BGIOSGA025317

From RiceWiki
Revision as of 06:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025317| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025317, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025317

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025317, complete gene.

LocusTag

OSJNBB0003E08.39

Ensembl Transcript ID

BGIOSGA025317-TA

Ensembl Protein ID

BGIOSGA025317-PA

Length

6783

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4947494..4954276

Sequence Coding Region

4947494..4949080,4952155..4953051,4953164..4953452,4954254..4954276

Genome Context

<gbrowseImage1> name=IndicaChromosome07:4947494..4954276 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:4947494..4954276 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCTCGCTCGCCGCCTCCTCCCTCCCCTCCACGCGGACCCACCGCCCGGACGCCGCCTCGCACTCCTCCTCCTCCTCCGTCCGCCTCCTCCGCTCGCTCGCACGGTCCCGCCGCGCGGACCTCGCGCACCGGGCGCTCCTGCTCTTCCGCTCGCTCCAGTCCACCCCGTCCCCGCCGCCGCCGCACGTCTCGCTGCCGGCCGTGCTCTCCGCGGCGGCCTTCCTCTCGGCGCTCCCCGAGGGACGCCAGCTGCACGCGCTCGCCGCCAAGCTCGGACTCGCCCCGTCCCACACCGTCGTCGCCAACTCGCTCCTCCACCTCTACTCCTCCTGCGGCCTCCCGGGCGCCGCGCTCGACCTCTTCCGCCGCATCCCCGACAGGTCGCTCGTGTCGTGGAACACCGCCGTCGACGCCCTCGTCGGGAACGGCGACCACCTCGCCGCGCTCGACCTCTTCCGGGAGATGCAGCGGGACACGGAGCTCGCGCCCGACGCGTACACCGTGCAGAGCGTCCTCGGCGCGTGCGCCGGCGCCGGCGCGCTCTCGCTCGGCGTCTACGCGCACGCGTTGCTGCTCAGGGAGCTCGGGGGTGACGGCGACGGCGAGGCGGTGTCCCGCGACATGCTGATCAACAACTCGCTGGTGGATCTGTACGGGAAGTGCGGGGCGCTGGAGCTCGCGCAGCAGGTGTTCGACAGAATGCCCGCGCGGGACCTCGCGTCTTGGAACGTGATGATCCTCACGCTGGCCAACCACGGTCGTGTCTGTGAGTCGGTGGAGCTGTTCGATCGGATGACTCAGGTGGAGAAGATGGCTCCGAATGCCATCACGTTCGTCGCGGTGCTCAGCGCGTGCAACCATGGTGGGCTAGTGGAGGAGGGCAGGAGATATTTTGCAATGATGGTTGATCAGTACAGAATCAAGCCTAGGATCGAACACTATGGGTGCATGGTCGATCTCTTGGCACGAGCAGGGTTCATCGAGGAAGCTCTCGATATCGTGGCTGGAATGAACTGTCGGCCCGACGCCATCATCTGGAGAAGCCTACTTGATGCATGCTGCAAGAAGAATGCCGGATTGGAGCTTACTGAGGCCATGGCCAAGCTAGCACTGGAGGTTCCTGATGATGCTGTGAGCGGTGTGTATGTATTGCTTTCGAGGGTTTATGCATCCGCGCAGCGGTGGAACGATGTGGGCATGGTGCGGCGGTTGATGGTGGAAGAGGGCGTCAAGAAGGAGCCAGGGTTCAGTTCCATTGAAATGGATGGCTTGGTTCATCAGTTCGTCGCGGGCGATACTTCGCATCCACAATCTGAGGCGATATATGAAAAACTGGATGAAATTCAGCTGAAGCTCACATCTGCTGGATACAAGCCAGATTTATCAGAGGCTCCTTTGGTTGCTAGTATTGACAATGCCAAGGGCGCCGCCCTCCGGTTGCACAGCGAGCGTCTGGCCATATCGTTTGGTCTGCTCAACGCGACGCCTGGGGCACCTATCCGGATTCTGAAGAACCTGAGAGTTTGCAAGGACTGTCACACAATCAGCAAGCTCATATCGAAGCTCTATGGCGTGGAGATCATCCCACAGCCACCCCGCGCGCAACGCCGCAACGCCCGCCCGTCGCGCGCACCAGCGCCGTCGCGCGCGGCGCGCCACCCCAGCCCCCAACACACAAAAGCAACGCCAAGCCTCGCACGCGCGCGAGGCCGACGCAAGGAGGAGAGGCTGCCCCGGGGGGAGAGAGAGATCACCCGCCTCGCCGCCCGCCCGCGCCGCGGCGGATCGAGGGAGCTGTTCGAGCGCGCGAGGACGGTGCGGCTGCGCGGCCACCATGACAAGTACCTGTACGCGGAGGAGGACGAGTCGCGCGTCTCCCAGGACCGGAGCGCCTCGTCCCCGAACGCGCGGTGGTCCGTCGAGCCGGTCCCCCACGCCCCCGGCGTCCTCCGCCTCCGCAGCCACTACGGCCGCTACCTCTCCGCCTCCAACGAGCCCTTCCTCCTCGGCGTCACCGGCCGCAAGGTCCTCCAGGCCCTCCCCCACCGCCTCGACTCCTCCGTCGAGTGGGTCCCCGTCCGCGACGGCGCCCACGCCCGCCTCCGCACCCGCTACGGCAACTACCTCCGCGCCAACGGCGGCCTCCCGCCGTGGCGCAACTCCGTCACCCACGACGTCCCCCACCGCCACGCCGGGTGGATCCTCTGGACCGTCGAGGTCGTCGAGGTCCTCCCGGAATCCCTCGTCCCCGCCCCCATCGCCTCCGACGACGACCCCGCCGCGCCGCATTACAAGACACCTTCTCGCGGGCCCTCTCCCGTGCCGACGCCGGCGCTGGCGCCTGCTTCGCCGCCGCGGCACCGTCCGGCGAGCCCACCTTCGTACTTAGCGCGGCCACCGCCGCCGCCACCGGGCTACATCGAGCCACCACAGGGATACATCGAGCCACCTCCACCGGAGCCCACCCTGGCGAGAATTGAGTCCACAGAATCCTTCTCGCTGCCGCTGCACAAGGTGGATGGGCGGGCGATCCACTACCACATTGGGGATGACAACGGCGACATCGGCGATGATCAGGAAGGACACTCATTCACGTTCAACGGGACTAGCCTGGAGGAGCTTTTGGAGAGGTTGCAGGAGGAGACGGGGCTCAACGACGTGATTATCTGCTCTCGTAGCCCGATCAATGGGAAGCTCATGCCCCTCCGCTTGCAGCTGCCGCCCAACAACGCCGCCATGCATATCGTGCTCGTGCGTGAGTCATCAAAAGGTAGAGTGATCTCTGGTAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MLSLAASSLPSTRTHRPDAASHSSSSSVRLLRSLARSRRADLAHRALLLFRSLQSTPSPPPPHVSLPAVLSAAAFLSALPEGRQLHALAAKLGLAPSHTVVANSLLHLYSSCGLPGAALDLFRRIPDRSLVSWNTAVDALVGNGDHLAALDLFREMQRDTELAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGDGEAVSRDMLINNSLVDLYGKCGALELAQQVFDRMPARDLASWNVMILTLANHGRVCESVELFDRMTQVEKMAPNAITFVAVLSACNHGGLVEEGRRYFAMMVDQYRIKPRIEHYGCMVDLLARAGFIEEALDIVAGMNCRPDAIIWRSLLDACCKKNAGLELTEAMAKLALEVPDDAVSGVYVLLSRVYASAQRWNDVGMVRRLMVEEGVKKEPGFSSIEMDGLVHQFVAGDTSHPQSEAIYEKLDEIQLKLTSAGYKPDLSEAPLVASIDNAKGAALRLHSERLAISFGLLNATPGAPIRILKNLRVCKDCHTISKLISKLYGVEIIPQPPRAQRRNARPSRAPAPSRAARHPSPQHTKATPSLARARGRRKEERLPRGEREITRLAARPRRGGSRELFERARTVRLRGHHDKYLYAEEDESRVSQDRSASSPNARWSVEPVPHAPGVLRLRSHYGRYLSASNEPFLLGVTGRKVLQALPHRLDSSVEWVPVRDGAHARLRTRYGNYLRANGGLPPWRNSVTHDVPHRHAGWILWTVEVVEVLPESLVPAPIASDDDPAAPHYKTPSRGPSPVPTPALAPASPPRHRPASPPSYLARPPPPPPGYIEPPQGYIEPPPPEPTLARIESTESFSLPLHKVDGRAIHYHIGDDNGDIGDDQEGHSFTFNGTSLEELLERLQEETGLNDVIICSRSPINGKLMPLRLQLPPNNAAMHIVLVRESSKGRVISGS</aaseq>

