BGIOSGA025304

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Revision as of 06:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025304| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025304, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA025304

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025304, complete gene.

LocusTag

OSJNBB0002L09.31

Ensembl Transcript ID

BGIOSGA025304-TA

Ensembl Protein ID

BGIOSGA025304-PA

Length

2714

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4700448..4703161

Sequence Coding Region

4700448..4700525,4700628..4702259,4702369..4702653,4703015..4703161

Genome Context

<gbrowseImage1> name=IndicaChromosome07:4700448..4703161 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:4700448..4703161 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCCAGGCATCGTCGTCGCCGTCCATGTTCCGCGCGATCCCGACGAACACCAACGCTTCTTGCCGGCGAAAGTTGCAGGTCAGGGCGAGCGCAGCGGCGGCGGCGGCGAACGGCGGCGGGGATGGGAAGGTGATGATGAGGAAGGAGGCGGCGTCGGGCGCGTGGAAGATCGACTACTCCGGCGAGAAGCCGGCGACGCCTCTGCTTGACACGGTGAACTACCCGGTCCACATGAAGAACCTCTCGACGCCGGAGCTGGAGCAGCTGGCGGCGGAGCTCCGGGCGGAGATCGTGCACACGGTGTCCAAGACCGGGGGCCACCTGAGCTCCAGCCTGGGCGTCGTCGAGCTCGCCGTGGCGCTGCACCACGTGTTCGACACGCCGGAGGACAAGATCATCTGGGACGTCGGGCACCAGGCGTACCCGCACAAGATCCTGACGGGGCGGCGTTCGCGGATGCACACCATCCGGCAGACCTCCGGGCTCGCCGGGTTCCCGAAGCGCGACGAGAGCGCGCACGACGCGTTCGGCGCGGGCCACAGCTCGACGAGCATCTCGGCGGCGCTCGGGATGGCGGTGGCGAGGGACCTCCTCGGGAAGAAGAACCACGTCATCTCGGTGATCGGCGACGGCGCCATGACCGCCGGCCAGGCGTACGAGGCGATGAACAACTCGGGCTACCTCGACTCCAACATGATCGTGGTGCTCAACGACAACAAGCAGGTGTCCCTCCCGACGGCGACGCTCGACGGCCCCGCCACGCCCGTCGGCGCGCTGAGCAAGGCGCTGACGAAGCTCCAGTCGAGCACCAAGCTTCGCCGCCTCCGCGAGGCGGCGAAGACGGTGACGAAGCAGATCGGCGGGCAGGCGCACGAGGTGGCGGCGAAGGTGGACGAGTACGCGCGCGGCATGGTGAGCGCGTCGGGCTCGACGCTGTTCGAGGAGCTCGGGCTCTACTACATCGGCCCCGTCGACGGCCACAGCGTCGACGACCTCGTCGCCATCTTCAACAAGGTGAAGTCGATGCCGGCGCCGGGGCCGGTGCTCGTCCACATCGTGACGGAGAAGGGGAAGGGCTACCCGCCGGCGGAGGCCGCCGCCGACCGGATGCACGGCGTGGTCAAGTTCGACCCGACGACGGGGAGGCAGTTCAAGTCCAAGTGTTCGACGTTGTCCTACACCCAGTACTTTGCCGAGGCGCTGATCCGGGAGGCCGAGGCCGACGACAAGGTGGTCGGCATCCACGCCGCCATGGGCGGCGGCACGGGGCTCAACTACTTCCACAAGAGGTTCCCGGAGCGGTGCTTCGACGTGGGGATCGCGGAGCAGCACGCCGTGACGTTCGCCGCGGGGCTCGCCGCCGAGGGGCTCAAGCCGTTCTGCGCCATCTACTCGTCGTTCCTGCAGCGAGGGTACGACCAGGTGGTGCACGACGTCGACCTGCAGCGGCTGCCGGTGAGGTTCGCCATGGACAGGGCGGGGCTCGTCGGCGCCGACGGGCCCACGCACTGCGGCGCGTTCGACGTCGCCTACATGGCGTGCCTGCCGAACATGGTCGTCATGGCGCCCGCCGACGAGGCCGAGCTCATGCACATGGTCGCCACCGCCGCAGCCATCGACGACCGCCCTAGCTGCTTCCGCTTCCCCCGCGGCAATGGCATTGGCGCCGTCCTCCCTCCCAACCACAAGGGCACACCTCTCGAGGTCGGGAAGGGGAGGGTGCTCGTAGGAGGGAACAGGGTGGCGCTGCTAGGGTACGGCACGATGGTGCAGGCGTGCATGAAGGCGGCAGAGGCGCTGAAGGAGCACGGCATCTACGTCACCGTCGCCGACGCGCGTTTCTGCAAGCCGCTCGACACAGGGCTTATCCGGGAGCTCGCTGCCGAGCACGAGGTCCTCGTCACTGTGGAGGAGGGCTCCATCGGAGGGTTCGGTTCCCACGTCGCCCACTACCTCAGCCTCAGCGGCCTCCTCGATGGCCCCCTCAAGTTGAGGTCCATGTTCTTGCCAGACAGGTACATAGACCATGGTGCACCAGTAGACCAGCTTGAGGAGGCAGGATTGACACCAAGGCACATTGCTGCCACTGTGCTGTCCTTGCTTGGGAGGCCAATGGAGGCACTTCAGCTCAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MALQASSSPSMFRAIPTNTNASCRRKLQVRASAAAAAANGGGDGKVMMRKEAASGAWKIDYSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSSSLGVVELAVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFGAGHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQAHEVAAKVDEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKGKGYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGIHAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKGRVLVGGNRVALLGYGTMVQACMKAAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAHYLSLSGLLDGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRHIAATVLSLLGRPMEALQLS</aaseq>

