BGIOSGA025260

From RiceWiki
Revision as of 06:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025260| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025260, complete gene.| tag = OJ1014_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025260

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025260, complete gene.

LocusTag

OJ1014_E09.31

Ensembl Transcript ID

BGIOSGA025260-TA

Ensembl Protein ID

BGIOSGA025260-PA

Length

2400

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4159255..4161654

Sequence Coding Region

4159255..4159413,4159846..4160376,4160476..4161654

Genome Context

<gbrowseImage1> name=IndicaChromosome07:4159255..4161654 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:4159255..4161654 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTTAGCATCTGCAAGCCAGATGACGGGCAATCGCTTCTTGCTAATGTTGAGGCCTCCGATGACCATGCCGCCTTTGATGCCATGGCCACAAGCTCGCGCCGTCCAGCTAGCTTGCGCCCTCTGCGGCACCCCAATGTGACATCCCTTGCACCATTGCCACCACTCCATCGCTGTGTACCACGACAAACCGAGGTGATATTCCCGCCACTTGACTCACCGGACTCCTCCGAGCTGAAGAAGGTTATGTCCATCAGCCTGCCGGCAACACCAACCGGCTTTGCCGCACCTGTTGCCGGTGTCAGTGACTCATCGGGCATAGATCTCCGGAGGCAAGCCATGGCGTCGAACATGACACAAAGGTTACAGCAGCGCTCGCCAACGTCGCAGAGCAACAACGGCCGGCTCACAGACGAGACAACAGCGTTCCAGTCACCCCCGCCTACCCCCGGTGGCGGCCGGTCGTCGATGAGCCGGGACAAACGCTATGATTCATTCAAGACGTGGTCGGGGAGACTCGAGAGGCAGATCAGCCACCTGGCGGGCATCGGGCCGGACATCCCTTCACCTGCAGGGCAAGTCGTGGATGCCGCCATGGATGGTCACCACCATTCTCACACTGTGTCCACGCCCGAGGTTGGCCGCTTCTTTGCCGCACTGGAAGGCCCCGAACTAGACCAACTCAGGTCGGAGGAGGAGCTGGTGCTGCCGGTGGATAGGACATGGCCATTCCTGCTGCGGTTCCCGGTGTCGGCGTTCGGGATCTGCCTTGGGATGGGCAGCCAGGCGATCCTGTGGAAGAGGATCGCGGAGTCGCCGCCGACGACGAGGTACCTGCACGTCGCCGCCGACGTGAACCTCGTGCTGTGGTGGCTCTCCGTCGCGCTCACCTGCGCCGTCTCCGCCGTCTACGCCTGCAAGGTGGTCTTCTTCTTCGAGGCCGTCCGCCGCGAGTACCTCCACCCGGTCAGGGTGAACTTCTTCTTCGCGCCGCTGATCGCCTGCCTCTTCCTCGCCATCGGCGTGCCGCGGTCCGTCGCGGCGTCGACGGCGGCGCTCCCGGCGTGGCTCTGGTACGCGCTCATGGCGCCGATGCTGTGCCTGGAGCTCAAGATCTATGGGCAGTGGATGTCGAGCGGGCAGAGGCGGCTGTCCATGGTGGCGAACCCGTCGAACCACCTGTCCGTCGTCGGCAACTTCGTCGGCGCGCTGCTGGGCGCGTCCATGGGGATCAGGGAGGGCGCCCTGTTCTTCTTCGCCGTCGGCGTGGCGCACTACGTCGTGCTGTTCGTGACGCTGTACCAGCGGCTGCCGACGAACGAGGCGCTGCCGCGGGAGCTGCACCCGGTGTTCTTCCTCTTCGTGGCGACGCCGAGCGTGGCGTCCGTGGCGTGGGCGGCCATCGCCGGCGAGTTCGCGCTCGGCGCGAGGCTCGCCTACTTCGTCGCCATGTTCCTGTACGCGTCGCTCGCCGCGCGCGCCGTCAGCCTCTTCGGCGGGGTCAGGTTCTCGCTGGCGTGGTGGGCGTACACGTTCCCGATGACCAGCGCCGCCGCCGCCACCATCCGCTACGCGGCGGAGGTGGACACCCGCCTCGCCAGGGCGCTCTGCGTCGCGCTCGCCGCCGCCGCCACGCTCACCGTCGGCTGCCTCTTCGCCACCACCGTCGTGCACGCCGTCGTGCTCCGCAGCCTCTTCCCCAACGACGTCGCCATTGCCATCACCGACCACCGCAAGGTGAAGCCCAAGCCCAAGCCCAAGACCACCATGGAGGTGCACTACAAGATGGATGGCAATGGCGACATCGAGTGCGGTGCTCCTGCCATGACGCCATCGCCATGCATGCCGATGGCGACGGCAGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MEVSICKPDDGQSLLANVEASDDHAAFDAMATSSRRPASLRPLRHPNVTSLAPLPPLHRCVPRQTEVIFPPLDSPDSSELKKVMSISLPATPTGFAAPVAGVSDSSGIDLRRQAMASNMTQRLQQRSPTSQSNNGRLTDETTAFQSPPPTPGGGRSSMSRDKRYDSFKTWSGRLERQISHLAGIGPDIPSPAGQVVDAAMDGHHHSHTVSTPEVGRFFAALEGPELDQLRSEEELVLPVDRTWPFLLRFPVSAFGICLGMGSQAILWKRIAESPPTTRYLHVAADVNLVLWWLSVALTCAVSAVYACKVVFFFEAVRREYLHPVRVNFFFAPLIACLFLAIGVPRSVAASTAALPAWLWYALMAPMLCLELKIYGQWMSSGQRRLSMVANPSNHLSVVGNFVGALLGASMGIREGALFFFAVGVAHYVVLFVTLYQRLPTNEALPRELHPVFFLFVATPSVASVAWAAIAGEFALGARLAYFVAMFLYASLAARAVSLFGGVRFSLAWWAYTFPMTSAAAATIRYAAEVDTRLARALCVALAAAATLTVGCLFATTVVHAVVLRSLFPNDVAIAITDHRKVKPKPKPKTTMEVHYKMDGNGDIECGAPAMTPSPCMPMATAA</aaseq>

