BGIOSGA025342

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Revision as of 06:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025342| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025342, complete gene.| tag = P0519E0...")
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Gene Name

BGIOSGA025342

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025342, complete gene.

LocusTag

P0519E02.21

Ensembl Transcript ID

BGIOSGA025342-TA

Ensembl Protein ID

BGIOSGA025342-PA

Length

4271

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5437161..5441431

Sequence Coding Region

5437161..5437309,5437390..5437743,5438088..5438231,5438304..5438387,5438537..5438574
,5438682..5438726,5439059..5439121,5439654..5439743,5439846..5439935
,5440591..5440745,5441372..5441431

Genome Context

<gbrowseImage1> name=IndicaChromosome07:5437161..5441431 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:5437161..5441431 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCCAACATCGTCCCCGCCTACGGCTGCTCCGGTAACCTCGCCGCCGCCGCCGCCCCGCCGGAGTACCGCTGCGTCACGCGCCTCCGCCACCGCCGCCTCCTCACCTTCCTCTGGCTCCACGGCTTCCGATCCACCTTCGAAGCGATGGCGGAGGAGACGAAGGTGCTAGTGTCGTTGCCGCGCCTGGAGCGCCTCATCACCAGCAACATGTGGGACGACGCCATCGGCTACATCTGCCGCTTCCTGCCGCCGTCCTCCGGCTCCACCGGCCAGCGCCGCCGCCGCGGGTCGCATCTCAGCGAGGAGGCCCAGACCCTCCTCCTCTTCCTCCACATGCACAAGTCCTTCGCCGACGTCGTCGCCGGCAACAAGGCCGGCGCTGCCTGGTCCGACAAGCACCGCCGCCTCTATGCCCAATCTAGCGGCCTCTCCCCCTACAGCCACGCCGCCAGAATCCGCCGCTCCATCCTCTCCTTCGTCTTGTCGGACCGTACCAGGGAGTCCTTGGACTGGGGGCGCGTTAGAGAGCAAGTAGCGCAGATCGTCCGAAGCTTGCTTCATAGTACTCCAGAGCTCGTCGGATTTGTGGACTTGCCGGGAGGCATGGTGAAGCCGCATAACGTGCTTCCCATTGGCTTCGGTTTCCGATCCAAGCGTCACGTGAGACAGCAAAGCCACCCCCAAGCATCAACTATTGCCAAGCTCTATCTTGAGATGAAGAGATGTCTGCCTTCTTCAGGCCAGCCTCAGGGGTTAAGTCTGGAAGGACTGTCAAATAAGGCGAGGAGCTGGATGGCGGATATCCTTGATTTAAGCTTACGTGCTGGCTGCAAGCGTTCAGAACACCATGAAGGGTATCCACTCCAATCAAGTTCTCTCGTTGCTGCAATCACACAGACTATGTTTAGCACCATAACAACTGATACTGAAAATTCTGGAATGGCTTCAGCGACAAAAACTGGTGTTCCTGCCAGTACAGTCTTGCAAACTTTGATTGGCACCATGATAAGTCCTGGAAAAAAATCTGGGATCTCATCAGTGACAAATGCAGGCACTGATATGCATTCAAGTCAAGAAGATTGCCATACTGAGAATTATTGCCAGGGTTTCACTCCAAGAAAACATCCAAGGGAAGAAGTGGAACCTGAGGAAGATATTAGCCCTAAAAGGCAACAAACAACTGTGAAGTTTGGTGAAGCAAGTGTGTCATTGATTGGTGTTGCTGAAGCTGAGGGTAAAGCTCGCTTAGTGGAACTCTCCATGTGA</cdnaseq>

Protein Sequence

<aaseq>MEPNIVPAYGCSGNLAAAAAPPEYRCVTRLRHRRLLTFLWLHGFRSTFEAMAEETKVLVSLPRLERLITSNMWDDAIGYICRFLPPSSGSTGQRRRRGSHLSEEAQTLLLFLHMHKSFADVVAGNKAGAAWSDKHRRLYAQSSGLSPYSHAARIRRSILSFVLSDRTRESLDWGRVREQVAQIVRSLLHSTPELVGFVDLPGGMVKPHNVLPIGFGFRSKRHVRQQSHPQASTIAKLYLEMKRCLPSSGQPQGLSLEGLSNKARSWMADILDLSLRAGCKRSEHHEGYPLQSSSLVAAITQTMFSTITTDTENSGMASATKTGVPASTVLQTLIGTMISPGKKSGISSVTNAGTDMHSSQEDCHTENYCQGFTPRKHPREEVEPEEDISPKRQQTTVKFGEASVSLIGVAEAEGKARLVELSM</aaseq>

