BGIOSGA025344

From RiceWiki
Revision as of 06:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025344| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025344, complete gene.| tag = OsI_252...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025344

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025344, complete gene.

LocusTag

OsI_25282

Ensembl Transcript ID

BGIOSGA025344-TA

Ensembl Protein ID

BGIOSGA025344-PA

Length

4929

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5446276..5451204

Sequence Coding Region

5446276..5446447,5448767..5448864,5449007..5449111,5449336..5449482,5450342..5450449
,5450852..5450943,5451018..5451057,5451145..5451204

Genome Context

<gbrowseImage1> name=IndicaChromosome07:5446276..5451204 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:5446276..5451204 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTGCGTCCCCTCCCTCTCCCTCTCCTCGTCCGCGACCCTCTCGATTGATCCAGTACCTGATTTCTCACCACCATCCCCTTCAATTTGGGGGGATTTCTTCGTTTTTCGCGTGGCGTGCGTGCAGGTGTGCGTCTTCTACCTCGTGCTTCGGGCGCTCGACACCGTCGGGCTAGTCGGCATTGGACTTTCAAGGCTCTTTCATGCTGCTGGGTTAGAAGATCTTGCTCCCGAATCGCTTTCTAATTCAATGGGTTTATTTTTGCAGAAAGTCAATATTACTCGGGATTACCTGGAGGACATAAATGAGATACCAAAATCACGCATGTTCTGGCCACGAGAAATATGGAGTAAATATGTTGACAAACTTGAGGATCTCAAATACGAAAATAATTCAGTGAAGGCAGTAAAATGCTTGAATGAGATGGTGACTAATGGTTTAATACATACTGAAGATTGCCTTCGGTATATGTCTGCTCTAAAGGATATTACTATTCTCCGTTTTTGTGCAATACCCCAGCATTCTTGCACTCTCATAGGGCTGACTGCACGAATAATCAATGAAACAAATTCTATGGCTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAGATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCAATAAAGGAGACCTGCAAATCATCCGGTTTGCTGAAGATAAGGGGATATGACTTGGATAGGCCAAAAAGGAACCCTGCTATGATCATGATGCTACTGCTGCTCTTGGTAGCTATTTTCTTGGGAGCTCTGTATAGGAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MPCVPSLSLSSSATLSIDPVPDFSPPSPSIWGDFFVFRVACVQVCVFYLVLRALDTVGLVGIGLSRLFHAAGLEDLAPESLSNSMGLFLQKVNITRDYLEDINEIPKSRMFWPREIWSKYVDKLEDLKYENNSVKAVKCLNEMVTNGLIHTEDCLRYMSALKDITILRFCAIPQHSCTLIGLTARIINETNSMADVYTAFYEFSSLLAEKIDDNDPNASLTRKRVNAIKETCKSSGLLKIRGYDLDRPKRNPAMIMMLLLLLVAIFLGALYRR</aaseq>

