BGIOSGA025345

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Revision as of 06:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025345| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025345, complete gene.| tag = OsI_252...")
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Gene Name

BGIOSGA025345

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025345, complete gene.

LocusTag

OsI_25286

Ensembl Transcript ID

BGIOSGA025345-TA

Ensembl Protein ID

BGIOSGA025345-PA

Length

6830

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5459145..5465974

Sequence Coding Region

5459145..5459193,5459423..5459520,5459615..5459665,5460332..5460445,5460526..5460726
,5460828..5460929,5461467..5461574,5461641..5461874,5462819..5463069
,5463161..5463332,5463734..5463889,5463974..5464024,5464161..5464301
,5464383..5464583,5464674..5464805,5464877..5465050,5465324..5465563
,5465780..5465974

Genome Context

<gbrowseImage1> name=IndicaChromosome07:5459145..5465974 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:5459145..5465974 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAGCCGCTCGTCGTGAAGAAGGACGACGATCTCGACGAGGAAGAGTACTACTCGCCGTTCCTCGGGATCGAGAAGGGCGCCGTCCTGCAGGAGGCCCGCGTCTTCCACGACCCGCAGCTCGACGCACGCCGTTGCTGCCAGGTCATCACCAAGCTCCTATACCTGCTCAACCAGGGTGACACCTTCACCAAGGTGGAGGCCACAGAGGTCTTTTTTGCGACGACCAAGTTGTTTCAATCCAAGGATGCAGGCCTTAGGAGAATGGTGTACCTCATGATCAAGGAACTCTCCCCATCAGCAGATGAGGTTATCATCGTGACCAGCTCGTTGATGAAGGACATGAATAGCAAGACTGATATGTATCGAGCTAATGCAATAAGAGTTCTTTGCCGCATCATTGACTCAACACTTCTAACCCAAATTGAAAGATATTTGAAGCAAGCCATTGTTGACAAGAACCCTGTTGTTGCAAGCGCGGCCCTTGTTAGTGGCATCTACTTGCTTCAGACAAGTCCAGAAGTTGTGAAAAGGTGGAGCAATGAAGTTCAGGAGGCTGTACAGTCGAGAGCTGCTCTTGTTCAATTTCATGCCCTTGCTCTTCTTCACCAGATTAGGCAAAATGACCGGCTGGCTGTCAGCAAGCTTGTCACTAGTCTAACTAGGGGTTCTGTTCGCTCACCTCTGGCACAGTGCCTACTTATTCGGTACACTAGCCAGGTGATTAGAGAGTCAAGCATGAATAGTCAAGGTGGAGATCGCCCTTTCTTTGATTTCCTGGAGTCATGTCTCCGGAATAAAGCAGAAATGGTCATACTTGAGGCTGCAAGAGCGATAACTGAATTAAATGGCGTCACCAGCCGGGAGCTTACACCTGCAATTACCGTGCTGCAATTGTTCTTAAGTTCATCGAAACCTGTTCTCAGATTTGCTGCTGTTCGAACACTTAATAAGGTTGCATCAACTCATCCTTTGGCTGTCACCAATTGTAACATAGATATGGAGAGTTTAATATCTGATCAGAACAGGAGCATTGCTACCCTTGCAATTACAACACTACTTAAGACAGGCAATGAATCAAGTGTTGATCGCTTAATGAAGCAGATGACCAATTTTATGTCGGACATTGCCGATGAATTCAAGATTGTTGTCGTAGAGGCCATAAGATCCTTGTGCTTGAAGTTCCCCCTAAAATATCGGTCACTGATGAACTTTTTGAGTAATATCCTACGGGAAGAGGGTGGCTTTGAGTACAAGAAGGCTATTGTTGATTCAATTATCATACTCATTAGAGATATTCCTGATGCAAAAGAAAGTGGTTTATTTCACTTGTGTGAATTCATTGAAGATTGTGAGTTCACTTATCTGTCTACTCAGATACTTCACTTTTTGGGAAATGAAGGTCCAAAGACATCAGATCCTAGTAAATACATACGTTATATATATAACAGAGTGATACTTGAAAATGCTACTGTTCGAGCTAGTGCTGTAAGTACTTTGGCAAAGTTCGGTGCATTGGTTGACTCACTCAAGCCTCGAATTTTTGTCCTTCTGAGACGCTGCCTGTTTGATGGTGATGATGAGGTGCGTGACAGGGCCACGCTTTATCTCAAATTGCTTGGCGGGGAAGCTACAGTTGGTGAAACTGAGAAGGATGTGAATGAATTTCTCTTTGGTTCATTTGATATTCCACTAGTTAACCTGGAGACTAGCCTACGAAACTATGAACCATCAGAGGCACCTTTTGATATTTCATCTGTATCTTTGGAAACTAAATCACAACCTCTTGCTGAGAAAAAGACTACGGGCAAAAAGCCAACAGGCCCAGCATCTGCTCTCAGCGGTCCAGTTCCTACTGTTGATGCCTCATATGAGAAGCTTCTTTCATCCATTCCTGAGTTTGCTGGTTTTGGAAAACTCTTTAAGTCATCAGCTCCTGTAGAATTGACCGAAGCTGAAACTGAATATTCAGTCAATGTTGTGAAGCACATTTATGACGGGCATGTTGTGCTCCAATACAATTGTACCAATACTATACCTGAACAGCTGCTTGAAGAGGTGGTGGTTTTTGTGGATGCTTCTGAGGCCGATGAATTTTCAGAAGTTGCAACGAAATCATTAAGATCCTTACCTTATGATTCACCAGGACAAACCTTTGTGGCTTTTGAAAAGCTAGAAGGTGTCCTTGCTACTGGGAAGTTCTCAAATATACTGAAATTTATTGTTAAAGAGGTTGATCCATCCACAGGTGAAGCTGATGATGATGGCGTTGAGGATGAGTACCAGCTTGAAGATCTGGAAATTACTTCTGCTGATTATATGTTGAAGGTTGGAGTTTCCAACTTCAGAAATGCTTGGGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAGTATGGGCTTGGCGCCAGGGAAAGCCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCAGCCCTGCGAGGGAACTGATGTGGTCCCAAGCAATTCGAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGGCAATGTGAAAGTTTTAGTGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATGAAGCTAGCAGTCAGATCAGATGATCCTGAGATCAGTGACAAGATCCATGAAATCGTTGCAAATGGCTAA</cdnaseq>

