BGIOSGA025231

From RiceWiki
Revision as of 06:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025231| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025231, complete gene.| tag = OS07G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025231

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025231, complete gene.

LocusTag

OS07G0173400

Ensembl Transcript ID

BGIOSGA025231-TA

Ensembl Protein ID

BGIOSGA025231-PA

Length

5815

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3743263..3749077

Sequence Coding Region

3743263..3744279,3744649..3744763,3744860..3744954,3745585..3745823,3746180..3746266
,3746622..3746721,3747563..3747770,3747879..3749077

Genome Context

<gbrowseImage1> name=IndicaChromosome07:3743263..3749077 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:3743263..3749077 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCACCAGAAAATTTGTCCAAGAAAGCAAAACCAAATGCCATTGATCAGGATACATCTCGTCCTTCTCTTGAGAAGCATGGAATAAAGAAGGAAAGGAAAGGGCCTCGTTACACAATGAAGCAGAAGCTCAGGGGTCAGATAAAGGACATTCTTTTAAACAATGGATGGAAAATTGATCTAAGGCGCAGGAAAAACAAAGATTATGAAGATTCTGTCTATGTTTCTCCACAAGGAAATGGCTATTGGTCAATCACTAAGGCTTATGCTGTGTTCCAAGAGCAGTCTAAAAGTGGGAAGCGTACAGGTAAATCATCTAAGCATAAAGCAGGTGTTGCAGATGCTGCCTGTAATGCCATATCAGAAAATGATTTAGCAATGCTACAGAGGAATGTGGTGAAAAGGAGGACCAAGAAAGAACTTGGTGCTTCTAAAAAGAAGTATGAGGACAGCAGCAGCAGGAACTCCAAAGACAACAATGCTGGTAGAAGTTCTGGAAACAAGCATCAAAGCAGTGGAGTTAGGGGATGTGCGCTTCTTGTCCGTGGTAGTACTCATAGCATGGAAGGCAATGTGGACGGCTATGTTCCTTATCGATGGAAGCGGACAGTTTTATCATGGATGATAGATATGGGGGTTGTTTCTGAAGATGCAAAGGTCAAATATATGAATAAGAAGGGCACACGGGCAAGGTTGGAGGGTAGAATTACTAGGGATGGCATTCACTGCGGATGTTGCTCTAAGATTCTCACAGTTGCTAAGTTTGAACTTCATGCTGGTTCAAAAGAGCAGCAGCCCTATGAAAACATCTTTCTGGAAGATGGTGGGGCTACGTTGTCACAATGCTTAGTTGATGCGTGGAAGAAGCAATCACAATCTGAAAAGAAAGGGTTTTACAAGGTAGATCCTGGTGATGATCCGGATGATGATACTTGTGGCATTTGTGGTGATGGTGGCGATTTGCTCTGCTGCGATAACTGCCCTTCAACTTTTCACTTGGCTTGCTTAGGAATCAAGATGCCTTCTGGTGATTGGCATTGCCGTAGCTGTATATGTAGGTTCTGTGGTTCTACCCAAGAAATAACAACATCGTCTGCTGAGTTACTTTCTTGTTTACAGTGTTCAAGGAAATATCATCAAGTTTGTGCACCTGGAACCATGAAAGACTCTGTTAAAGCTGAATCCAATTCCTCAACTGATTGTTTTTGCAGCCCAGGATGTAGAAAGATTTATAAACATCTGAGAAAACTACTTGGGGTAAAGAACGCTATTGAGGCTGGATTTTCCTGGAGCCTGGTTCGCTGTTTTCCTGATAAACTAGCTGCACCTCCCAAAGGGAAAGCTCATTTGATACATTGCAATTCCAAGACAGCTGTTGCTTTCTCAGTTATGGATGAGTGCTTTCTGCCACGTATTGATGAGAGAAGTGGGATTAATATAATCCACAATGTCATATATAACTGTGGGTCAGATTTCAATCGTTTAAATTTTAGTAAGTTCTATACATTTATTCTGGAGCGGGGTGATGAAGTTATATCTGCAGCAGCTGTCAGGATTCATGGAACTGACTTAGCAGAAATGCCATTCATAGGAACAAGGGGCATATATAGGCGCCAAGGGATGTGCCATCGGCTACTCAATGCAATTGAATCGGCCCTTTCCTCCCTGAATGTTCGAAGACTAGTAATACCTGCCATACCTGAATTGCAAAATACCTGGACTACTGTTTTTGGTTTTAAACCTGTTGAACCTTCCAAGAGACAAAAAATCAAGTCTCTGAATATCTTGATTATCCATGGCACTGGTCTTCTAGAGAAGCGGTTGCTTGCAACAGGCACTATTAACCAAGAGAACACTACTGTTAATGATATGATGGATGCTCAAACACATGTTGAAGCAACCGGATCCCGGACACCTGTTCATTCTTCCTGTGAATTACCAGTGGGTGGTGATCCTGATATTAAGCATCATGATGACTCTCATCCTTTAGTTGGGAACTCCAAAGGCTTGACACTTAATCTGCCTTGTGTTCCTGAAGAAAAAACTACAGAATTGACATCTCCAGTATTAGATGTTGTTCAGTGCATGCCTGAATCTGAAAATACTCAAGAAATGAAAAATGGAGAAACAGATGCGACACTGACTTCTGAGGACATAATTGCAGAACAGAAGTATGAAGATAAATCTAATTCCAGTCTTACAGATTCATCTGCTATTCCCATGACAGTGGATCCAGGCTCATGTTCATCCAATGAGACTGTGAAAGGAGAACATCACACATCTAGTGAACCTTCTGTTGAAGCTATTCTAGTAAGAGACAAACCTGAACCTTCCATCTCTTGCAACGTTACCAACCAAGAAGACAAAAACTCTTCCATGGTTCCTGTTGATACGACAGTTCATTTAGCCACTATAGTTGGGAATCATGATATTCAGAATTCAGTGGAAGTCAAAGGTATGGAACATAATACAACTAAGGATCAAACTTTTGTTAGTGCTGTAGCTAATAATGTTGCTACTACTGAAGATCCCAGTGATTCTGTAGCTGACTGTGAAGTGCCAATAGTGAGGTCTATTCAGCAGAAGGATGAGGTTATCGCAGACAAAAATGCTTGCGCAACTATAGATCAAACTGCTGTTGACGATGTAGCTAATAATTTTGTTGCTACCACTGAAAATGACACTGATTCTACAGCTGAACTTGGAGTGTCAATGGAGAGATGTATCCAGCAAAAGGTTGAGGTTATCAAAGACAAAAGTGATTCACGATTGAGAACTTCTATAAGCAAAGTTATGTTGGAGAAATCGGATCAAATGAAGTCTACTGAAAGTGATAGTGTTAAAATGAAGGACATGGCGATTGAGGTGAAAGTCACAGTTGAGAACTTCAGTGAAGCAGGTAAACCAGCTTCAGCGCTTGTCATGTCAAATGACATTAATGGTGAAGTTATGGCTAAGCCTAATCTAACTTGTGGGGATGATCAACTTCATGGAGGGGATGGGACATACAAAAATAGCATGGAAGATGACCTAGCTTCCAGAGAACCTGTTAATGCATGA</cdnaseq>