Gene Sequence

<dnaseqindica>1..149#230..583#928..1071#1144..1227#1377..1414#1522..1566#1899..1961#2494..2583#2686..2775#3431..3585#4212..4271#ATGGAGCCCAACATCGTCCCCGCCTACGGCTGCTCCGGTAACCTCGCCGCCGCCGCCGCCCCGCCGGAGTACCGCTGCGTCACGCGCCTCCGCCACCGCCGCCTCCTCACCTTCCTCTGGCTCCACGGCTTCCGATCCACCTTCGAAGCGTACGTATAGAGGCATCGTCTTCTTTTTCCCGATCGATAGATTGTTCACGAACCGTGGCGTGGCGTGGCTGCATTTGCAGGATGGCGGAGGAGACGAAGGTGCTAGTGTCGTTGCCGCGCCTGGAGCGCCTCATCACCAGCAACATGTGGGACGACGCCATCGGCTACATCTGCCGCTTCCTGCCGCCGTCCTCCGGCTCCACCGGCCAGCGCCGCCGCCGCGGGTCGCATCTCAGCGAGGAGGCCCAGACCCTCCTCCTCTTCCTCCACATGCACAAGTCCTTCGCCGACGTCGTCGCCGGCAACAAGGCCGGCGCTGCCTGGTCCGACAAGCACCGCCGCCTCTATGCCCAATCTAGCGGCCTCTCCCCCTACAGCCACGCCGCCAGAATCCGCCGCTCCATCCTCTCCTTCGTCTTGTCGGACCGTACCAGGTACTAGCTACGTCTCCTCTCCTCTTCTCATTTGAGATCATCAATCAGCATACACACACTGGACGGTGATTAGCTTTAATTACTCTCTCCGTTTCTAAATATTTTACATCGTTAACTTTTTAGCACATGTTTGACCGTTCGTCTTATTGAATAACTTTTGTGAGATATGTAAAACTATATGTATACATATAAATATATTTAACAATGAATCAAATGATAGGAAAGTAATTAATAATTACTTAAATTTTTTGAATAAGACGAACGGTCAAACATATTTTAAAAAAGTCAACGGCGTCAAATATTTAAAAACGGAGGGAGTAATTAATTTGTTCCGCATATGTCAGGGAGTCCTTGGACTGGGGGCGCGTTAGAGAGCAAGTAGCGCAGATCGTCCGAAGCTTGCTTCATAGTACTCCAGAGCTCGTCGGATTTGTGGACTTGCCGGGAGGCATGGTGAAGCCGCATAACGTGCTTCCCATTGGCTTCGGGTATGTACTACTGATTACTCCACTCACCAAAATTAATTATTCACTTCTGACTGATTTTAATTCCTTTTTTAGTTTCCGATCCAAGCGTCACGTGAGACAGCAAAGCCACCCCCAAGCATCAACTATTGCCAAGCTCTATCTTGAGATGAAGAGATGGTACAGTACAATTATGCTACTATCTTGAGAGTAATCTTGCTTTTGAAGAAAAAAAAAATCAAATCTTAGTGATGCTCCATTGTTCTGCCTTTGCTTTTCTTTACCCTCTCGTGACATTCACAAACACTTGCATATGTTGCTTTTTGCAGTCTGCCTTCTTCAGGCCAGCCTCAGGGGTTAAGTCTGGGTGGGTATAATTTCCAACTGTTATTGTAAAACAATGCACCTCTTTTATTAGTTTCACTGTTAATTCTGCACCTGTGACAACCGGTAACCACACATATTTCTACACAGAAGGACTGTCAAATAAGGCGAGGAGCTGGATGGCGGATATCCTTGGTAAAATTAAATAGCGTTCGCTCTATATATGCCATCTCTTTGGTTAATTTCCACTTTAGGCCTTATTCGGTTAATCCTCATGAGGAAGGGGTTAGAGGGGATTGGATCCACTCCAATTCCCCTTCAATCCACTTAGGAAGAGCTTAACCGAACAAGGCCTTATAGGGTTTGATCACCTATTCACACATTTTATGTTATGATGCCATTTGATTTCTATGAACTGTCATAATTAGAATGTACACGATCTGGTCATACTACAGTGTTTGACTTTGAGAAACCACATGTATACAGTATTCATATTCATGTCAACTGTCAAATTGTGTGATCATCAGATTTAAGCTTACGTGCTGGCTGCAAGCGTTCAGAACACCATGAAGGGTATCCACTCCAATCAAGTGAGAAGAAAGGCAAGTTAACAATCGCTTTGTCTACCTAGACACTAATATACTAACACGTCGTTTTCTCTCCACTTACTCTATATATCTACTGGCTGTGTGATTTATCGAGTCCTTTTGGTCACATCTAATACTTGCTTGATCCACGTGGGCTCTATATTTTCAACTTTTATCCTCTATTTATACATTGGATTTGTGGAGATGGCAACCGATTGGTTAATTCTTTGCAGAATTAATTAGAATGAATTAATACTTTGCTAAGTTTATGCTTAGGTTACTCCTGCGCTGAGCTATGCTCCCATAATACCTTGTTGATCGTGCTACATCTTCTGTACCCTTTGTCTGTTTTGATTAAAATGCTATGGGACAAACAGCTTTTCATTAAGTTTACTATGCTACTATTCAAGTATTCATATCATACTATACTCCTGTGCAGGAGCCAGCAGCATTTTCAGGATTGATGTTTTCTTTGCATTTTATCAGCATATGGCTTCCCGCTGCCATCTGTAATAATTTCTGAACTCATTTGCAGGTTCTCTCGTTGCTGCAATCACACAGACTATGTTTAGCACCATAACAACTGATACTGAAAATTCTGGAATGGCTTCAGCGACAAAAACTGGTAACCTTCAACTTCAATTGTGACAAACCTCTATATGCACAATTATTCCCTTGAACTGTTGCACCTGCTGCATGCCATTTCTAACTTCTGAGCTCACTGCAGGTGTTCCTGCCAGTACAGTCTTGCAAACTTTGATTGGCACCATGATAAGTCCTGGAAAAAAATCTGGGATCTCATCAGTGACAAATGCAGGTAAACTAGTTGAACATACTTATTTGTTTTCAAACAAGGGCAATCCTCTATGTTCACAATAAATCCCTAGAAAATGTTGTTAAATGACACAAAATTTTATTAATATGGGCCTATATGCATCAGTGATGCATATTATCTAAAGAATATGCATCAGCGATGATGATATATCTGATCCATGATGGCATTTCATGCCAATCAATGCTTTTGATGTCTCAAGCGGTTGTTGCAAAATTCTGTATTTGTATGCTTTCTTCCAGAAAATTATTAAGTGTCTTGGCATGGTAGTTTCGGATTATGTTTGCACACCATTGCATATTCATGGTCACCTGCACTTGCTCATTTTTTTCTCTATAGGTCCTTCTGAAATTTGTTTTGCGTCTTTTATGTACACGGTAGTTTTAGCATTACATTGCATATGAGATTTTCTAAGATTGTGTGCTACAACTAAGTGATGCACTTTCTTGGTCATCTGCTCATATTTTAACTGTGTCCTGCTAAAAGCTATTGGATATCATGAAAAAGTAATGAAAAGCTTATTCACCTATTTGGATGCATTCCCTGTTTAAGAGAACTGAGAACGTTATGCGTAAAATTTCAGACTAGGTAATGCTATTACTTAATCCAGTGATCCTTGTGAGTGTTAATTCTTGGGCAGGCACTGATATGCATTCAAGTCAAGAAGATTGCCATACTGAGAATTATTGCCAGGGTTTCACTCCAAGAAAACATCCAAGGGAAGAAGTGGAACCTGAGGAAGATATTAGCCCTAAAAGGCAACAAACAACTGTGAAGTTTGGTGAAGCAAGTGTGGTAAGATACTAGATTTTTATTTCTTTTCTTTACTATGGTGGGATAAACGAATTAATTTAGGATGTTAACAGTAAAAGACACAAATTTATTAAGGTGCTAGAATAAATTTAGTATCAAATGCATAATTGACTCTCTATAGATCTTTAGATGAAGCATGGTTGTTCTAAGGCAAGTCAACATCCAACAACCGCACAACTGTGGCCTCATAAGTTTATAAGATAGTACTTGAAATTGTATCAATTTCAATATAATAATTTTGTATTAATGCATGTTAGAAATGGTCACTTTGGACTATGCTATGGCATGCGGTCATACCGGTGTCCTTGATTTGTGACAGGACTGTTCTTATGCCATGAATACCAGAGTAATTAAGTTACATTATCACCTTTTATTTTGCTGACCATCATACTGGTGTTCTTGATCTGTTATTACGTTGTAGAGTAGCACAACCTACTCTGTCGACTAGTTTCAATTATCAAATGGAGTTTAAAGAACATGATTTCTGTTGGCTAAATTAATATGCATTTTACAAAACGTGAGGAGTGTACAGGAGAGAATTAACATGGGCTATTTTTTATCCTGTATTATGTGACTAATTGAGGTGTGGAATACTTGTTGGAGTGCAGTCATTGATTGGTGTTGCTGAAGCTGAGGGTAAAGCTCGCTTAGTGGAACTCTCCATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025342

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025342&oldid=50936"