Protein Sequence

<aaseq>MAQPLVVKKDDDLDEEEYYSPFLGIEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEATEVFFATTKLFQSKDAGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKTDMYRANAIRVLCRIIDSTLLTQIERYLKQAIVDKNPVVASAALVSGIYLLQTSPEVVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGSVRSPLAQCLLIRYTSQVIRESSMNSQGGDRPFFDFLESCLRNKAEMVILEAARAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVASTHPLAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQMTNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIIILIRDIPDAKESGLFHLCEFIEDCEFTYLSTQILHFLGNEGPKTSDPSKYIRYIYNRVILENATVRASAVSTLAKFGALVDSLKPRIFVLLRRCLFDGDDEVRDRATLYLKLLGGEATVGETEKDVNEFLFGSFDIPLVNLETSLRNYEPSEAPFDISSVSLETKSQPLAEKKTTGKKPTGPASALSGPVPTVDASYEKLLSSIPEFAGFGKLFKSSAPVELTEAETEYSVNVVKHIYDGHVVLQYNCTNTIPEQLLEEVVVFVDASEADEFSEVATKSLRSLPYDSPGQTFVAFEKLEGVLATGKFSNILKFIVKEVDPSTGEADDDGVEDEYQLEDLEITSADYMLKVGVSNFRNAWESMDPESERVDEYGLGARESLAEAVSAVIGILGMQPCEGTDVVPSNSRSHTCLLSGVFIGNVKVLVRLSFGLSGPKEVAMKLAVRSDDPEISDKIHEIVANG</aaseq>

