BGIOSGA025286

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Revision as of 06:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025286| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025286, complete gene.| tag = OJ1339_...")
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Gene Name

BGIOSGA025286

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025286, complete gene.

LocusTag

OJ1339_B08.7

Ensembl Transcript ID

BGIOSGA025286-TA

Ensembl Protein ID

BGIOSGA025286-PA

Length

7571

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4436538..4444108

Sequence Coding Region

4436538..4436716,4437285..4437321,4437517..4437620,4437959..4438154,4439009..4439075
,4439296..4439399,4439744..4439783,4440464..4440518,4441497..4441628
,4442014..4442083,4442500..4442557,4442644..4442699,4442786..4442941
,4443060..4443171,4443253..4443394,4443612..4443687,4443777..4443872
,4443980..4444108

Genome Context

<gbrowseImage1> name=IndicaChromosome07:4436538..4444108 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:4436538..4444108 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGCGGCGGAGCTGTGCGACGCCCTCGCCGCCGCCGGGTTCGACGGCGACGGCCCACTCGATCTGGACAGCTTCGAGTGGCCGTTCCTCCAGGGGGACGACGCCCGCCGCCTTCTCGCCTGGGTTTCCTCCAGGCTCCGCCCCGCCAACGTCTTCTCCGCCACCGACCTCGCCCTGTATGAGCAGTTTGAACTAGAAGGGAAACTTTTGGAGGGGGAGGACTTAGACTTTGCGTTTGACAGTATTTCGGCCTTCTCAGAGACTGGAGAAAACCAGGAAGACACATTTCTGACAGAAGAAAGTCTTGAGCACATCCGTGACTCAAAGCTTACACTCAGAGCTGAAGTTTCTGATTTGGAAAGGCAGCTTGCTTCTCTTGAATGGCAGCTTGATATGCTTACAGCACAAGCTACCACCATTACTCAGGGAAAGAAGTCACGTGTATCTGCTAAAACTAATCCTAATATACAAATTTCAAGATTAGATGAGAAACTTGCTAAGAGAAGTTTAGAGATGAATTCATTACTTGGAAAACTTGCTGCTACCACCCAGGAGTTGTCTTATTATCATTCAGAAGCTGATATTGGAATTTACCTATCATACAGTGACTTCCAGTCTTACATAATCCAAAATTGGGCTTGTATCAAGGAACTAAACAGATGGTTCTCCAAGAAGTTTGAGAAGGGACCTCTCCAATTTGTTGCCAAAGAAGACATGTCAAGAGGATATTATGAAGGGTCACACCATCTTTCTGTTGAACTGAAGCGAATTAATTCCATATTCGCTAGAAGCAAAAGACAGTACATAGAAGCACAAGCAGAATATGCTAAGGAGGAGGCCATACTCTCAACGCTTAGAACCCAATTGGCATCCCAGCAGTCACTTGTTCATCAGGATGTTCATTCTCTAAGGAGGAGAAACTCTGAGTTTGCTGAAGAGCTTAGGGATCTTTCACTTCAAGTGAAGAGATGCCTATCTGAGATTATTACAAGCCTGTGTGCTGACCTTGCTCAACTTGAGGGTGCAAATATTTTGCAAGGGGATCATAATTTGAAGGTTCTGCGTCAGGAATGCTACATAAGCCAGCAGAAAAGGTTCATCAATTATCTGGTTAATCAACTTGCTGCTCATCAGTTTCTAAAGATAGCTTGCCAGATTGAAGGACGGGCAAAAATGTCAAGTGCCTATTCACTGCTAAAAGCAGCAGCAATGGAGCTGCAGGGTTACTTCTCAGTTGTTGATGGCCGTCTGGACCGATATCATTTAATTGGTCAAGCTGCATCTGTAATGCTTGAAGAAGGATCTATTGATGATCGTGATACTTTTCTTCATGCTGTGAGGGATATTCTTAGTACTCACTCAGGTGCTCAAGCAATGACTCCATCATATGTTTCAGCATATGGTTTAGTTGAGCAGATCTCAGATCTGCAAAATGAGCTCGAGTATCTTCATCATGAGCTTGAAAATGTTCTTCCACGTGAACGCAAAAGATGTATCGATGAACTATGCAGGATGATCCAAACACTCGAGCAAATTCTGTCTGTACCATTTACATATGTGCAACCAACATTGACACCATGGCCTGTAGCACAATCGCTTGAAGAATTGGAAATAATCGACCAGCAAGTCTCTGCTTGTGTTAACGAAGTAACGATGGCTCGAGATAAAAAGGCCAAGATGTTACAACAACCTTCGCGCAATGTGCAGCAGGAAAGACGAGTATTTGTCGATTTCTTCTGCCACCCAGGACGGCTTGAGAATCAAGTCAGAGAGATGAGTTCCCATGTTAGAGCACTCCAAGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSAAELCDALAAAGFDGDGPLDLDSFEWPFLQGDDARRLLAWVSSRLRPANVFSATDLALYEQFELEGKLLEGEDLDFAFDSISAFSETGENQEDTFLTEESLEHIRDSKLTLRAEVSDLERQLASLEWQLDMLTAQATTITQGKKSRVSAKTNPNIQISRLDEKLAKRSLEMNSLLGKLAATTQELSYYHSEADIGIYLSYSDFQSYIIQNWACIKELNRWFSKKFEKGPLQFVAKEDMSRGYYEGSHHLSVELKRINSIFARSKRQYIEAQAEYAKEEAILSTLRTQLASQQSLVHQDVHSLRRRNSEFAEELRDLSLQVKRCLSEIITSLCADLAQLEGANILQGDHNLKVLRQECYISQQKRFINYLVNQLAAHQFLKIACQIEGRAKMSSAYSLLKAAAMELQGYFSVVDGRLDRYHLIGQAASVMLEEGSIDDRDTFLHAVRDILSTHSGAQAMTPSYVSAYGLVEQISDLQNELEYLHHELENVLPRERKRCIDELCRMIQTLEQILSVPFTYVQPTLTPWPVAQSLEELEIIDQQVSACVNEVTMARDKKAKMLQQPSRNVQQERRVFVDFFCHPGRLENQVREMSSHVRALQE</aaseq>

