTTCCATATTGTAGGGACAACACTTCATGTTTAGCGGCAAAAAAAAAAAGGAAAAAGAAAAAAGAACTGTAATGCGCTACATGGTGGCAGTTATCTGTTGCATCTTTCTGTTCTGTCATCTCAGTTAGGAACAGTTTATTAAATTCTCAGGGTTCATGCGTTTTATTCTTTATATTATATGGACCATGTAGGAATGCAATTTCTTTCAAATCTAAGAAGTTATTTCAATTTTTTTGCAATGAACAGCATGCTCTCTCAGAAACTGAACATGCGCTATGATGAAGGGGAGTTGTGGATAATGAACTTAGTTAGAAATTCAAAGCTCGATGCCAAGATTGATTCAGTGTCTGGAACTCTTATCATGACGACCAATCATGTTAACATGTAAGTTTCTTCAGCCAATCACCCATACACGCAATTCATGCTAACTTCTGGGCAAGCATCACTTGAATACTGATCTATTTTTCTATCATCAATTTACGAGGGAGTTTTTCCAACATATCCTTTTTCATTGCAGCCACGAGCAGTTTATCGAAAGCTTGAAGAATCTTAACATGCGGACTTCCATGCTAGCAAAGAACATTGTGGAGCCAGCTCAAGCAATGCAACAGGCAACTCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025212

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025212&oldid=50806"