BGIOSGA025295

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Revision as of 06:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025295| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025295, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA025295

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025295, complete gene.

LocusTag

OSJNBB0084L07.11

Ensembl Transcript ID

BGIOSGA025295-TA

Ensembl Protein ID

BGIOSGA025295-PA

Length

4544

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4571398..4575941

Sequence Coding Region

4571398..4571571,4571692..4571792,4572515..4572647,4573022..4573113,4573408..4573507
,4573595..4573667,4573749..4573869,4574332..4574451,4575607..4575677
,4575763..4575941

Genome Context

<gbrowseImage1> name=IndicaChromosome07:4571398..4575941 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:4571398..4575941 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGGCGGCGGAGGTGGCGAGGGGAAGGTGGCGTGCGCGGCGTGGATCCGGCGCCGGGAGGAGAAGGAGAAGGCGACGCGCGTCTTCGCGGCGTACGGGCGGGCGGGGTCGCCGCCGGCCGTGGAGGTGCTCGGGTTCGACTCCAAGGAGTGCTCCCTCTCCGAACCCCTGGCGAGGGCGGAGCTCGGGGAGGAGCCGGGCGACGCGCCGCGTGGCATCACGGTGCACCCCAGCGGCGACGAGCTCGTCTGCGCCACGGCCAAGGGGTGCAGGTTATTCAAGCTGATTTTTGAAGAGTTCACTGTTCGACTTATTTCAAGAGACGCTCCACCACTTGAATCCGTTGGACCGCAGAAGTGTCTTGCTTTTAGCACTGATGGATCTAAATTTGCCATTGGTGGTGAGGATGGGCATCTCAGAATATTTCATTGGCCGAGCATGAATGTGCTCTTAGATGAACCCAAGGCTCATAAGTCCTTCCGGGACATGGATATCAGCTTAGATTCAGAATTTTTAGTTTCCACATCCACTGATGGTTCTGCAAGAATATGGAAGATAGATGAGGGGGTACCATTGGTCAATTTGACTCGATCTGCGGATGAGAAGATTGAATGTTGCCGCTTTTCTAGGGATGGCATGAAACCATTCCTGTTTTGCACCGTTGCAAAAGGTAACAAAGTTGTAACTGTTGTCTGGAACATAAGTGACTGGAGTCGAATTGGATACAAGAGACTTCTGGGAAAACCTATCTCCACACTTTCAGTTAGCATGGATGGGAAGTATCTGGCTTTGGGGAGCCATGATGGTGATTTCTGTGCTGTGGATGTAAAGAAGATGGATGTTTCTCACTGGAGCAAGAAGGTCCATCTTGGTTCTCCGGTTTCCTCAATTGAATTTTGTCCTACTGAAAGGGCCGTAATCTCCACATCGCATCAATGGGGAGCAGAGCTGACAAAGCTGAATGTCCCTGCTGACTGGAAAGAATGGCAAGTCTGGCTCATACTCTTATCTCTTTTCCTAGTGTCAGCCATCCTGTTCTATATGTTCTACGAGCGCTCCGATTCCTTCTGGAACTTTCCAATGGGGCAGCATCAGCCAGCCAAGCCATGGAGTGTCATGAAGGAGTCTCCTCCAGTTCCTGAGGACCAGAACCCCTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGGGGGEGKVACAAWIRRREEKEKATRVFAAYGRAGSPPAVEVLGFDSKECSLSEPLARAELGEEPGDAPRGITVHPSGDELVCATAKGCRLFKLIFEEFTVRLISRDAPPLESVGPQKCLAFSTDGSKFAIGGEDGHLRIFHWPSMNVLLDEPKAHKSFRDMDISLDSEFLVSTSTDGSARIWKIDEGVPLVNLTRSADEKIECCRFSRDGMKPFLFCTVAKGNKVVTVVWNISDWSRIGYKRLLGKPISTLSVSMDGKYLALGSHDGDFCAVDVKKMDVSHWSKKVHLGSPVSSIEFCPTERAVISTSHQWGAELTKLNVPADWKEWQVWLILLSLFLVSAILFYMFYERSDSFWNFPMGQHQPAKPWSVMKESPPVPEDQNPW</aaseq>