Gene Sequence

<dnaseqindica>1..172#2492..2589#2732..2836#3061..3207#4067..4174#4577..4668#4743..4782#4870..4929#ATGCCGTGCGTCCCCTCCCTCTCCCTCTCCTCGTCCGCGACCCTCTCGATTGATCCAGTACCTGATTTCTCACCACCATCCCCTTCAATTTGGGGGGATTTCTTCGTTTTTCGCGTGGCGTGCGTGCAGGTGTGCGTCTTCTACCTCGTGCTTCGGGCGCTCGACACCGTCGGTGAGTAGCTCCCACGTTGTGTTTTTTTTCCCGAGATTTCTGCACTTTGCGGTCGTAGCATATGTACGGTATTGCAAGCAACATGAACAGTTTATGAACTGCAAACAAATAAATACATTTTCCCTTTTTTTTTCTTATTCTGATTTGAGCGAGCGAAGTGAGTATGTACAAGCTCAACATCTATAATTGGCTATACTTGGTAAGCATTTATTAAAAAAAATACGTATAGACTTTTCCTTTATGTAACTCGTTTTCGTATTGTAGCTGTTTTTTCTTTTATGGTTTGAGGGCAACTGCAAAGTCTGTGCACAAACCACCTCGTTTTCATATGGGTACTGACGTTGAGATGCTTTTATGGTTACTTTTCCAAAGAAAAGCAGTGGTGCATAATGCTTAGTACTTTTTTTTCCATTTTTGTCCTCTCTACCTTTTTAAATTTTCAAATTTGAGGGGAAAAAAGAATGGAAATGCCACTCACCAATGTTTACATTTTTTGTCACAAATTTGTTGGGAATTGTCAGTAGTAAACTGCACTGACCAATTAGCAGTGCAAGAGAGAATTGATAGACTTTCAAACAAGAGGTGATAGGGCATGGGGGTACAATGCATTTCTTTTTTTGGTTTAATCCTTCTCTTGAAAGAATTTTCTTCTTAAATTTATAGTTCTGTTCTGATTGGAGTGCAGAAGATGATACTAGCATCCCTACTGAGATTAAGGTGCCCATTCTTCAGCCATTCCACCGTCATATCTATAACCGGGATTGGCATTTCTCATGTAAGGCAAAAAATTTCGTGTCCATGTGAATTTACTATACATGTGTTTCATAAGTTGTAACTATCTTAGTCCTTCGCTTGTTGGCATCACGTTGGTTCCAGGTCGACCAAAGGACTGCAAGATTCTGATGGATAAATTCCACTATGTTTGACAGCTTTCTTGGAGCTTGGTTCAGGGTAAATTCCAAGTAGTTTTAATCTCTTTGTATGATCAATATTTTCTTGTTAACTTCTTTGGACATTGTAAAATTTTAGTTACTTTGGCAGTTTGGCCTGATGACAGTCACTTGACATCATTGATATTACATATCCAGTCAGTTAGATGTCCTCATATGAAATCAAACACTTATTTCCAATTAAGCTATATCTAGATGATGTTAGATATGTATAATCATTTACACATCAGGAAGGAATGGTAATTAATTTCTTACTCTCAAACTATAAGGTCACATGTTAATTATGTTATATGCTTAGATCATTGTTTGTTTTGGCTTGTTCCACAATGCTTCCAAATTAGTAAATGAAGGACAATCAAATGGGTCAAACCAAAAAAATGGAGTTATCAAGTATCAACCCTATGACATTGATTAGTATTTTAATTCAGAATTATCTAGTCTATGTAAGTGGTCCCATTCAAGTAGAAGAAGCAATACATGTTTACTCTGTTATCCAGATACCAAGAGGCAATTGAAGAAATTACCAGGAGAATGGGTGCAGGAATGGCAAAGTTTATATGCAAGGAGGTATATTGTTCCTTACAGAATAATATGTTCCATATTGTCAGAAGCAATAATATCATAATGAAGAAAAGTTTGCTCTGCTTGTAAATGTTATCTGTATAGAAGCCCTTCTGTCTGACTGTAGAATAGCAGAATATAGCTTTTGTATTCTAGATCTATTAGAATTGATGACACAACAGTTGATCTTGTTGTACAGCATACATAGAGGATGATATCATTTGTCGTTAAGCTGCTCAGTATGTCATTATAGATCTCAACATTAATAGCTATGGGATGCTCCCTATAGAAGGTTTTTCATGTGTTGAAAAACTGTGCAGATATGCTTATCATGTAATCAGGGTCCATTTGATGAATGATAACCATAAGCTAATGCAAAGATGTGGTCATAGCATTCTTGCTGCCGTTCCAGTTGTTATCTGTTATTTTGGCTTGTGCTCCTGGCCATTTACATATGAATACCAGTTTGCTGGCAAAAGCATGGCTTCAGCCTAATCACCTAGTATGCAGTATTCCTAAGCCTACAGCCATGCAAATAGCATTTGTGTCTTATTGTATTTACGTCGGCCTCTGTGTGGTAAAGCTAACTGTCTCACTGCACTCAAAAGTAGTCTATGTATGTTTTACCTGAATCCTATAATATACCATCAGTTATTTCCACAATCCTATGACGATTTTTTATCTGCATCATTTACATAAAGTCATTTGAATGTAGATGATGATCATATCTTGCCGTGGACTAATATGAAGAGACCTTTTTAGGTTGAAACTGTTGATGATTATGATGAGTACTGTCACTATGTGGCAGGGCTAGTCGGCATTGGACTTTCAAGGCTCTTTCATGCTGCTGGGTTAGAAGATCTTGCTCCCGAATCGCTTTCTAATTCAATGGGTTTATTTTTGCAGGTATATTGATAATTATTCTAGTCTGGTGTTTGGCTTTTGACTTGCTGAATACAATCAGAGCATCCTCACCTTGTCTGGAAACTCACCTTGTTGGCAACTCACCTTGTCTGGAAACATTTTTTACAGTTTAAATCTATTGCAGAAAGTCAATATTACTCGGGATTACCTGGAGGACATAAATGAGATACCAAAATCACGCATGTTCTGGCCACGAGAAATATGGAGTAAATATGTTGACAAACTTGAGGTATACGGGTGCATCTATTTTGTGTAAGGATTGTCATACCTTCGTCTGTTTTCAGACCTGATATATATTGTTTTGATTACTTTTTTGACACTGATTTTTATTAAATATGGGTCACCCAACTTGTACTTTTGTAGTATGCTGAATTTTAGATAGAGTAGTTATGCGGAATGTAGAATTATCTTCTCTGTTTATTCTGAAGAACTTTTCCTTTTGTATCAATGCAGGATCTCAAATACGAAAATAATTCAGTGAAGGCAGTAAAATGCTTGAATGAGATGGTGACTAATGGTTTAATACATACTGAAGATTGCCTTCGGTATATGTCTGCTCTAAAGGATATTACTATTCTCCGTTTTTGTGCAATACCCCAGGTATATTATGTATTCACACCTCAATCCATTACAAATTTGGGATGGCCTTCTAAAATTTCATACGCTCGCCAAACTAGGGTTTATGGTCTGTGGTTGGTCATATTCAATACCATTTGATGCTGTATAAGGTTTAACTAGTGACAATTGTTTTATCACTTTTGGAGTTATTTGAGAAATAACATGAATATCATCACCACTTGATAGGTGATGGGACAATGATTACCACTGACCAATCAGATTGTCTGTATTTTTTTCTATAGAAAATCATCTTCAAGACCTCTGTACCCCGTTTATGACCTTGTTGCTCATTTGGTTGAAGTTGGATTACCATCTTAATTTCACACACATGGAGGCTGCTGGTCAGCTTCCTTGGTTCTGAAATGTTTGGCAAGCCTATATTTTCTCTTTGCTCTGTGTTCTTGTCTCTGTTCTTTTGCTAGTCTAGTCTGCTTTCTTCTACTGAAACGGCAACTTATTTTATATGTAAGCAAAGAGAGTTTATTTTTCAGGTAATGGCACTTGCAACCTATGCTCTGTGCTATAACAATGTGAATGTATTTCGAGGAGTTGTGAAGTTGAGGCGTGGTGAGTATTTTGTGATTGGCATATTTAGAAGACACAAATTAGTAATAGCTTTATATAACCCGCACAGTTTTTTTTTTTTGCATATTTCTTGTTCATAAACACCTTTGTGCTATTATCGAATTGGTTATTGGTTCAAACAATAGCTTCATATATAAAGGGCATGCATGCTTTAAAAAATTCATATTTTGTGATTAATGTATGAGTTATTCTTGTATCTCCACTCTCTATTTGCTCTTGTCTGTTATTTTGTCTGCGTTGGTTTTTGTTCTAACAGCATTCTTGCACTCTCATAGGGCTGACTGCACGAATAATCAATGAAACAAATTCTATGGCTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAGGTAGATCTGGAGTATTATCTTCTTTAGCATTCACTATGTTGGGTAAAATAAGATAAAATATGTTAATTTTTAACAGCTCATCTCTACACTAGTATGTAGTTTTTCTAAGACTATCTAAAATATTCAATTATGTCCTAGCTGTTTTAACATAGCATATAAATCGGTAATATTGCTTTGTTGCGTTTGAGAAACTAACATGAATTGGTATGCTTGTCATTTAATTGTGTTTTGTCATTTTTTTTTATATGTGACATAAGTCAATTTCCTCAAATTTAATTGTGTTTTGCCATTTTATATGTGGCATCAGATTATGGTTTCAATAATCTTTCTGTTTATTTTGTACCTTCAATACTTAAAAAGATTGTGTTTTCTTAGACACCACCATCATAACCACTGTTTCAGATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCAATAAAGGAGACCTGCAAATCATCCGGTTTGCTGAAGATAAGGTTTGTCCAGTGATCTAAAACCATTTCTGCAGCTGGTCTCAACTCGACTTATCATTCACATTGTGATTCTACAGGGGATATGACTTGGATAGGCCAAAAAGGAACCCTGCTATGGTAAATAATGCATCAACTTAAAAAAAAATCTGATAATTCTAGTTATGGTCTACTACCATTTATAATTTTCCTGTTTGACTTTCACAGATCATGATGCTACTGCTGCTCTTGGTAGCTATTTTCTTGGGAGCTCTGTATAGGAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025344