BGIOSGA025226

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Revision as of 06:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025226| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025226, complete gene.| tag = P0496D0...")
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Gene Name

BGIOSGA025226

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025226, complete gene.

LocusTag

P0496D04.17

Ensembl Transcript ID

BGIOSGA025226-TA

Ensembl Protein ID

BGIOSGA025226-PA

Length

3365

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3668553..3671917

Sequence Coding Region

3668553..3668661,3670427..3671082,3671353..3671775,3671879..3671917

Genome Context

<gbrowseImage1> name=IndicaChromosome07:3668553..3671917 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:3668553..3671917 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGTGCGTCCGCACCGGCCTCCATGGGCGGCTCACCCCTCTGCTCATCAACCTGCCTCGCAGTCAGGAGACCCTACATATCGTCCTTATTAGGACCAACACCACAGGGGATGATAAATTGTTGTCCTCAACTCTGACTGACGAGATGCAGCCAATGAACTCCATGGGGGCTGCTGGCTCCTCCACCGCTACGGGTGCTGCTGGCTCCAACCACACCGCCGATTCTACAGTTCCACCGTCGCTGCTGTCTTCAGAGCATCACCGCTCGACTGAGTCGGACCCGTCAGCTGAGCACGAGCGCCACGACATCACCAAGAACAACCTCAGTGGCGGCATGAGGGCAGTCGATGCCGAGGCCTCCTCTTCCTCAGCTGTGGACATGGCTAGCGGCAAGAGAGCCAAGGGTAAAGGAAGGATAAATACCGAAGTGGACAATGACAGGATGGTATTGTGGACTAATTTAGAGAAGGCAGAGGATGATCTTTGGCTCAGAGAGGAGCAGCTTTCAATTGAAAGATTAATTCTGTGTCAAAAAGCACTGGAGATGGAGGAATCTGAACGTGTTCACCGACGTATACAGAGCTGTCTTTTTCGCTGGAACACTTACGCTCTCTCGGGCAATGAAGATTTGTTGTCCCCGTTGATTTTTGCTCCAATGCCCAGGCCTGATAAAACTTCGACTCCCCAAATATTCAGCACTGAGAATACAGTTGTTGCTCCCAGTCCGACTGCTCAGAATACAAGTGCTGATGTCACAGATACGGGAGACAAGGACGTTTGGAATAAAAGACAAATTGGCTATGTCTACATATTGGGCACATCTTTAGCCGTGTTATTCTTTCTCCGGCCTCTGTTGCCCGCTGGTTATGGTATATGGATGCTTGCAGCATTTGCAACTATCTGGGGCTTCGGGAGCGTTGGTCTCCCTGCCGGGATGTTTGGGGAGAAGTTTCCAAAGATCTTCAGTCGGCATATGGGACATGTCCTGTATGCGGCCTTTTCAGTTCTAGTCATATACAGCATCTATCTTTTGGCACTGAGTACGCCAACTTCGCCATTGGCCCCTCCTCCACCCTCGTCACCTTTGGCCCCTGCAGTTCACGACAATGAGTTGTGGTTTTGGAGGTTGGTTTTTGGCTTCATTGGCAGTGTGGTGCTATTTGGGCATTTGTATTTGTGGGCAAGGAGCTGTTGTACGGGCGTTGATCAAGACCCGGACCTTTAG</cdnaseq>

Protein Sequence

<aaseq>MLCVRTGLHGRLTPLLINLPRSQETLHIVLIRTNTTGDDKLLSSTLTDEMQPMNSMGAAGSSTATGAAGSNHTADSTVPPSLLSSEHHRSTESDPSAEHERHDITKNNLSGGMRAVDAEASSSSAVDMASGKRAKGKGRINTEVDNDRMVLWTNLEKAEDDLWLREEQLSIERLILCQKALEMEESERVHRRIQSCLFRWNTYALSGNEDLLSPLIFAPMPRPDKTSTPQIFSTENTVVAPSPTAQNTSADVTDTGDKDVWNKRQIGYVYILGTSLAVLFFLRPLLPAGYGIWMLAAFATIWGFGSVGLPAGMFGEKFPKIFSRHMGHVLYAAFSVLVIYSIYLLALSTPTSPLAPPPPSSPLAPAVHDNELWFWRLVFGFIGSVVLFGHLYLWARSCCTGVDQDPDL</aaseq>