Gene Sequence

<dnaseqindica>1..174#295..395#1118..1250#1625..1716#2011..2110#2198..2270#2352..2472#2935..3054#4210..4280#4366..4544#ATGGCAGGCGGCGGAGGTGGCGAGGGGAAGGTGGCGTGCGCGGCGTGGATCCGGCGCCGGGAGGAGAAGGAGAAGGCGACGCGCGTCTTCGCGGCGTACGGGCGGGCGGGGTCGCCGCCGGCCGTGGAGGTGCTCGGGTTCGACTCCAAGGAGTGCTCCCTCTCCGAACCCCTGGTACGTACGGGAGCTCCCCCCTCTCCTCCTCCTCCTCCGAGCTCCCAAGGAATTCGAGGTTTGGTTCGCCGGCTTGACTTCCGGGGTCGTGGTTGTGTGGTTTGTTTGTTTGTGCTGCAGGCGAGGGCGGAGCTCGGGGAGGAGCCGGGCGACGCGCCGCGTGGCATCACGGTGCACCCCAGCGGCGACGAGCTCGTCTGCGCCACGGCCAAGGGGTGCAGGTGCGTGCCTCCACTGCTTCTCTTCTCGTTGACTGTTCTATCATTCGCGGGAATTTCTCAGGCGGGGAGGGGAGGGGTGATATGATTAGTTAGGAGTTCGGTGTTCTACCGGTAGATTATTGAGCTAATGCCTGTGTAGTGTCGGAGATTTCGGATTATTAGTTCGATTCAGCTGATTTGAGGGTGGTAATTTGGTTAATTGTGATGCGGGAGCTGGTTTGGTTGCTGCTGGCTGCCTGGCTGGATTAGGTGATTTAGAAAGCAGTGTGAATCCGTCTGTTTAGACTTCAGATTGTAGAGGTCTGTGTTATCAATGTGGCTAATAATGTTTAGATTGTAGTGCGGAATTGACTTTCTGTGTTCATTTGATCATTTGCTGTTCCAGTAACGTTCAATTAGGCTTTACACTTCAGGTTTTCTATAGAAGTGTTGGCTTGGATGTTGCAACCTAAAATAAAAAGGGCCACCGAAGTTGATCTTTAGTAGGGTTAACTACCTCAATGAAATGATCATTAGAATAGCACACATGTTGACTTGTTAATCAAATTATAAATGCACAGTATATATATATAATTCCATGCCATTTTGTACTTTTTAGTTCTGATTGTGTTATCATTTTATCAAAGCCTTCTGTTTGCACTGTTACAACCTGCTTTCTCTTTTTTCTGTTCTCTTTCACTAAGACTAGAACTTTATAATTAAACCACATGTTTGAACTGAAGGTTATTCAAGCTGATTTTTGAAGAGTTCACTGTTCGACTTATTTCAAGAGACGCTCCACCACTTGAATCCGTTGGACCGCAGAAGTGTCTTGCTTTTAGCACTGATGGATCTAAATTTGCCATTGGTGGTGAGGTATCGGATTGCTATATGTTGATATTGGAGTTTTACTGATCAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTTTCTAGTTTGCTTCTATTTGGTGATTATGTATTTCCATATGCTGCATTTATACATCGTTAAGAAGTACTATATGTGTATTATAGAAGCCATGTGATTTTAGGCACAATATCCACTGTTGTACCATTCTGTCAGATTATTCCATCCAGAATTCCAGATGGTTCAGTTTTTTATGGACTGGTGTTATTGCCCAGTGTATTTAGTTTGATAATAATGCTGCTCTCTAGCTGAACTTGTACAAAGTATCTTTCTATGGTTCTTACAATGCTTTATTTTATTTTTACCACTATAGGATGGGCATCTCAGAATATTTCATTGGCCGAGCATGAATGTGCTCTTAGATGAACCCAAGGCTCATAAGTCCTTCCGGGACATGGATATCAGGTTAGGGCAAGTGCAAGCATAATTATTTTCCTTTATTATTTGCAAAAGAATCCCAGGATATTCTCATCTGTTGAACAAGTGTTGTTGTAAATGGCGCAATCATGTAGCCGTTATCTTGAGAGAGTAACCAAGAACTTTGATAACGTAGCAGTAGTGTTGGTCCAAACCTTAATGAAGCATTTTGGTCTTGGAAGACTCTTTTTTAGACCGAAGCGATTCTTTGAACCTTTGGCTTTCGTCCCTGTGCTTTATTGTGAATTGACTTTTGCAATACTGCTGCTTTTCCTCTTGTAGCTTAGATTCAGAATTTTTAGTTTCCACATCCACTGATGGTTCTGCAAGAATATGGAAGATAGATGAGGGGGTACCATTGGTCAATTTGACTCGATCTGCGGTATGATGCGATAAATTTGTGCAAGTCATGTTCTCTTGTTGAGATACTGAAAGCCTTAACCATTTGGTGTTCTGGTTTTCTATGCAGGATGAGAAGATTGAATGTTGCCGCTTTTCTAGGGATGGCATGAAACCATTCCTGTTTTGCACCGTTGCAAAAGGTATACTTTCTATTGTGGTCCAGAAATAGATTTATGCATATCAGATGATTTTTCTATATATGTGCTTTGTCATTGGAACAGGTAACAAAGTTGTAACTGTTGTCTGGAACATAAGTGACTGGAGTCGAATTGGATACAAGAGACTTCTGGGAAAACCTATCTCCACACTTTCAGTTAGCATGGATGGGAAGTATCTGGCTTTGTAAGTACATATAAATATTGTTGATCTTATCATACTGAACAACAAGTATATAACTCCATTGCATTTCTAGGAACATTTACAATGCCAAATTTCAAGACTAACATAAGCTACTTTCTCCTAGTAACTTCACTATTTTGTCCTTTTTGAAGAGCTCAAAAACTTGCTTGCATTTTTTTGTTACATTCTCACATTGACATGTAATATATCAACAACTTGAAACAACTGTCACATAAATAATAACAAAGAATTACTCTAGTTGACAAGGATGTTGCGTAGCTCTGAAAAAAATGGACGAAAAACATTAACATTATAAATTGTAATAGTGACAGTATCAGCTGGAGTAATGTTTTTTTCCTAATAAATATGCAGTGCCCCAATACTAGCTAACATATTCTAAACTGAATTGCTTTTGATGTATTTAGTGCACCGACATGTGAATGAATTCTGTATTTCTTCTTTCAGGGGGAGCCATGATGGTGATTTCTGTGCTGTGGATGTAAAGAAGATGGATGTTTCTCACTGGAGCAAGAAGGTCCATCTTGGTTCTCCGGTTTCCTCAATTGAATTTTGTCCTACTGAAAGGTACTGGAACTCTGTAAAGATGGCATGTTTATCACATCTTGAATCTTATGGATTTCTAGTTTGTTGTACACTGCTGTTGTACTGATTTCTAGTAAGGTAGTAGCTTAGTGTTCACTGGCATGTAGGCGCCATAATGTCAGACTCATGGTTGTTAAGGCGTCGCTATGGCGTCGCTATAGCACTAGGGCGTGCCGAGGGGTTAAGGCGTCCCTCCGCCTTAAGGGCTTAACGCCATAACCCAGAGAGAGAGAGAAAGAGAGAGGTGAAGGCAGCAGCAACTACCCCTTTTCACTGTTCTCTGCTCCATGTCATTGCCATCTTACTCCTCAGCTCTGGTTTCCACTCTCTTCCTCTCTCTCCTGTGCCATATTCATTTTGACTAAGGGAGCAGCGCCAGATCTATCCAAGGGAAGAGAAGCATAGCTGGATTCGTTCTGAATGAGGGGAGAAAAGAGCACATATAGAGGAGCAGAGCTAGCACGAGGAAAAAGATCAGGGGAGAAAGGAGCACATATAGAAGAGCAGAGCTAGCACGAGGAAGAAGAACTGGCGCGAGGAAGAAGCGATGCACAGGCGTGAGGAAGAAGCGACATCGGAGGCGGCGCTGTGAGAGGAGAGACGCACCTGGTGTGGGTATTAGGGTTGTTTCCTTGACCATGGGCTGGTATGAAGGTTATTGGGCTTTTGTGGGCTGGCCTGCTAGGCTAATTTTCTCTCTCCCTCTTCTGATCGCTGCTAATCACGTAGATTAAGGCGTCGCCACGCCTTAGCGCTTTACCGCTATAGCGTAAGGCGTGGGTGGGTCGCCTTACCGCCTTAACAACCATGGTCAGACTATCAAATGCCATGCTTATAAGTTATAAATCAATGCTTCATAGATTGTAATTGTCTGTGTATGCCTGCAGGCTGCGCTGCATAATGTCTTAAGTGGGATGTGAGTCTGAATGTTCATCTTTTACTAAATTTGCTTTAGTTTAGCCTGGAAAAGATTGCAAGATAACATCTTCCTCCTGCTGGGTTTGGTAGGGATGGCCCTTATGCATTTCATTTATTCATGCAAGAAATGTTTCTCTTAAAACTAAATGACCTGTCCTTCTCCAATTTCCGGAGCATCTCTTTGTTTATGTTATAACATGATGCCTGCTGATACCGCAGGGCCGTAATCTCCACATCGCATCAATGGGGAGCAGAGCTGACAAAGCTGAATGTCCCTGCTGACTGGAAAGGTACATGTCTCATAAAATGCTTCTTGGCTCTCCTGTGGTATAATTTACCATACTAACGTAATCTTTTTGTGTTATTCTTCTGCAGAATGGCAAGTCTGGCTCATACTCTTATCTCTTTTCCTAGTGTCAGCCATCCTGTTCTATATGTTCTACGAGCGCTCCGATTCCTTCTGGAACTTTCCAATGGGGCAGCATCAGCCAGCCAAGCCATGGAGTGTCATGAAGGAGTCTCCTCCAGTTCCTGAGGACCAGAACCCCTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025295