Gene Sequence

<dnaseqindica>1..78#181..1812#1922..2206#2568..2714#ATGGCGCTCCAGGCATCGTCGTCGCCGTCCATGTTCCGCGCGATCCCGACGAACACCAACGCTTCTTGCCGGCGAAAGGTACGCCGTACAGCTCGCCGGAGCGGCGGCCGCGCGGCGGATGGTCTGTTTCTTCTTTCTTGGGTCGGAGAATTGATTGGTGTTTGTGTGTGTTGGTTTCAGTTGCAGGTCAGGGCGAGCGCAGCGGCGGCGGCGGCGAACGGCGGCGGGGATGGGAAGGTGATGATGAGGAAGGAGGCGGCGTCGGGCGCGTGGAAGATCGACTACTCCGGCGAGAAGCCGGCGACGCCTCTGCTTGACACGGTGAACTACCCGGTCCACATGAAGAACCTCTCGACGCCGGAGCTGGAGCAGCTGGCGGCGGAGCTCCGGGCGGAGATCGTGCACACGGTGTCCAAGACCGGGGGCCACCTGAGCTCCAGCCTGGGCGTCGTCGAGCTCGCCGTGGCGCTGCACCACGTGTTCGACACGCCGGAGGACAAGATCATCTGGGACGTCGGGCACCAGGCGTACCCGCACAAGATCCTGACGGGGCGGCGTTCGCGGATGCACACCATCCGGCAGACCTCCGGGCTCGCCGGGTTCCCGAAGCGCGACGAGAGCGCGCACGACGCGTTCGGCGCGGGCCACAGCTCGACGAGCATCTCGGCGGCGCTCGGGATGGCGGTGGCGAGGGACCTCCTCGGGAAGAAGAACCACGTCATCTCGGTGATCGGCGACGGCGCCATGACCGCCGGCCAGGCGTACGAGGCGATGAACAACTCGGGCTACCTCGACTCCAACATGATCGTGGTGCTCAACGACAACAAGCAGGTGTCCCTCCCGACGGCGACGCTCGACGGCCCCGCCACGCCCGTCGGCGCGCTGAGCAAGGCGCTGACGAAGCTCCAGTCGAGCACCAAGCTTCGCCGCCTCCGCGAGGCGGCGAAGACGGTGACGAAGCAGATCGGCGGGCAGGCGCACGAGGTGGCGGCGAAGGTGGACGAGTACGCGCGCGGCATGGTGAGCGCGTCGGGCTCGACGCTGTTCGAGGAGCTCGGGCTCTACTACATCGGCCCCGTCGACGGCCACAGCGTCGACGACCTCGTCGCCATCTTCAACAAGGTGAAGTCGATGCCGGCGCCGGGGCCGGTGCTCGTCCACATCGTGACGGAGAAGGGGAAGGGCTACCCGCCGGCGGAGGCCGCCGCCGACCGGATGCACGGCGTGGTCAAGTTCGACCCGACGACGGGGAGGCAGTTCAAGTCCAAGTGTTCGACGTTGTCCTACACCCAGTACTTTGCCGAGGCGCTGATCCGGGAGGCCGAGGCCGACGACAAGGTGGTCGGCATCCACGCCGCCATGGGCGGCGGCACGGGGCTCAACTACTTCCACAAGAGGTTCCCGGAGCGGTGCTTCGACGTGGGGATCGCGGAGCAGCACGCCGTGACGTTCGCCGCGGGGCTCGCCGCCGAGGGGCTCAAGCCGTTCTGCGCCATCTACTCGTCGTTCCTGCAGCGAGGGTACGACCAGGTGGTGCACGACGTCGACCTGCAGCGGCTGCCGGTGAGGTTCGCCATGGACAGGGCGGGGCTCGTCGGCGCCGACGGGCCCACGCACTGCGGCGCGTTCGACGTCGCCTACATGGCGTGCCTGCCGAACATGGTCGTCATGGCGCCCGCCGACGAGGCCGAGCTCATGCACATGGTCGCCACCGCCGCAGCCATCGACGACCGCCCTAGCTGCTTCCGCTTCCCCCGCGGCAATGGCATTGGCGCCGTCCTCCCTCCCAACCACAAGGGCACACCTCTCGAGGTACAACACTCCTCCTACTACTATTCCCACCTCGTTCTTAAAATATAGTAATCTAGTACTGGATGAGACGTATTCTCAAGATCTCTAATGGCGGCGATGGTCGGTGCAGGTCGGGAAGGGGAGGGTGCTCGTAGGAGGGAACAGGGTGGCGCTGCTAGGGTACGGCACGATGGTGCAGGCGTGCATGAAGGCGGCAGAGGCGCTGAAGGAGCACGGCATCTACGTCACCGTCGCCGACGCGCGTTTCTGCAAGCCGCTCGACACAGGGCTTATCCGGGAGCTCGCTGCCGAGCACGAGGTCCTCGTCACTGTGGAGGAGGGCTCCATCGGAGGGTTCGGTTCCCACGTCGCCCACTACCTCAGCCTCAGCGGCCTCCTCGATGGCCCCCTCAAGGTAATAATAACCCTGCTAATTAAAAAATAAGTAATTTTGTGGGCTATAAGAAAGTATCTCGAGGTACGTGAGTTTTACATTAAAATTGTGTACATCACGGTACCTAAGTTTTTTATTAAAAAAATGTGGTATGTCCCAATACATTTTGAAGGATGGTAAAATCACCCTAAAAAATACCACCTACCATATCGTGCAATTCCACGAGGTAGCACACTTTCTAGTATTATTTTTTTATGGTACAAGAAAGTGTACTAAAGATGGTATAGAAAAGTCAAAAACTTAATGGGTCGTACAATTAATTATTGGAAAGTTACTGTTAATGTAATTAACCATGTGTTTTATATGTTTTTTTCATATGCAGTTGAGGTCCATGTTCTTGCCAGACAGGTACATAGACCATGGTGCACCAGTAGACCAGCTTGAGGAGGCAGGATTGACACCAAGGCACATTGCTGCCACTGTGCTGTCCTTGCTTGGGAGGCCAATGGAGGCACTTCAGCTCAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025304