Gene Sequence

<dnaseqindica>1..159#592..1122#1222..2400#ATGGAGGTTAGCATCTGCAAGCCAGATGACGGGCAATCGCTTCTTGCTAATGTTGAGGCCTCCGATGACCATGCCGCCTTTGATGCCATGGCCACAAGCTCGCGCCGTCCAGCTAGCTTGCGCCCTCTGCGGCACCCCAATGTGACATCCCTTGCACCAGTAAGTCACCTCATACTCAAACTTATTGATCCATTAATTCTGCCATAGCAGACATGAACATGAAAGGGTGGGTGAGACCCTGTTTAGATGGGACTTTTAAGTCCCTATCACATCGGATGTTTGGACACTAATTATAAATATTAAACATAGACTATTAATAAAACACATCCATAATCTTGGACTAATTTGCGAGACGAATCTATTGAGCCTAATTAATCCATGATTAGCCTATGTGATGCTACAGTAAACATTCTCTAATTATGGATTACTTAGGCTTAAAAAATTTGTCTCGCGAATTAGCTTTCATTTATGTAATTAGTTTTGTAAGTAGTCTATATTTAATACTCTAAATTAGTGTCTAAATATAGGGACTAAAGTTAAGTCCCTGGATCCAAACACCACCCGAGTCATTGTCGTTTGTCTTCTTAACAGTTGCCACCACTCCATCGCTGTGTACCACGACAAACCGAGGTGATATTCCCGCCACTTGACTCACCGGACTCCTCCGAGCTGAAGAAGGTTATGTCCATCAGCCTGCCGGCAACACCAACCGGCTTTGCCGCACCTGTTGCCGGTGTCAGTGACTCATCGGGCATAGATCTCCGGAGGCAAGCCATGGCGTCGAACATGACACAAAGGTTACAGCAGCGCTCGCCAACGTCGCAGAGCAACAACGGCCGGCTCACAGACGAGACAACAGCGTTCCAGTCACCCCCGCCTACCCCCGGTGGCGGCCGGTCGTCGATGAGCCGGGACAAACGCTATGATTCATTCAAGACGTGGTCGGGGAGACTCGAGAGGCAGATCAGCCACCTGGCGGGCATCGGGCCGGACATCCCTTCACCTGCAGGGCAAGTCGTGGATGCCGCCATGGATGGTCACCACCATTCTCACACTGTGTCCACGCCCGAGGTTGGCCGCTTCTTTGCCGCACTGGAAGGCCCCGAACTAGACCAACTCAGGGTAAGCTATAGAAAAATAAATGAAACAACCAAAAAATAATTCATATATATATTAGCGGTTTAAAAGCCAATGCTGAAAAATAAGCTACAACTCGTATAGTCGGAGGAGGAGCTGGTGCTGCCGGTGGATAGGACATGGCCATTCCTGCTGCGGTTCCCGGTGTCGGCGTTCGGGATCTGCCTTGGGATGGGCAGCCAGGCGATCCTGTGGAAGAGGATCGCGGAGTCGCCGCCGACGACGAGGTACCTGCACGTCGCCGCCGACGTGAACCTCGTGCTGTGGTGGCTCTCCGTCGCGCTCACCTGCGCCGTCTCCGCCGTCTACGCCTGCAAGGTGGTCTTCTTCTTCGAGGCCGTCCGCCGCGAGTACCTCCACCCGGTCAGGGTGAACTTCTTCTTCGCGCCGCTGATCGCCTGCCTCTTCCTCGCCATCGGCGTGCCGCGGTCCGTCGCGGCGTCGACGGCGGCGCTCCCGGCGTGGCTCTGGTACGCGCTCATGGCGCCGATGCTGTGCCTGGAGCTCAAGATCTATGGGCAGTGGATGTCGAGCGGGCAGAGGCGGCTGTCCATGGTGGCGAACCCGTCGAACCACCTGTCCGTCGTCGGCAACTTCGTCGGCGCGCTGCTGGGCGCGTCCATGGGGATCAGGGAGGGCGCCCTGTTCTTCTTCGCCGTCGGCGTGGCGCACTACGTCGTGCTGTTCGTGACGCTGTACCAGCGGCTGCCGACGAACGAGGCGCTGCCGCGGGAGCTGCACCCGGTGTTCTTCCTCTTCGTGGCGACGCCGAGCGTGGCGTCCGTGGCGTGGGCGGCCATCGCCGGCGAGTTCGCGCTCGGCGCGAGGCTCGCCTACTTCGTCGCCATGTTCCTGTACGCGTCGCTCGCCGCGCGCGCCGTCAGCCTCTTCGGCGGGGTCAGGTTCTCGCTGGCGTGGTGGGCGTACACGTTCCCGATGACCAGCGCCGCCGCCGCCACCATCCGCTACGCGGCGGAGGTGGACACCCGCCTCGCCAGGGCGCTCTGCGTCGCGCTCGCCGCCGCCGCCACGCTCACCGTCGGCTGCCTCTTCGCCACCACCGTCGTGCACGCCGTCGTGCTCCGCAGCCTCTTCCCCAACGACGTCGCCATTGCCATCACCGACCACCGCAAGGTGAAGCCCAAGCCCAAGCCCAAGACCACCATGGAGGTGCACTACAAGATGGATGGCAATGGCGACATCGAGTGCGGTGCTCCTGCCATGACGCCATCGCCATGCATGCCGATGGCGACGGCAGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025260