Gene Sequence

<dnaseqindica>1..179#748..784#980..1083#1422..1617#2472..2538#2759..2862#3207..3246#3927..3981#4960..5091#5477..5546#5963..6020#6107..6162#6249..6404#6523..6634#6716..6857#7075..7150#7240..7335#7443..7571#ATGAGCGCGGCGGAGCTGTGCGACGCCCTCGCCGCCGCCGGGTTCGACGGCGACGGCCCACTCGATCTGGACAGCTTCGAGTGGCCGTTCCTCCAGGGGGACGACGCCCGCCGCCTTCTCGCCTGGGTTTCCTCCAGGCTCCGCCCCGCCAACGTCTTCTCCGCCACCGACCTCGCCCTGTACCACTCCCCATCGCTCGATCCCCTCCCCCCTCCCCCCCCCCCCCCCACGAAATTCTCTCTGATCGTCGCGTTCTAGATGTTTTGGGGGGGCGTTTTTTCGGAATTACGCTTGGTTTTGGGGGGGTTGATTGATTCGAACGGGATGGAGAGGGTATGGTATGGGTGTAATTGTTTGGAGGTTTGAGGGGTTGGATGAACTCTGGTGTGTGCTGGGATGCGAAATGGTGATGGGCAAATCGGAGTTGTTTTTGAAACTTGAGGAGGAGAAGGGCTTTGATGAGAAAAGGCGCAGCACTGCACATGCTTTCTGAAGTTTGATGGACAAATGTGTAGTATAAAGTACTATAAACCATAGAAGTCAGAAGTTGCATGACACTATCTAGTTAAGGTTGTAGGTGTAATTATACTATGAGAGCTGGTTTAGTTGGATCAATTGCACGTTACCAACTTATGATAATATGAATTGTAGTATTACACAATGTTTTTTTGTTACTGCGTAACGATTTCTGATGATGCTTATAAAGCTTAATTATAAATTGGTGATCTTTTTTTTTTTTAAATGCAGGTATGAGCAGTTTGAACTAGAAGGGAAACTTTTGGAGGTATAGAGCTTTTTGGTTTCTTTGTTTGATAAACTTAAATACTTGGACTGTGAGTTACATGTGATAGTTATTAGTTAGGCGAAAACCATGTTGGTTAACAAAATTTACTGGTATGATTAGTCTTGTTTTCACTTATCGCAATGTATTAGCTCTATCTAGTGAGTGGCATGCTGCTAATTGAGCACCGACTTTTAGGGGGAGGACTTAGACTTTGCGTTTGACAGTATTTCGGCCTTCTCAGAGACTGGAGAAAACCAGGAAGACACATTTCTGACAGAAGAAAGTCTTGAGCACATCCGGTATGTCATATCTCGTCTTACACAGGAAAAGCATTCGATGCTCCTCTTGTTTGGATCTGCATATGTAGTTTTCCACCTTCTGTTGTGATGTTTACAGATTACAAGTATAAATATTTATTTGGTTTAACACGTGTTATAAAATGGCATCATTCCCTAATTTATTTGGTCTAGATGCTTTGGTAAAACTGAACTCCTACATTGAGAGTGATTGACAGATGGTTCTGTCAGTGGTAGCGCAGCCCCACATGATTCGCTCCATGTCAACACCTAGTCTTATCTCGTTACCCTGCTGTTTTGATCTCTTCATTGACATAGGATTTTCTGATTATTTGTTACAGTGACTCAAAGCTTACACTCAGAGCTGAAGTTTCTGATTTGGAAAGGCAGCTTGCTTCTCTTGAATGGCAGCTTGATATGCTTACAGCACAAGCTACCACCATTACTCAGGGAAAGAAGTCACGTGTATCTGCTAAAACTAATCCTAATATACAAATTTCAAGATTAGATGAGAAACTTGCTAAGAGAAGTTTAGAGGTAAAATGTTCCTTTGTTTTATCATCCAAATCAGAGGCCACATTACTGTATTCTACTGTTCTTGGCTGTATTTTCATGAGATAGATGGAACTGAAATATGCTTTTCATATTACACCATGATACTCATGTCTGGCTTTAGAACCTGTCACCTATCTAGCCTATAATCGGTTGGAACATGATAGTGTTTGATAACTAACCAGACCAGTAGACTTTATGATCTAATGGCCTAGGGCTATCAGTGTTATCTGATCGTCTGATTAATCGTGATTAATTGTCCTGATCGGTCCCCTAACTCTGATCAGGGACATTCATTTGATCAGCTCGATCAGAAATCTGATCGTCCGATTAATCGTCCGATCAGAGCACCTATCAATCACTTTTAGAACTAGTCTTAAGGTTTAGCACATGTGAATATGTGCTACTACTGCTAGTTGCTTTATACTAGGGCAAGTGAGTGACCATCTTGCCATCAAGTATTAGTACTGTGATTGGTTTATACTATGCACTATATAGAATATAGGTTCTGGTATACATAGTACCAATCAGGTCGATTAATCAAGGCTGATCTATGATCAATCGTCCTGATCGGTCCCTTGGCGATCAGGATCTATCAGCGATCAGATATTGAAGGCTATAACCGTAGATGCGAAAAAAGGAAAGCGTTCACTGGGCTGTTTGTTTTCACAGATTTTTATGCATGTTGATGTTCTGTTTTATGGCATAATCAACACTCCATGACTAATGTGAATTAAAATATATGGTACTCTCTAGCCTGTTTGTTCAGTGTTGTGCATCATAAAGAAGGTTGTCCCTCAGATATTTTATTTTTCCTTTTGTTTTTGTAATCCTAGCAGATGAATTCATTACTTGGAAAACTTGCTGCTACCACCCAGGAGTTGTCTTATTATCATTCAGAAGCTGGTATTCCTGCTGTCTTTCACATGCAGTTATATAAAGATTACATTCATCTTATCAGACTGCATTACTGATATTAAAATGTGCAGAAAGCCTGATAACTCCATTTTGACTTGCATCTATGCACATAGAGATACTGAAATAAAGCTCATCATATGAATCCGATGCTTGTTTTTATTTCTTATTATTCTTCTGAATACATTTTGTCTTCCACCTTTCCTCACAGATATTGGAATTTACCTATCATACAGTGACTTCCAGTCTTACATAATCCAAAATTGGGCTTGTATCAAGGAACTAAACAGATGGTTCTCCAAGAAGTTTGAGAAGGTATTAACTTATTTTATGCCTAAAGGGACAAACATAGTGTTGGACTGTTGGGACGTATCTTGATACTTGAACATGCAAAGGCGAGCTTATTTGATCCTACACAAGAATTATTAAAGTGAACTCAAGGTCATTGTCCCTTATTTTTCTATTTGATGTGATTCATATCTCATATGTTGATAAATACTATAAAAGACTGTAGTATGTTAATTTGTTTTCTTATACAGTAAATTAAATGTGTAATTATGATAAATTGCCAAAGTAAATTAATCTTAAATTCACAATTTAGCTATAACCTTTATTTATCATCTGCTGATTTTTTTTTTGGGTGGGGATTTGTCAACCAGGGACCTCTCCAATTTGTTGCCAAAGAAGACATGTCAAGAGGTGAGGGTTTAATTGTTTAGTAGTCATCATGCATGTAGTTTCTCCATACCATACATTTCACATTCAATACTTGTTCTTGTGTCTGCATAATGTTTTTGGAGAAAGATACCTTGATTCTCAGCAATATATTACTTTTTATGTGAAATGTTAGAAGTTCAAATTTTGCATGGACACATGTTATTAAACAAATGCGAACAGGTCCTGTTATTTTATTCGATAACTCAAGCTTCCTGGTAAAAGGATCATGATTAGGTAACCATATAGATTTCCTATTTTTGTGCCTGAAGAATTTGTGCCGTTCAATTTTACCATAAAAATTCTGTCTTCTTCACTGAGTAAGCTAAACTGGCTTAAATTGACCTTGAACCATGGTAGGAGATATTATGCATGTCCTTAAATTGATGTTAGTATACATATTTGTCCAACTGCTTCTCTTAAAAAATTGAAAATATAAGAGTGGTCTTTCTCCCTTAGAGGGTGCAGGAGGGTCATTGTAAACGAAGGGTTTGATATCGTTCTTCTCCACTGGTTTCATGGTTCACTTTGCTGCTATGTACTATGCACTGTTGATATGTTTATTAATATGTATACTTGGGTTAGGTATTCAATATGAGGTTTAACAACTTTAGGCAGAGATGAATTAGAAAACAGCCAATTTTCCATTCATCTTGTTTGCGCAGGATATTATGAAGGGTCACACCATCTTTCTGTTGAACTGAAGCGAATTAATTCCATGTAAGTATTTATTAGTCTTTGGATGTCACCGTTCTACCCTTTTTTGTCTTTCTATTGCATATCACTTCTTCATGTTACAGGACTATCCCATTTGTCTTTCCATTAGGGAAAAAAAAACTACAAAAAAAACTGTGCCATGGGGGGAAAAAAAACTGTGCCATGGGTCGTCACCTGTCCTGCCTCTAGAGATTCAAGTGGCCCACCTAATGTCTTATACGTGGGTCAGTGGGCCAGCCCACCTGCAGGCCACAACCCTACTCTCTGTGTTAGGACTTCTTTTTTTGAATATTAGTTCTGCAAAAGTGATGCAAATTCATTATGAAATTCAATGAACTCTGCCTTCTGATGAATACACCTTGTGTTGTTGTAGTTCTATAAGGTATTTCTTTAGCTCATTTATTAGTTAGTTCTTCTTCAAATGGATCAACCTTTTGTTTTTGACAAAAACAAATGGATCAACCTTCCAAACACCCACTTCCCAAACTTTGTTAACAATATGCTTAAGGTAGAAAACTTCTGACCTGATTACCCCTATTAAATCTGTTTTATCTCTAATTTAGCCTCCAAGTCTCCAACTTCCTCAGTCATTCAGGTGTTTTGGCATGGCAGGCAGCTTCATACGAGGTGGTCAAGCTCAAGGGCATTCATATCTATTAGCATTTAATAAGGGTAATTAGGAAAAAAAGTACCTAGAAAACCTAAAAACAAAATCTATTTTAGGAAAAAATCAACATCGTAAAAAGTCATAAAAAACGGAAGGAGTATTTAGGCATAGCAATCCCCCCTATCATTATGAGAGTTGTCTTGTTCATTTATCTTTCCTACTTTGTTGTAAAGTTCATAAAAGAGTTAACATAACAATGCATAGAATTACTTAATATGCTTCATATAGTCACATAACATCATTTTTTTACATTTTATTTGATATTTTAAGATGCATGATTATTGTTATGCTGATGCTTGGTTATTTGTTAACAGATTCGCTAGAAGCAAAAGACAGTACATAGAAGCACAAGCAGAATATGCTAAGGAGGAGGCCATACTCTCAACGCTTAGAACCCAATTGGCATCCCAGCAGTCACTTGTTCATCAGGATGTTCATTCTCTAAGGTATGCAAGACATGGATAATCATAGCTACTTTATTATTTTCTAAAAAAAAAAGCTGTACTGAAATAGCACAGCATCATTATTTTGAGCTGAAACTTTTGAGAACATGGTACTATCCTTATGGGACACCTCTAAATGAAACAGCTTGGTTCCATTGTATTATAATGACATATATTTTTTTAAAAAAAGTAGATTGAACGAAATCTACCAGAAAGCGCTTCATCTTTTTATGAGAACATTTAGGTTGTATGGATTGTTTATTTATTGTATGGTAGTACTTGAACAAACCTTTGTACATGTGATGTTTCGGAAAATTTTCACATTTCATTAATTAAGTATCTGCTTTTATTTTTCTTTTTTTTTTTGGATTTGCCATGTCATCCTCAGGAGGAGAAACTCTGAGTTTGCTGAAGAGCTTAGGGATCTTTCACTTCAAGTGAAGAGATGCCTATCTGAGGTAAATTATTATGTACATGAAATTTGGTTTTTAATGTACCATGGATAAGCAAATGGTTTATCTCAGACGCTTCAGAGTTCTTTAATTAATTGCATTCTGTGATACCTTGGGTCAATGATGTATTCCTATGAAGCACACTTTATCAACATGGTGTCACAGCCCCGGCAAAATAATAAAAAGAATGTACAGTTACGCTAAAGATTGCTCCAAAAATGCAAACTACAGAAAACTGACATGTTCACTGGTTTGTCTTTGCAATTATGTATCTGTCACCCCTTCTTCAATTTACTCTGTTCCTGCTGCTTATAGCCAATTTTAATGTCATTTTCATCCGTTTGGCTATCTTATGCATTAACTGTGACATATTATTTTCTTTGTGAGTAACATAAAAAAATAATGTTTTTTTTTAACTTTAGATTATTACAAGCCTGTGTGCTGACCTTGCTCAACTTGAGGGTGCAAATATTTTGCAAGGTGTGATCTTCTCATGAATCATCATTTGAAAATGCTTTGCTCTGTTGCGGCAATATAATTGCATGTTCCTTACTGTGACCTTCCAGGGGATCATAATTTGAAGGTTCTGCGTCAGGAATGCTACATAAGCCAGCAGAAAAGGGTATCTTTTGAACAGTCAGTTGTTTTGGTGCAAACCTATTTCCTACATAAATAGGTAGTCACTGAGGCATTTCTTCATTCTTGCAGTTCATCAATTATCTGGTTAATCAACTTGCTGCTCATCAGTTTCTAAAGATAGCTTGCCAGATTGAAGGACGGGCAAAAATGTCAAGTGCCTATTCACTGCTAAAAGCAGCAGCAATGGAGCTGCAGGGTTACTTCTCAGTTGTTGATGGCCGTCTGGTATTGCTTTCTGATGTTATATTTTTATTTGAGAGTACATTTTGTTGGTTAGCCTCTTATCATTATCCACTTTGTGTACATTCTTACAAAATATAGTCTGTACTGCACAAATGCATAGGACCGATATCATTTAATTGGTCAAGCTGCATCTGTAATGCTTGAAGAAGGATCTATTGATGATCGTGATACTTTTCTTCATGCTGTGAGGGATATTCTTAGTACTCACTCAGGTGAGCACACATAGGTTGTAAATTGTATCCACATTCTGTACCAGAAGTTGAACAATTCATTCCCCTTCCAATTTTCTGCAGGTGCTCAAGCAATGACTCCATCATATGTTTCAGCATATGGTTTAGTTGAGCAGATCTCAGATCTGCAAAATGAGCTCGAGTATCTTCATCATGAGCTTGAAAATGTTCTTCCACGTGAACGCAAAAGATGTATCGATGAACTGTGAGTAATATTCGCATATTGTTTCCTGAAACTTTTCCCCTTGATAAATTTGACCATTTTCTGTGCACTGTGTAGTTGAACTGTTGAATCTCCTTTACTGTGAATTATCAACAGGAGAAATGTGTTAACGTTGAACTTTGCATTCACCAACACCTATTGATAGGACTGTTAGATCTTTGGTTCAATCATTACCCATGCTTTCTCCATTCCTTTGCAGATGCAGGATGATCCAAACACTCGAGCAAATTCTGTCTGTACCATTTACATATGTGCAACCAACATTGACACCATGGGTACATTCCTTCTCATATGTCCCTACTCATCCATGCCACTTCGTAGTTTGTTCTGATGTACTACTTTACTTGTGCATGATTTATCACAGCCTGTAGCACAATCGCTTGAAGAATTGGAAATAATCGACCAGCAAGTCTCTGCTTGTGTTAACGAAGTAACGATGGCTCGAGATAAAAAGGCCAAGGTACTTTTCATCTGTTACTTCCTCACATTGGTAGTGTTCAACAGCTTTAGGTAGTTTCTGCATGTTGATTGAGAAGTCATGCTCTCAAATTTACAAATGGTTTGCAGATGTTACAACAACCTTCGCGCAATGTGCAGCAGGAAAGACGAGTATTTGTCGATTTCTTCTGCCACCCAGGACGGCTTGAGAATCAAGTCAGAGAGATGAGTTCCCATGTTAGAGCACTCCAAGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025286