Gene Sequence

<dnaseqindica>1..1587#4662..5558#5671..5959#6761..6783#ATGCTCTCGCTCGCCGCCTCCTCCCTCCCCTCCACGCGGACCCACCGCCCGGACGCCGCCTCGCACTCCTCCTCCTCCTCCGTCCGCCTCCTCCGCTCGCTCGCACGGTCCCGCCGCGCGGACCTCGCGCACCGGGCGCTCCTGCTCTTCCGCTCGCTCCAGTCCACCCCGTCCCCGCCGCCGCCGCACGTCTCGCTGCCGGCCGTGCTCTCCGCGGCGGCCTTCCTCTCGGCGCTCCCCGAGGGACGCCAGCTGCACGCGCTCGCCGCCAAGCTCGGACTCGCCCCGTCCCACACCGTCGTCGCCAACTCGCTCCTCCACCTCTACTCCTCCTGCGGCCTCCCGGGCGCCGCGCTCGACCTCTTCCGCCGCATCCCCGACAGGTCGCTCGTGTCGTGGAACACCGCCGTCGACGCCCTCGTCGGGAACGGCGACCACCTCGCCGCGCTCGACCTCTTCCGGGAGATGCAGCGGGACACGGAGCTCGCGCCCGACGCGTACACCGTGCAGAGCGTCCTCGGCGCGTGCGCCGGCGCCGGCGCGCTCTCGCTCGGCGTCTACGCGCACGCGTTGCTGCTCAGGGAGCTCGGGGGTGACGGCGACGGCGAGGCGGTGTCCCGCGACATGCTGATCAACAACTCGCTGGTGGATCTGTACGGGAAGTGCGGGGCGCTGGAGCTCGCGCAGCAGGTGTTCGACAGAATGCCCGCGCGGGACCTCGCGTCTTGGAACGTGATGATCCTCACGCTGGCCAACCACGGTCGTGTCTGTGAGTCGGTGGAGCTGTTCGATCGGATGACTCAGGTGGAGAAGATGGCTCCGAATGCCATCACGTTCGTCGCGGTGCTCAGCGCGTGCAACCATGGTGGGCTAGTGGAGGAGGGCAGGAGATATTTTGCAATGATGGTTGATCAGTACAGAATCAAGCCTAGGATCGAACACTATGGGTGCATGGTCGATCTCTTGGCACGAGCAGGGTTCATCGAGGAAGCTCTCGATATCGTGGCTGGAATGAACTGTCGGCCCGACGCCATCATCTGGAGAAGCCTACTTGATGCATGCTGCAAGAAGAATGCCGGATTGGAGCTTACTGAGGCCATGGCCAAGCTAGCACTGGAGGTTCCTGATGATGCTGTGAGCGGTGTGTATGTATTGCTTTCGAGGGTTTATGCATCCGCGCAGCGGTGGAACGATGTGGGCATGGTGCGGCGGTTGATGGTGGAAGAGGGCGTCAAGAAGGAGCCAGGGTTCAGTTCCATTGAAATGGATGGCTTGGTTCATCAGTTCGTCGCGGGCGATACTTCGCATCCACAATCTGAGGCGATATATGAAAAACTGGATGAAATTCAGCTGAAGCTCACATCTGCTGGATACAAGCCAGATTTATCAGAGGCTCCTTTGGTTGCTAGTATTGACAATGCCAAGGGCGCCGCCCTCCGGTTGCACAGCGAGCGTCTGGCCATATCGTTTGGTCTGCTCAACGCGACGCCTGGGGCACCTATCCGGATTCTGAAGAACCTGAGAGTTTGCAAGGACTGTCACACAATCAGCAAGCTCATATCGAAGCTCTATGGCGTGGAGATCATCGTGAGGGATCGAATTCGATTCCATCATTTCAAGGATGGGTCATGTTCTTGCAAAGATTACTGGTGATCACATCATGAGCCATAACGTCTGATGCTACCAGTAGAGATCCCTTTGGTGTGTTAGAAGCGCCTCTTGCCTCCAAGCCAAGGTGAAATGGGATGTTCAATGCTGACTACAGCCTTTCATATTTTTTTTCTAGGACAGATGAACATTAGCAGATTGATTAGAGAAACAGGACATTGTATAATATATTCAATCTCATTTTCTTCTTGAGCCATCAAGGTAAATATTCTAATTACTCTGAATCACGACTGTGTCTATATGAACAACTATGTCTATATGAACAACTATGTTCACTTCATCTTGCAGAAAAATCTGAGATAAATGACAATTCTTCTGTGTTCAGGGTAACTTCTTGTGCTCGTCATGATCTAACCAAACAGAAAATTACATGCAACCAAAGCTATGCACAACTAATAAGTAAGAACCATTTGATTGTTTCTTTTGTGGAATTTTCGAGTTTTGCAGTATGATCTGATCTACTCCCTCCGTTCCAAAATAATTCAACTTCTAGAGTTTGAATTTTGTCCCACAAAAAATCAACTTCTATCATCCTACCTACCCTCGGCACTTAAAACGAGAAGTTTTATCCCTTCAAAACCCTTTGCTTACTTATCACTCTTACTACTTTTCCCTCGGCACTTAAAACGAGAAGTTTTATCCCTTCAAAACCCTTTACCTACCTATCACTCTTACTACTTTTTTCAATGATTATGGGCATTTTTGTCATTCTCCATCTCCACCCATTCCACCTTGGGATGCTAGGAATGGATTTTTTTTGGGACGGACGGAGTATATCCTTGCACTGCAAGGTTTTTGTTTAACTTTGGCAACAACTGATAAGATGATATCAAAACATGAGAACCCAAGCACATTCTAGTTCTTCTTACAATATGGAAGTATGGAATTGCAACAACTCATATCATTGAGAAAAGAAATAATTAACTAGCAGCTAAGATTCTAGTTAGTCTTTATTTTATTTATTGTTTTTACACTCTCATGCCTGTAATTTTTATTTACTCTGGATGAAGAGACTAGATTGATTTCCACTCAAACAGTAAATAAAAAGGTAAAGATAAATATTGCATGAACTTTGAGCTAATCCGGCTATCCAAGAGGACCGGTAATTTCACAATTTTGTTACAAATCAGTCGGCATGTGTCGGTGATATGAACCCGGGGGTATCAAGACCATAGGGAGGAGACTGCTCCCGGTGGCCACGTGGCCCTCCCCCCGAGGGGGGTTAGGCCTGAGGCAAGGCGGCGCCGCCCCCTACATGCCCGCCCGACCTCCTCCGCGCGGTGCCGCATGTGCTGCGTTAGGTGGGCGCCCCCCAGCGCCCACCTAACCGCATTTAAGGCGGCTTGAGCGGGCACGCCACGCTGCATTAAATGCGGCGCGTGGTGCGCCTGACCGGTCTGTGACTGATCTGCAACCGGTCGAATGACCAGTGTGACCGAGGTAGTGTGCTTGCACACTGGTTGCTTGTCAGGCGGCGTGCACCCCCTGTCACATCGTGATGATGAGAGGCTGCTCAACCCCTCATCACAGCCGGAGACGGTTTGCCTAACCTGGTCAGGGTAGGGTTTCCATTTCCCAGCGCAAGAGAAGACCCAAAGGTCTTCTCCCATTAAATGTCAAATGACGTGTGTGTCCCCCCGTGTCAGTCGGATGGATTTGACAGGCCCCACACCACAACAAGGAGTGCCAGAGACTTCCAGGACAAGCAACAAGACATGCATTTAATGTGATTATCCTCCCTGAATAGGCTCAGTGGGCCCATGTGGTAACCCCTTGAGGTATAAAAGGAGTTCCATGCCTACTTAGGGGAAGATGAGCCCTTTTTTACTAGACGAATTTGGTGCCCCTCATCATCAACATCTTCTACTCCAACAAGGAGATCTTGTAATTTCTCACCCGATTAGCATAGCACAGGAGTAGGGTATTACGCTTCTCAGCGGCCTGAACCTGTATAATCCCTTTTATCTCATCGTTCTCGAGAGGCCCGACCCTCTCTACTTCGTTTTTTTTCGCTAAGTTCTCGAATCTCACTCGCTGCCCCCCGGCCAAACCAATGAGAGGGGCCTCACTGTCCCCCGCTTGAGGAGTTCACCCTCCGACAGCGTGGCCACTCAACAAAATCTTAAGTCAAAACTTAGCTGACACATTAAAAATAAAAAAGACAAATCCAATGCCTAAACAATATTGTTACTATTCACACTGAATTTATCTTTTTTTTCTCAATATGCAGATCGAATTTGAGCTTGATTTGGTGGAGTGATAGATGCCATTGCACTCTACATTGTCATTTTTTTTACAATTATTTACATTGAATTTGAGAGGGAAAAAACTACGAGGGGAGTGATTAGAATCCATTTCTGCTTTCAATTCAAATATAGAGTGAAACACACAACGATCTCTAAACTTGTAGGTGTGTCACCTAGATTCATGAACTCTCAAAATGCATTTTAGATCTTTGAACTTATTCCGGATGTCATATAGGTTCAAATGGGCCTCAGCTGATTTCGTACATTAATATGGTATTCCACGGTGGTACCTACATGTTAGTGGGACCCACATGCCAGTCATATAGAAAAAAAAAGAGAGATGAGAAAAAAGAAATAATTTTAAAAAAACAAAATGAAAAAGAGAGGAGACAGAGGATAAAAAGATGTTTTAAATTCTTTCTATATGGGTCTCACTTACTCATGGGTGTCACCAATCACCATGGCATGCCACATCAGTTGAGCTGAAACCCGTTTGTTCCATATGACACTAATGACAATTTCGGTAATCCGACAATAAATGTTAAAGATAGCCTATAGCACACTCGTACAATTTTAGAGACCGTTCATGTACTACACTCTTCGAATATATCACCAACAAAATATCATAGCACATCACTCTTTGTTAAAAGGAAATAATTTCATATTACTGACACTTCTAAAACCCCAACCACCAAGGCACCAACAACGCAAAACTCTCCCCGCGCGCCACGGCGCGTCCGAGAATAGCCACAGCCACCCCGCGCGCAACGCCGCAACGCCCGCCCGTCGCGCGCACCAGCGCCGTCGCGCGCGGCGCGCCACCCCAGCCCCCAACACACAAAAGCAACGCCAAGCCTCGCACGCGCGCGAGGCCGACGCAAGGAGGAGAGGCTGCCCCGGGGGGAGAGAGAGATCACCCGCCTCGCCGCCCGCCCGCGCCGCGGCGGATCGAGGGAGCTGTTCGAGCGCGCGAGGACGGTGCGGCTGCGCGGCCACCATGACAAGTACCTGTACGCGGAGGAGGACGAGTCGCGCGTCTCCCAGGACCGGAGCGCCTCGTCCCCGAACGCGCGGTGGTCCGTCGAGCCGGTCCCCCACGCCCCCGGCGTCCTCCGCCTCCGCAGCCACTACGGCCGCTACCTCTCCGCCTCCAACGAGCCCTTCCTCCTCGGCGTCACCGGCCGCAAGGTCCTCCAGGCCCTCCCCCACCGCCTCGACTCCTCCGTCGAGTGGGTCCCCGTCCGCGACGGCGCCCACGCCCGCCTCCGCACCCGCTACGGCAACTACCTCCGCGCCAACGGCGGCCTCCCGCCGTGGCGCAACTCCGTCACCCACGACGTCCCCCACCGCCACGCCGGGTGGATCCTCTGGACCGTCGAGGTCGTCGAGGTCCTCCCGGAATCCCTCGTCCCCGCCCCCATCGCCTCCGACGACGACCCCGCCGCGCCGCATTACAAGACACCTTCTCGCGGGCCCTCTCCCGTGCCGACGCCGGCGCTGGCGCCTGCTTCGCCGCCGCGGCACCGTCCGGCGAGCCCACCTTCGTACTTAGCGCGGCCACCGCCGCCGCCACCGGGCTACATCGAGCCACCACAGGGATACATCGAGCCACCTCCACCGGAGCCCACCCTGGCGAGAATTGAGGTCCGTACTTTCCACGCCCGCCATCTGCTCGACGAATTGTACAGCCCAACAGGGATGTTAGATGAAAATGCCAAGTGCTTATTGTTGTTGCGGACGCATTTTGCCATTTTAGTCCACAGAATCCTTCTCGCTGCCGCTGCACAAGGTGGATGGGCGGGCGATCCACTACCACATTGGGGATGACAACGGCGACATCGGCGATGATCAGGAAGGACACTCATTCACGTTCAACGGGACTAGCCTGGAGGAGCTTTTGGAGAGGTTGCAGGAGGAGACGGGGCTCAACGACGTGATTATCTGCTCTCGTAGCCCGATCAATGGGAAGCTCATGCCCCTCCGCTTGCAGCTGCCGCCCAACAACGCCGCCATGCATATCGTGCTCGTGCGTGAGTCATCAAAAGGTGGGCTTTTCTTTTCATCAGTTATTGCTCATACCATTAGATTCACATTTCACACCGGTGGAACATGATATGTTGAATCATGGAATTTAACGATACCTACTAAATTTCTATATACCATTAGATTGATACTTGATAGGCCTCCTATAAGCACAATATACCATCCTTTCTTCAGTGTTAGCTGAAGTGCTCAACTGTGTATAAAATGGTGAACTTCAAACATAAAAATAGGTTAATTCAGAATGCTAACATTTTAAGTTGAGTTTTTGGTTATGCAGATATTTGTCGTTATTTAGTCAATGCACACTGAGCCAACATCCCCTAAACATTTGCTAAATCCTGTATAGTAGATGCTAGTTTAAATTCCTTTATTGAAATAGCTGCAACACAATAATATTGTGGCATGCCATGACCTTATCATATTTACTGACCATCAAATATACTTGGCGGAAAATGGAAGCTAAAATGCATATTGATAAGATATCGATTTTGTGTAAAGTTAAAATTTTCAAGTTAGGACGTTTTAGTGACTAACACTACGATTTTGTTCTTATTTCTTACTCTGATAGAAATGTTTTATCTTTCAGTGGCAAAATCATTTCCATGACCATGTGGTAAAATTTGAAGAGGGTGGTGTCAGCGACTCAAATCAAGCAAGAACTGTGCATCTGTTGTATATATTGTAATCCCTGTTTATTATCAGTTCCACTGGCTACCATAATCAAGTATTATTCTTCCATCTTCAGGAGATCTCATTCTTGTAAGTATTTGCTTCTGTCAACTTTTTTATCATTTATTCAACAGGTAGAGTGATCTCTGGTAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025317