Gene Sequence

<dnaseqindica>1..109#1875..2530#2801..3223#3327..3365#ATGCTGTGCGTCCGCACCGGCCTCCATGGGCGGCTCACCCCTCTGCTCATCAACCTGCCTCGCAGTCAGGAGACCCTACATATCGTCCTTATTAGGACCAACACCACAGGTAATAATCAGACTAATTTGATATGCATGTTGCTGCTGAATACTCTGAATATTGTTTCTAAATGTCCTGCGTAACTTGAGATTATTGATAATGCCGTAGATGTTCTGAATTCTGAATTTCTGATAGGGGATGACAGTGACTGAATTTCCTGAAGCATTTAGGGTGTCTCTGTCTTTTTATTGGGGAATTTTGACGCTGCCCAGTTTGTAGATGTGGAATCTAGTTAGTTAGAGGTATTTTACTTGTTCGGATGACCAATTGTTACACCAGTTAGAACACAAGTGAGTTCTTGAAATTTTAAACTACATCAATGAGTCTTGGGTAGTTCACTAAATGAAGACTGCTTGACATTTTTTTGTGGCCATGTTTGCTAGAATATTGACAATCCTGTGAGCAATGTTCTGCTTTTCGGGTCCCTTTTGTCCTTTCAATAATGTAGATTTTGTAGTTTACAGTACCATAAATTGTTCAGTACTGTTCAATTAAGCAATTATATGCATGTTGCTGAATATTGTTTATGTACTCTTGAATTTTGCTGCAAAAAGAACATATGACATGCATCACTAGAAATTGACTAGAGATTATTAACAATCCAGTGGGCAATGCACATGTTTCTGTTTTTCAGCACCATAGTTTTCAGCAATGTGTATTATCTTTTTTGTCCGTGTTGAATTTGTGGAAAAATGCAAGTCATATGTTTAATGCTGAGTTAGGACTTGTTTGAAGAATGTTGTAGGGAATCAAAAGTGAAATGTATCTGAACTTATCTGACAAATTTATTGTTAGGCAACACCAAAAATTTGTGTTCACTTTGGGTATATTTTGTGTTTCTTGACGATATTTTTATCTGATTGTCGCGAAATTTTTAGATGATCATCTGAATATTGTAGATAGACAGGACCAGTGGTAGCTGAATGGTATGTTAACACTGGTCTATGACAACCTAATTCTGATTAGTGTTGACAGTAACTGAACATTCTGAAGCATTCACGACATGCCTCTGACTTTCTATTTGGGAATTATGAAGCTGCCAATTTGCAGATGTGACATGCTATGTTAGTTACTGGTGTTTTTTACTTGTTCCAGTGACCACCCTAAAGGCCTAAACCAATTGTGAGATCAGTAAAGAACACGAGTCCTTTTTGCTAGTTCAGCACTGTATATTTTGCAGTATTCAGTAATGCTTTTTTTTTTTTTTGCGACGATGCAGTATTCAGTTATGTGTAGTATTCAGCACTGTATATTGTGAGATCAGTAAATAACACAAGTCCTTTTTTGTTTGTTTGTTTGAATTTGTGGAAAATCCAGTCCTGTCTTTGCATGTTGAGTTAGGAATTCTCTAAAGAATATTGTAGGACATCAGAAGTTAAATATATATGCACTTAACTGACGAATTTTCGTGCTAGGCAACACCAGAAAAAAAATGTATGCACTTTGGGTATAATATATGTTTCTTGGCAGTAGGATTTATCCAAATGTTGTGCATTTTGTCGCCGACGAAGGCGACCCATGATTTAGCGGATCTTTTCTGTGCTGAATTTCTTACAGGCTCAATGAATTGGACAAAAGATTAGTGTGTTGGTTAGAAACGTAGAGTAAATTTTCAGTTCAGCCGATGCTGGCATACAGTTTTAATGTTTGCTTCTCAGTTTAGTGTGAAATTCAACATCTTTAACTTAGAATTACTTTTACTGTTTTTACTTGCAAGAGTAGTACTTCTTGTGTATCACACTAATTGCATGTTTTTCTTTTGCTATGGGTGCAGGGGATGATAAATTGTTGTCCTCAACTCTGACTGACGAGATGCAGCCAATGAACTCCATGGGGGCTGCTGGCTCCTCCACCGCTACGGGTGCTGCTGGCTCCAACCACACCGCCGATTCTACAGTTCCACCGTCGCTGCTGTCTTCAGAGCATCACCGCTCGACTGAGTCGGACCCGTCAGCTGAGCACGAGCGCCACGACATCACCAAGAACAACCTCAGTGGCGGCATGAGGGCAGTCGATGCCGAGGCCTCCTCTTCCTCAGCTGTGGACATGGCTAGCGGCAAGAGAGCCAAGGGTAAAGGAAGGATAAATACCGAAGTGGACAATGACAGGATGGTATTGTGGACTAATTTAGAGAAGGCAGAGGATGATCTTTGGCTCAGAGAGGAGCAGCTTTCAATTGAAAGATTAATTCTGTGTCAAAAAGCACTGGAGATGGAGGAATCTGAACGTGTTCACCGACGTATACAGAGCTGTCTTTTTCGCTGGAACACTTACGCTCTCTCGGGCAATGAAGATTTGTTGTCCCCGTTGATTTTTGCTCCAATGCCCAGGCCTGATAAAACTTCGACTCCCCAAATATTCAGCACTGAGAATACAGTTGTTGCTCCCAGTCCGACTGCTCAGAATACAAGTGCTGATGTCACAGATACGGTATGTCTCCTACTATGCATTGTTTTTATCATTAATGCTGGGACTATTACTATAGGGCAAAAAAAGAACAAAAAATTATTAGCATGAAAATAGTTGCTTGTTCTGCATTTTTTGCCTGCGAAAGATATTACACATTTGTTATTTTTGCATCTCAATCAATTCTACGAAAACTTTACACTTGCTACTGTTGTGCTTTAAGCAATGTTAACGATAAAGTATATAATGTTAATGTTTTCAGTACAAGCATATAATGTTAATGTCTATATACAGGGAGACAAGGACGTTTGGAATAAAAGACAAATTGGCTATGTCTACATATTGGGCACATCTTTAGCCGTGTTATTCTTTCTCCGGCCTCTGTTGCCCGCTGGTTATGGTATATGGATGCTTGCAGCATTTGCAACTATCTGGGGCTTCGGGAGCGTTGGTCTCCCTGCCGGGATGTTTGGGGAGAAGTTTCCAAAGATCTTCAGTCGGCATATGGGACATGTCCTGTATGCGGCCTTTTCAGTTCTAGTCATATACAGCATCTATCTTTTGGCACTGAGTACGCCAACTTCGCCATTGGCCCCTCCTCCACCCTCGTCACCTTTGGCCCCTGCAGTTCACGACAATGAGTTGTGGTTTTGGAGGTTGGTTTTTGGCTTCATTGGCAGTGTGGTGCTATTTGGGCATTTGTATTTGTGGGCAAGGGTAAGCAAATAATTAAATTCTCTCTTATCTATTCCTAGTTTCTATATAATGTCATGGTAGGTAGATAATAATACTGTATCATTATCATTAATTGTTAATGCAGAGCTGTTGTACGGGCGTTGATCAAGACCCGGACCTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025226