BGIOSGA025227

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Revision as of 06:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025227| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025227, complete gene.| tag = OsI_250...")
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Gene Name

BGIOSGA025227

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025227, complete gene.

LocusTag

OsI_25064

Ensembl Transcript ID

BGIOSGA025227-TA

Ensembl Protein ID

BGIOSGA025227-PA

Length

3016

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3684697..3687712

Sequence Coding Region

3684697..3684981,3685073..3685183,3685328..3685414,3685514..3685746,3685963..3686041
,3686328..3686471,3686684..3686723,3686822..3686884,3687348..3687379
,3687475..3687516,3687617..3687712

Genome Context

<gbrowseImage1> name=IndicaChromosome07:3684697..3687712 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:3684697..3687712 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGAGGCCGACGAGCGGCGCCGCCTCCGCTCCCTCGCCTTCTCTAATGGCTTACTCCAGCGCGGGGAGCCGGCGGCGCCGTGCTCGGTGCTCGCGCCCTCCACTGTCGTGTTCGCGGCTGGAGGGCCGGGAGATTGTGTGCCGAGGCGGGCAGCGCAAGAGCCGCTTCCTCTTCTCATTCCCCGGCCTCCTCGCGCCCGCGGCTGCTGCCTCGGGCGGCCGCGTCGGCGAGCTCGCTGATCTTGGCACCAAAAATCCTCTGCTCTACCTCGACTTCCCACAGGGGAGGATGAAGCTGTTGGGGACGCATGTGTACCCCAAGAACAAGTATCTGACACTGCAGATGAGCAGGTCCACCAAGGGCGTTGTCTGCGAGGACGTCTTCGAGAGCCTGATTGTTTTTTCTGAAGCCTGGTGGATTGGAACAAAAGAAGAAAACCCACAAGAACTGAAACTGGATTTTCCAAAAGAGTTCCAGAATGATGGGGCTGTTGCAGATTCTGATTTTAAAGGTGGAGCAGGTGCTTCCTGTGATGAAGCTGTTACCATCAATAAACCGCCAAAGGAAACCACCACAGGATCCCTTTCCCCAAAGATTGAATCTGACATTGATTCTTCCGAGGATTCAGACCTTAAGGACGAGGATAACACACAAAGCACTAGTCAAGCACCTTCAGTTAGGCAGTCTGCTAGAACTGCTGGGAAAGCCTTGAAGTATACTGAGATATCCTCTGGAGACGATTCATCTGATAATGACGATGAGATTGATGTCCCTGAGGACATGGATGAGAAGGTGAAGAGTCCGGCAGTTAAGAATGAATCCCAAAGTGAAGACATTAAACCTGCAGATTCATCTGCGCAGCCTATCTCAGCTAAGAAGGAGCCACTCGTTCAGGCTACTCTGTCTAGCATGTTTAAAAAAGCAGAAGAAAAAAAGAGATGTACTAGAAGCCCGAAAGGATCTCCAGCAACAAAAGGACCTGCTGCTAAGAAGCAGCGAGCAAGTCCAGAGGAAAAACATCCAACAGGGAAGAAGAGTGCTGGCAGAAGTCAGAAAAAGAGAAAAACACAGGTAGAAGATGACGAAATTGAAGTGCTCTCAAGTTCCTCCCAGCTAATCCTAACAGCATATGACAGGATAACAATGTGGACGATGATAGCGATGAAGACTGGGCTGAGTGATGTGCAGCTGAAGTTGAAAGGAATGTAG</cdnaseq>

Protein Sequence

<aaseq>MRRPTSGAASAPSPSLMAYSSAGSRRRRARCSRPPLSCSRLEGREIVCRGGQRKSRFLFSFPGLLAPAAAASGGRVGELADLGTKNPLLYLDFPQGRMKLLGTHVYPKNKYLTLQMSRSTKGVVCEDVFESLIVFSEAWWIGTKEENPQELKLDFPKEFQNDGAVADSDFKGGAGASCDEAVTINKPPKETTTGSLSPKIESDIDSSEDSDLKDEDNTQSTSQAPSVRQSARTAGKALKYTEISSGDDSSDNDDEIDVPEDMDEKVKSPAVKNESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKKAEEKKRCTRSPKGSPATKGPAAKKQRASPEEKHPTGKKSAGRSQKKRKTQVEDDEIEVLSSSSQLILTAYDRITMWTMIAMKTGLSDVQLKLKGM</aaseq>