Protein Sequence

<aaseq>MSPENLSKKAKPNAIDQDTSRPSLEKHGIKKERKGPRYTMKQKLRGQIKDILLNNGWKIDLRRRKNKDYEDSVYVSPQGNGYWSITKAYAVFQEQSKSGKRTGKSSKHKAGVADAACNAISENDLAMLQRNVVKRRTKKELGASKKKYEDSSSRNSKDNNAGRSSGNKHQSSGVRGCALLVRGSTHSMEGNVDGYVPYRWKRTVLSWMIDMGVVSEDAKVKYMNKKGTRARLEGRITRDGIHCGCCSKILTVAKFELHAGSKEQQPYENIFLEDGGATLSQCLVDAWKKQSQSEKKGFYKVDPGDDPDDDTCGICGDGGDLLCCDNCPSTFHLACLGIKMPSGDWHCRSCICRFCGSTQEITTSSAELLSCLQCSRKYHQVCAPGTMKDSVKAESNSSTDCFCSPGCRKIYKHLRKLLGVKNAIEAGFSWSLVRCFPDKLAAPPKGKAHLIHCNSKTAVAFSVMDECFLPRIDERSGINIIHNVIYNCGSDFNRLNFSKFYTFILERGDEVISAAAVRIHGTDLAEMPFIGTRGIYRRQGMCHRLLNAIESALSSLNVRRLVIPAIPELQNTWTTVFGFKPVEPSKRQKIKSLNILIIHGTGLLEKRLLATGTINQENTTVNDMMDAQTHVEATGSRTPVHSSCELPVGGDPDIKHHDDSHPLVGNSKGLTLNLPCVPEEKTTELTSPVLDVVQCMPESENTQEMKNGETDATLTSEDIIAEQKYEDKSNSSLTDSSAIPMTVDPGSCSSNETVKGEHHTSSEPSVEAILVRDKPEPSISCNVTNQEDKNSSMVPVDTTVHLATIVGNHDIQNSVEVKGMEHNTTKDQTFVSAVANNVATTEDPSDSVADCEVPIVRSIQQKDEVIADKNACATIDQTAVDDVANNFVATTENDTDSTAELGVSMERCIQQKVEVIKDKSDSRLRTSISKVMLEKSDQMKSTESDSVKMKDMAIEVKVTVENFSEAGKPASALVMSNDINGEVMAKPNLTCGDDQLHGGDGTYKNSMEDDLASREPVNA</aaseq>