Gene Sequence

<dnaseqindica>1..49#279..376#471..521#1188..1301#1382..1582#1684..1785#2323..2430#2497..2730#3675..3925#4017..4188#4590..4745#4830..4880#5017..5157#5239..5439#5530..5661#5733..5906#6180..6419#6636..6830#ATGGCGCAGCCGCTCGTCGTGAAGAAGGACGACGATCTCGACGAGGAAGGTGCGTCTCTCTCTCTCTCTATGTGTGTGTGTGTGTGTTTGGTTCGGGTTTGGTGCGCGCGCGCGCGCGTGGGGTTCGGGTTTGGGGCGCGTGCGCCCCCGCCGCACCCAGATCTGCGGCCGCGGCGGGCTAGATCTGGGCGCGATCCAGATCACGGCGCAATGCGTTGGCGCGTTTGATCGGTTCGTTGATTGATCGCTCCCGTTTGCTGCTGCTGCTGCTGCTGCAGAGTACTACTCGCCGTTCCTCGGGATCGAGAAGGGCGCCGTCCTGCAGGAGGCCCGCGTCTTCCACGACCCGCAGCTCGACGCACGCCGTTGCTGCCAGGTGAACCGCGTGTTCCGTTTTTTTCTTTCCCCTTTCGCTGGATCTCGCATCATTGGAAGATTGCTGATGATTTGATTTACCTGTGTGTCTGTAGGTCATCACCAAGCTCCTATACCTGCTCAACCAGGGTGACACCTTCACCAAGGTACAATGCTGTATACCTCATCTTGCTTTGGTCACATCTTGGCTTAGCTTGCGGATTTGAATTGATAGCGTCTCCATGTTATACACATTTATGAAGACTAGCAAAATAACCGTACGTTGTTATGGAATTTAGAAAATCATGTTGGCACATTGAAAAAATAAATCTATTTTCAGTTTAGAGCTTAATTTTAGAATTAAATTAGATGTTTCTTTATCTAGCCGCAAAAAATTTTAGACGGACCGAATTGACTTATCATTACTGCATAATTCCCTCCATTAAAAAAGTTACATCATCAACGGTCCATGAATTCTACCATTGTATTTGGTTTTGAGAATGATGGGACATGTGGGTCTCACGTCATAGTTTTAGGGAGTTGGTGGTGGGTCTGAAAATCACATGTATTATTAACATGTAGACAGTGTTGAGCTACTACTTAAGAGAGAGAAAGTGAGTGAGTGAGTGGTCAGTAGTCATAGACTAAAGGCCCAACTTTTGCCTTAATGAACTGGTTACAAACATTAGTTTTAAAAGAAGAATGGGGATCGACTGGTGTGCATAAGTGCATGTTGGTATATTATTGTTTTCTCTCATAGATGTGAGTAAGTTTTGAATGTGTTGTTCGAGGCAATATGCTCGTCACATGTAAATGAGTGAGCAATTTTGTAGGTGGAGGCCACAGAGGTCTTTTTTGCGACGACCAAGTTGTTTCAATCCAAGGATGCAGGCCTTAGGAGAATGGTGTACCTCATGATCAAGGAACTCTCCCCATCAGCAGATGAGGTTGGTGAATGTTGATTGTTACTTTGCAGTTCTCTGCAGTCTATGGATCTTTGAAAGTGTCTGTGTTACATTTGTTGCAGGTTATCATCGTGACCAGCTCGTTGATGAAGGACATGAATAGCAAGACTGATATGTATCGAGCTAATGCAATAAGAGTTCTTTGCCGCATCATTGACTCAACACTTCTAACCCAAATTGAAAGATATTTGAAGCAAGCCATTGTTGACAAGAACCCTGTTGTTGCAAGCGCGGCCCTTGTTAGTGGCATCTACTTGCTTCAGGTATGTGCAAAACGTTTAGTCTTTGCCTTTATGCAATTGCATATTACAGCCAGACCCAAATCCTTACAAATGTTTTGTTTGTATGGTTTTATTCTGAGCAGACAAGTCCAGAAGTTGTGAAAAGGTGGAGCAATGAAGTTCAGGAGGCTGTACAGTCGAGAGCTGCTCTTGTTCAATTTCATGCCCTTGCTCTTCTTCACCAGGTGAGATTTATGTTTGGTTTTTACTACTCCCTCCATCCCAAAATATAAGGCATAACCACTCATAACACAAAGACCAAGAAAACATTTAACCACCTTCTTGGTTGGATCACCTTGATGCATGCAAGCAATGTGATTGGGAGGTTTGATAGTGTAAGATTTAAAACAAATCAATTTTATAGGACCAAAAGATGCTAGTTAATGTATGCATGCATGCACGCCTTATATTATGAGACATGAGAGAAAAGTGGTTGTGCCTTATATTTTGGGATGGAGGGAGTAGTAAGTAGAATGAACATTAGTATCTGAAATATCTTGGACCTAAACAAACTACATTTAGATACCTAACATTTTTAATAATATTCTATAGAAACTTTTCTGGTCATTCTCCTAGTAATGACATTTGGTCATCCTCCATGTAAATGATACTCAGCTCTTTGTTTTGTTGCCACCTGCTAGGCAATTGCAAATAATATTATGTTAAAACAAGCTTGTCAAGCTCAGGGAACTTACAGCGTTTCCATTTATTGAATTCTGCAGATTAGGCAAAATGACCGGCTGGCTGTCAGCAAGCTTGTCACTAGTCTAACTAGGGGTTCTGTTCGCTCACCTCTGGCACAGTGCCTACTTATTCGGTACACTAGCCAGGTAATGTTTTTTGATTCTGCAAAACTTTATTTGGATAGATATCTGATACATGAGTGCCATCCATAGGTGATTAGAGAGTCAAGCATGAATAGTCAAGGTGGAGATCGCCCTTTCTTTGATTTCCTGGAGTCATGTCTCCGGAATAAAGCAGAAATGGTCATACTTGAGGCTGCAAGAGCGATAACTGAATTAAATGGCGTCACCAGCCGGGAGCTTACACCTGCAATTACCGTGCTGCAATTGTTCTTAAGTTCATCGAAACCTGTTCTCAGATTTGCTGCTGTTCGAACACTTAATAAGGTTTGTTTTATCCATAAGACTACTTTTTGTACTTTCTTGTCATTGTACTTCTGTCATGTGTGTGGAGCTTTGATTCAACTGTAGTTTACAAATACAAAGTAGATGGCTTCCCACAAATAGTTTTCTTTCTACCACACCAGTGATTGGCAAGCAATATTATATCCATTTTTTACACATTGGTACTTATCTCGAATTGGCATTAAGTCTGCATATTTTCCCCTATTATACTGTCACTGTTTTTTATGAACAATGAAATAACACTGGTTAGTTTCTGACCACAACATTGCCCTTGATTGCCTAGTTTGGAGAACCAGATTCTGCTGGCTGTTGGCCAGAAATAAACTGTATTAGTGCCTTGTCCAGTCTGGTCACATGCATAGAATGTGTGCATGTAGACCGACATGAATTGGTTAATTTACACTGAACCATCATCTGGGACCGATAGGGCCAACTGCTCTTGGAAGACACGAAAAGTCGAAAACTATCTATAGTGGTGTGGGGGATTGATCTCAAGACATAGGGACAACAGCAAGAGGGAACTAACTGGAAAAAAAACAATTAGATTTAATCCTAGTTATCCTCTATATAACTTGTGAATTTTATTTTATATATTTTGATGAGCTTGTGGGTGGGTTGTGAACTGATGGTCCAACTGGTAAACCACTGATTCAAAATGTTCACTGGTTTTATCAGTAGTCCGATTTTATAACTATGCTTGGATATAATTTGAATTTGTCGAGTATAGTTTAGTTGGAAGTTGAAACTTCTGCCTCTTGCAAATTTAATCAGGAAAAATTATATTCATTACTATGTTAATTCTTTTGTTTATGTTCTTTTTTATGGAGTTCCTCTTTTGATTATATTAAACTGTATGCTTATACTATGTTTGATAGGCTTGTTGGTTCCTTCACTTGACTTGTGTTCATTTGATATTGATTGTACAGGTTGCATCAACTCATCCTTTGGCTGTCACCAATTGTAACATAGATATGGAGAGTTTAATATCTGATCAGAACAGGAGCATTGCTACCCTTGCAATTACAACACTACTTAAGACAGGCAATGAATCAAGTGTTGATCGCTTAATGAAGCAGATGACCAATTTTATGTCGGACATTGCCGATGAATTCAAGATTGTTGTCGTAGAGGCCATAAGATCCTTGTGCTTGAAGTTCCCCCTAAAATATCGGTCACTGTACGTAGAATAGCGTATATTCTTATACAGAAATTTTTAAAGATCCAGAACTAGCTTGTCATCAGAACATTGAACTTTGTTGTGTTTGCAGGATGAACTTTTTGAGTAATATCCTACGGGAAGAGGGTGGCTTTGAGTACAAGAAGGCTATTGTTGATTCAATTATCATACTCATTAGAGATATTCCTGATGCAAAAGAAAGTGGTTTATTTCACTTGTGTGAATTCATTGAAGATTGTGAGTTCACTTATCTGTCTACTCAGGTAATGGCCAATCTATCATTTTATAAATGTGTATTTTGCAAGTCACTAGTTATTTCCGAACTTAGGAGGTTGTAACTTAATTGCGACAATGTCATGCTTGCTTCTGAAGAAATTCAAGAAATATTCTATATAGCCTTGTTATGTTGAAAGTTATATATAACTGTCCGAGGATCTTTTCTCCCCTATATTACACCGAAGTGGTGATCATTATTCACCAGCAAAATATTTTGATTTAGCAAGTGCTTAGGATTAGCCTATGCAAATTTTAGTTGTTTTGTACTTGTGGAAAGTCCTCCAATCGTTTTGGGATGTAGAAACAGTTTCCCTGCCTTGCATACCCCAAAGTTACACAATGAATTATGAATTTCTAATGAATTTACTATGTTCCAATCTTGCAACAGATACTTCACTTTTTGGGAAATGAAGGTCCAAAGACATCAGATCCTAGTAAATACATACGTTATATATATAACAGAGTGATACTTGAAAATGCTACTGTTCGAGCTAGTGCTGTAAGTACTTTGGCAAAGTTCGGTGCATTGGTTGACTCACTCAAGGTAATTTGGCAGATTTATACCCGTAAACCCCTCTGTTGACTCTCTTGAGGCTTGGGTTGCACTTACCGCCTTCTTTTGTTGCAGCCTCGAATTTTTGTCCTTCTGAGACGCTGCCTGTTTGATGGTGATGATGAGGTGAGCAAAAAGATAATTATGCTCTGTTCTTCCTCATGAACAGCTTAGCATTGTCAGTTCTGTTCTTAAAAGGGCCCATCAAACTCTCCTTCCTGGCAAGAAGCCTTTCTTACATTTGCTATGCTTTTCACCTCAGGTGCGTGACAGGGCCACGCTTTATCTCAAATTGCTTGGCGGGGAAGCTACAGTTGGTGAAACTGAGAAGGATGTGAATGAATTTCTCTTTGGTTCATTTGATATTCCACTAGTTAACCTGGAGACTAGCCTACGAAACTATGTATGTCTTTCAACAACATTAATGTTCTATGATTTTTAGATTATCATGTTGGTGCCTTTACATTCTTGTCGTATGCTGCAGGAACCATCAGAGGCACCTTTTGATATTTCATCTGTATCTTTGGAAACTAAATCACAACCTCTTGCTGAGAAAAAGACTACGGGCAAAAAGCCAACAGGCCCAGCATCTGCTCTCAGCGGTCCAGTTCCTACTGTTGATGCCTCATATGAGAAGCTTCTTTCATCCATTCCTGAGTTTGCTGGTTTTGGAAAACTCTTTAAGGTTAGCTTGGTGTTCTTTTATTTTGTTCCCACTGAAAATATATCACTATGTTCTACCACTTATGTTTTGACTTTTTATCCTTTTTTTCAGTCATCAGCTCCTGTAGAATTGACCGAAGCTGAAACTGAATATTCAGTCAATGTTGTGAAGCACATTTATGACGGGCATGTTGTGCTCCAATACAATTGTACCAATACTATACCTGAACAGCTGCTTGAAGAGGTAAACGATTTTTTCCACTCAGTATTTTTATTTATGGATTAGTGCTTTTCTGAACAATGTTTTTATTTCAGGTGGTGGTTTTTGTGGATGCTTCTGAGGCCGATGAATTTTCAGAAGTTGCAACGAAATCATTAAGATCCTTACCTTATGATTCACCAGGACAAACCTTTGTGGCTTTTGAAAAGCTAGAAGGTGTCCTTGCTACTGGGAAGTTCTCAAATATACTGAAATTTATTGTTAAAGAGGTATGTGCTCCCAGTATTGTTCTTTTTCTGTTTTCACATATGGTCTGAATCAATCGATTTTCCTTCACATTTAATTCTGAGGATGTCCTGGACCTTGGTCGAATCGAAAACATTCTCCTTATTCCTTTCACATAGAGTTTGTGATTTATCCCTTGATGTTTTACTTGGGATCTTAATATTTTTTATTCCTTGAGGAGATTATTATGCATCTACATGTTCAGTTGATGCAGTAGACGGTTTGACTGGTTTTATTTAACTGGAACTGTGTTTCAGGTTGATCCATCCACAGGTGAAGCTGATGATGATGGCGTTGAGGATGAGTACCAGCTTGAAGATCTGGAAATTACTTCTGCTGATTATATGTTGAAGGTTGGAGTTTCCAACTTCAGAAATGCTTGGGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAGTATGGGCTTGGCGCCAGGGAAAGCCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCAGCCCTGCGAGGTCAGTCACTTTCTAATTTATCTATTGAATGAATACGAAGTCCTGCCAGTTTGTAACCTTTTATACCATGATAGTTTTTTTTTTCTGAAGTTAATTTTAATAATGTGACGCTAGTTCTTATCTAATCGGCAACCATATGAAATAGAGTTAGCATATTGAGCATTGCTTCATGAAACGATAATCTCACCTAACCATTTTCTCGCCTTTGGTTTTTAGGGAACTGATGTGGTCCCAAGCAATTCGAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGGCAATGTGAAAGTTTTAGTGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATGAAGCTAGCAGTCAGATCAGATGATCCTGAGATCAGTGACAAGATCCATGAAATCGTTGCAAATGGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025345