Gene Sequence

<dnaseqindica>1..285#377..487#632..718#818..1050#1267..1345#1632..1775#1988..2027#2126..2188#2652..2683#2779..2820#2921..3016#ATGCGGAGGCCGACGAGCGGCGCCGCCTCCGCTCCCTCGCCTTCTCTAATGGCTTACTCCAGCGCGGGGAGCCGGCGGCGCCGTGCTCGGTGCTCGCGCCCTCCACTGTCGTGTTCGCGGCTGGAGGGCCGGGAGATTGTGTGCCGAGGCGGGCAGCGCAAGAGCCGCTTCCTCTTCTCATTCCCCGGCCTCCTCGCGCCCGCGGCTGCTGCCTCGGGCGGCCGCGTCGGCGAGCTCGCTGATCTTGGCACCAAAAATCCTCTGCTCTACCTCGACTTCCCACAGGTATCCTATATCTATCTATCTATCTATCTATTCCGTCAGGTAGGTGAGATGGTATGATATGTATGTTGTGGGTGGGTAATGAATGTTTCAGGGGAGGATGAAGCTGTTGGGGACGCATGTGTACCCCAAGAACAAGTATCTGACACTGCAGATGAGCAGGTCCACCAAGGGCGTTGTCTGCGAGGACGTCTTCGAGAGCCTGGTTACTTCAAACTTCACATCTTTGCTCTGCCTGCCCTGTATCTATCTTGGAAGTGGAACTTGCATCCGCAGAATTGCTGCTATGCTCGTCCCTTTTCTCTGGGGTGTTATTGGTAACTACTTATGCTGCTGTTTTATTTGGCAGATTGTTTTTTCTGAAGCCTGGTGGATTGGAACAAAAGAAGAAAACCCACAAGAACTGAAACTGGATTTTCCAAAAGAGTTCCAGAATGTGCGTGTGCTCTCCATCCATATATGTTCTTAATTTTCGCTTCTTCTACGACGCTACTGTGCCTCTCATCTCATGTGCTTCTTCATTTCAAACTGGTAGGATGGGGCTGTTGCAGATTCTGATTTTAAAGGTGGAGCAGGTGCTTCCTGTGATGAAGCTGTTACCATCAATAAACCGCCAAAGGAAACCACCACAGGATCCCTTTCCCCAAAGATTGAATCTGACATTGATTCTTCCGAGGATTCAGACCTTAAGGACGAGGATAACACACAAAGCACTAGTCAAGCACCTTCAGTTAGGCAGTCTGCTAGAACTGCTGGGAAAGCCTTGAAGTAAGTCAGTTTCACCCTTTTCTGTTGCTCTCTCGGATAAACAGAAAAGCACACGGACTCTAGTTGTTGCTTAGCAGCTGAAAGATTGCCTACTACCTGTATTTATTTGGCTTAACGGCTAATGTTTCTAAAAACAAATATATTCATCTCCCACCCACCCAAAAAAAGGCAAAGAATAAAAAGGTATACTTGATAGATCCCTCGCTCTTTATGCAGGTATACTGAGATATCCTCTGGAGACGATTCATCTGATAATGACGATGAGATTGATGTCCCTGAGGACATGGATGAGAAGGTAGTGATACCGAATTTAATTTCCCACGCTTTTGTTGCATATAACGTAAAAGTAGCAGCATATAATGTAAAAGTTGCAGTTTTGTGAAAATTTCCCACGCTATTGTTGCAGGAAACTGAAACATGTCGCTTATGTTGCAGCAAACTGATAGTTTTGTCACTAAAGTTGCAGTTTTCTGAAATTTACTCAATTTTATAAGATTCAAATATATGAATCAATGTCTATCAAGCTTTTATCTTTTGTAAATAATTTTATTGTGTTTATTTGCTTTCTTCGTTTGAAGCAGGTGAAGAGTCCGGCAGTTAAGAATGAATCCCAAAGTGAAGACATTAAACCTGCAGATTCATCTGCGCAGCCTATCTCAGCTAAGAAGGAGCCACTCGTTCAGGCTACTCTGTCTAGCATGTTTAAAAAAGCAGAAGAAAAAAAGGTGGAAATTCATACCTGTTATTATAATAGTTTCTCTCCTTGTGATAGTGGGCAGTTATACCCTTAACTTCGATATAATGTTTGCTTGATGCATTAATTGAACCAACTTCACAACATACCTCTTTTTTCGTATGTGTGTTTTGAACATTATCTGTTTTCATGCCTGGTACAAATAAATTAGTTAAGCATCTGACAAAAGGATTTCTATTTCAGAGATGTACTAGAAGCCCGAAAGGATCTCCAGCAACAAAAGGTTCTTCATATTTACGCAATTCTAGGTTTCTTGTGTTTTCCTTTATTACACAACGAAAATTCCTTTTGATTGGACTTGTGATTGGCATTGTTCTACAGGACCTGCTGCTAAGAAGCAGCGAGCAAGTCCAGAGGAAAAACATCCAACAGGGAAGAAGAGTGGTAAGTGCAGTAGCAAGTCTGTTGTTAGAAGCATCTAATAGACCTTGGTGCGATTACATTTGTTTTAAGCCTCTGAAGGCCTTCTTCAATGGAGAAGACTTGTTCTAAAATAATCCAAAGGCTTTGGGAGGCTTACTTGAGAAGCTTTCAGCTTTTGTCTATGTAAGGGGCATTTAAAATATTAATCCATTTCATGAAGCTTTAGGACCATCTCAAGCCTGTCGAATCGGAATAAATGATGGAATTAACATCTATTGTGGTGGCTCTATACTAAATATGCTATTTGAATTTTACAAGACTTGATATTGCTGGGTAAAAGCTGTGATGCATGGGGGGAAACAAATGCATTTTAGTGGCTCTTAGTGCAATGTGCAACGATCTATCAGCTTTTCTTTAACTGAGTACATCAGTACATGTTAGTGTTCTTCATATGAAGCTGACAATTGTATTTACATGGATGTAGCTGGCAGAAGTCAGAAAAAGAGAAAAACACAGGTACTTTACTTAGCAACAATGATCAGGGATTTTAATTTGAATGTCGCCCATTGTTTACTTTGCTGATTGCCTTTGCCCTCATTTTTCTGTCACAGGTAGAAGATGACGAAATTGAAGTGCTCTCAAGTTCCTCCCAGGTGATTGTTTTTCTGATAGCTACAGTGTAGTAGATTGGTACATTATGGCCATTGTTCTTGTTGTTGTTGTTGTTGTTATGAGGTTGTGCCTTCCTCCCAGCTAATCCTAACAGCATATGACAGGATAACAATGTGGACGATGATAGCGATGAAGACTGGGCTGAGTGATGTGCAGCTGAAGTTGAAAGGAATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025227