Gene Sequence

<dnaseqindica>1..1017#1387..1501#1598..1692#2323..2561#2918..3004#3360..3459#4301..4508#4617..5815#ATGTCACCAGAAAATTTGTCCAAGAAAGCAAAACCAAATGCCATTGATCAGGATACATCTCGTCCTTCTCTTGAGAAGCATGGAATAAAGAAGGAAAGGAAAGGGCCTCGTTACACAATGAAGCAGAAGCTCAGGGGTCAGATAAAGGACATTCTTTTAAACAATGGATGGAAAATTGATCTAAGGCGCAGGAAAAACAAAGATTATGAAGATTCTGTCTATGTTTCTCCACAAGGAAATGGCTATTGGTCAATCACTAAGGCTTATGCTGTGTTCCAAGAGCAGTCTAAAAGTGGGAAGCGTACAGGTAAATCATCTAAGCATAAAGCAGGTGTTGCAGATGCTGCCTGTAATGCCATATCAGAAAATGATTTAGCAATGCTACAGAGGAATGTGGTGAAAAGGAGGACCAAGAAAGAACTTGGTGCTTCTAAAAAGAAGTATGAGGACAGCAGCAGCAGGAACTCCAAAGACAACAATGCTGGTAGAAGTTCTGGAAACAAGCATCAAAGCAGTGGAGTTAGGGGATGTGCGCTTCTTGTCCGTGGTAGTACTCATAGCATGGAAGGCAATGTGGACGGCTATGTTCCTTATCGATGGAAGCGGACAGTTTTATCATGGATGATAGATATGGGGGTTGTTTCTGAAGATGCAAAGGTCAAATATATGAATAAGAAGGGCACACGGGCAAGGTTGGAGGGTAGAATTACTAGGGATGGCATTCACTGCGGATGTTGCTCTAAGATTCTCACAGTTGCTAAGTTTGAACTTCATGCTGGTTCAAAAGAGCAGCAGCCCTATGAAAACATCTTTCTGGAAGATGGTGGGGCTACGTTGTCACAATGCTTAGTTGATGCGTGGAAGAAGCAATCACAATCTGAAAAGAAAGGGTTTTACAAGGTAGATCCTGGTGATGATCCGGATGATGATACTTGTGGCATTTGTGGTGATGGTGGCGATTTGCTCTGCTGCGATAACTGCCCTTCAACTTTTCACTTGGCTTGCTTAGGAATCAAGGTAAGCATGCATATAATGTTATGTACAGGAGCACTCTTATTGTTTATTTTATAAATAATACACAGGAGAAAGTGCATCCTCTCTTTAGTTGCTCCCTCTGTTGTGTCAAAACTCCAAACTATTTCAGTTCCTCTGAAAAATACAGTAATACACAGCTGACTTAAAACCCCAGCATATTTAGTTCAACAATTATCTGAGAAAGCTATAAGCAATTACATGAATAGCATTTCCTCTAGACGGAGCCTATCAGTTCTTTCCATTAGCTGTTTGTTAGCTATCTAGTATGATAGGCTAATCGTTTAAATGTATCTCTCAGGGTAACATGTCAAGCTTTTGCTGATATTTGCTTTATTCAAACTTCTTCTACAGATGCCTTCTGGTGATTGGCATTGCCGTAGCTGTATATGTAGGTTCTGTGGTTCTACCCAAGAAATAACAACATCGTCTGCTGAGTTACTTTCTTGTTTACAGTGTTCAAGGAAATGTAAGGCTCCTGATATGCACTCTCTCTCTCTCTCTCACACACACACACAAATGTTTCTGTGCTTCGGAAGTATTATCTTAAACAATAATTTTGCAGATCATCAAGTTTGTGCACCTGGAACCATGAAAGACTCTGTTAAAGCTGAATCCAATTCCTCAACTGATTGTTTTTGCAGCCCAGGATGTAGAAAGGTATCATATTTCATTTAATGCTGTTATCTGTTATGGGGAATTGAGGATCTTGTTTGGCATTGGCCTGCATCAGGTTGTCTGTTGTTCGCTAGGTAGCTCCCCTTCAGTTTTATTCTTATAGCAAAACACATCCTGCCAAGAAGCTACTACAAATGGTCAGCACTTACTAAACATTACCTTGTTCATGATTGATTAGCAGCACACACCAAATTTGGACTAAGTTTAAGCTTGCACGATTTTTCTGTTAGGGGTGTTGCAATGTACACATTTCAACCTGGTTAGTGCCCATTAATCCAGAGAAATGATGTTTGATTGCTTCTTTTTGTTGGAATATTTCATATGTTGAATCTCCCAGAGGTGCTGGGATCTGTAACATTGACACCTGGATTTGTGCCCATTAATCCAGTTGAATTGCTATTCCCCTGCTTGCACTCAGAATGTGTTGTTGTTCCCCATGCAACCTCCTACATCATAACGAACCATGAAATTTGCATTTACTGCTCACATGATCTCGACTAGTGATAGAAAATGTTGTACAGATAAAAACTTGCATTTGTTATGTTGATCATGTTTGCTTTGATTGTTGAAATTCATGGACACTAAACTACTCTTTTCATGGAAACAACACAGATTTATAAACATCTGAGAAAACTACTTGGGGTAAAGAACGCTATTGAGGCTGGATTTTCCTGGAGCCTGGTTCGCTGTTTTCCTGATAAACTAGCTGCACCTCCCAAAGGGAAAGCTCATTTGATACATTGCAATTCCAAGACAGCTGTTGCTTTCTCAGTTATGGATGAGTGCTTTCTGCCACGTATTGATGAGAGAAGTGGGATTAATATAATCCACAATGTCATATATAACTGTGGGTAAGTTGCCTTTGCCTTCTTGGTTCATGTAAGAATCAATGCAAATGAAAACCTACTTGGCTTTCTATATGGTTTCCCATAGTTAGCTGCACTTCAAATATACTTGGAAGTTAGTAATGTTACTTTTTTAATCTTCACTGTCAGTCCAAGTTTGTAAGGGCAAGTCAATATAAAAGTTGAGCAGATTGAGTTCATGTCCTGTAGAAAGTTTTATTTTGGAGATCACTATGACAATATTAAAGTTGTTGCAGGGCCTACTATAATTATTTATTACCCATTAGCATAAACTAAGATGTGCTAACATTGTCTTGGATTTTTACATGTTCTCATTGAAATTCTGTGATATACTATTTCAGGTCAGATTTCAATCGTTTAAATTTTAGTAAGTTCTATACATTTATTCTGGAGCGGGGTGATGAAGTTATATCTGCAGCAGCTGTCAGGTAAATTTTATATTCATATGCTCTATGCTCCAACACTTTGAAGCTGTTGGCATTGGTCGCAGGCATCGCCACCTCACGATCTGTTGTGCTCATGATTAATCAACCTAGCATTTGGCTGCAACATATCTATGCATTGAAATTTGTTTAGGATAAGCAGTTAGTCATCTCTTTTTTTTGTTCAAGTTTGGCTTCCAACAGAACTGTTGTTTCGAAAAGAGATTATATTTGCCCCTCACTCTTTAACCAACTGCAACTCCATCCATGATGACATATTGTGCAGCTGGCATACTTAGCCTTCACTTGTTATTGCAAATTCCAATGATAAAATGCTTATTTTTTTCTCTGTGTGAATCAGGATTCATGGAACTGACTTAGCAGAAATGCCATTCATAGGAACAAGGGGCATATATAGGCGCCAAGGGATGTGCCATCGGCTACTCAATGCAATTGAATCGGTAATATGGCGTTTCTTTTCTTCTTTTTTCTGTTTGGAGCTGTGTAAAAGCTGGTTTGTTCCACCAACTACTAAAGATTTCTTGTTTCATCATTTCCAAAGATTTCACATGTAGGTGTAATACTATTGGAAGTATGTGTCCCAATTTTTTCTAGAATTTTTTGTGACATTTGCTACTTGGTGTGCACGGAGTGTGCACGGGAAGCTTGTGTGCATAGGATATATTCCCTTATCCCCCTTATAATAGTTCCAAATCCCCAGTTTAACTGTATGATTGTTGCTGGGAACTGGCGATCCTGCTGTCACTGGGAAATGCTTTTTTCTTAGAGACCTCCCATTTTAGATGTTTTCAATTTTTTACTCTATTTGCTTTGTATGTCGAAATCTGTTGAAATTGTAACTAAAAACGAGAAAATAAAATGAAATGTGACAAGGACTGAGCTTGGTAACTGCCTCCTACCAGGCCCTGTCCCAAGAAACTTGTCCTGAAGGGGCCTTGCTGTCTTGAAAACTTGTTCTAGGTGAACATCATTATATTTGTTGTAACTGTTATGTACGTGCAAAACTATATATGTATTCTCTTATGTCTTTTAAGGTAAATGAGGTGTTGTAGAAAGGTATGAAGTATTACTTCAGATTTAGCTGATGATGATAAAGTGATACTTCGTACTTAGTTGTTTACTTTTCACTTGAAGCTTTAGCTTCATGTTTGAGTTGTACAAACTAGATTTTGATATTGTTGAGCAATATTTTTCCTTGTTTGTTTTGATGTACCAGTGTTTTCTTTGTTTCATTTTCGGACGAGTTTCTAATATTTTCATGGGTAATTTATTGTTTTGTAGGCCCTTTCCTCCCTGAATGTTCGAAGACTAGTAATACCTGCCATACCTGAATTGCAAAATACCTGGACTACTGTTTTTGGTTTTAAACCTGTTGAACCTTCCAAGAGACAAAAAATCAAGTCTCTGAATATCTTGATTATCCATGGCACTGGTCTTCTAGAGAAGCGGTTGCTTGCAACAGGCACTATTAACCAAGAGAACACTACTGGTACAGGCTACCATACCAAATTATCATGAGAATATTCCTTGAATTCTCTTGTTAAGATTATTGTAACAATTCAATTTTATATCTCAAACACTCTTTGTGTTTATGCAGTTAATGATATGATGGATGCTCAAACACATGTTGAAGCAACCGGATCCCGGACACCTGTTCATTCTTCCTGTGAATTACCAGTGGGTGGTGATCCTGATATTAAGCATCATGATGACTCTCATCCTTTAGTTGGGAACTCCAAAGGCTTGACACTTAATCTGCCTTGTGTTCCTGAAGAAAAAACTACAGAATTGACATCTCCAGTATTAGATGTTGTTCAGTGCATGCCTGAATCTGAAAATACTCAAGAAATGAAAAATGGAGAAACAGATGCGACACTGACTTCTGAGGACATAATTGCAGAACAGAAGTATGAAGATAAATCTAATTCCAGTCTTACAGATTCATCTGCTATTCCCATGACAGTGGATCCAGGCTCATGTTCATCCAATGAGACTGTGAAAGGAGAACATCACACATCTAGTGAACCTTCTGTTGAAGCTATTCTAGTAAGAGACAAACCTGAACCTTCCATCTCTTGCAACGTTACCAACCAAGAAGACAAAAACTCTTCCATGGTTCCTGTTGATACGACAGTTCATTTAGCCACTATAGTTGGGAATCATGATATTCAGAATTCAGTGGAAGTCAAAGGTATGGAACATAATACAACTAAGGATCAAACTTTTGTTAGTGCTGTAGCTAATAATGTTGCTACTACTGAAGATCCCAGTGATTCTGTAGCTGACTGTGAAGTGCCAATAGTGAGGTCTATTCAGCAGAAGGATGAGGTTATCGCAGACAAAAATGCTTGCGCAACTATAGATCAAACTGCTGTTGACGATGTAGCTAATAATTTTGTTGCTACCACTGAAAATGACACTGATTCTACAGCTGAACTTGGAGTGTCAATGGAGAGATGTATCCAGCAAAAGGTTGAGGTTATCAAAGACAAAAGTGATTCACGATTGAGAACTTCTATAAGCAAAGTTATGTTGGAGAAATCGGATCAAATGAAGTCTACTGAAAGTGATAGTGTTAAAATGAAGGACATGGCGATTGAGGTGAAAGTCACAGTTGAGAACTTCAGTGAAGCAGGTAAACCAGCTTCAGCGCTTGTCATGTCAAATGACATTAATGGTGAAGTTATGGCTAAGCCTAATCTAACTTGTGGGGATGATCAACTTCATGGAGGGGATGGGACATACAAAAATAGCATGGAAGATGACCTAGCTTCCAGAGAACCTGTTAATGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025231