BGIOSGA025383

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Revision as of 06:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025383| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025383, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA025383

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025383, complete gene.

LocusTag

OSJNBA0008C11.22-2

Ensembl Transcript ID

BGIOSGA025383-TA

Ensembl Protein ID

BGIOSGA025383-PA

Length

4356

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:6068734..6073089

Sequence Coding Region

6068734..6069004,6069532..6069653,6069857..6069966,6070091..6070195,6071595..6073089

Genome Context

<gbrowseImage1> name=IndicaChromosome07:6068734..6073089 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:6068734..6073089 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGTGCCGCTGGTGCCAGTGCCAACGACGGCGGCCGACGACGACGCGGCGGCGGGGTCGCCGTCGCCGTCGCCGGAGATGGACTTGGAAGAAGACGGCGGCGGCGGCAAGGTGGTGTACGTGGCGGTCAGCGGCAACAGGAACAAGGCGCTGCCGACGCTGCGGTGGGCGCTGCGTCGCCACGCCCCGGCGCCGGAGGGGAGGAAGAAGACCGCGCTGCTGGTGCTCGTGTATGTGCACCGGCCAGCCACCATGATCCCAATCTTCACAGGAGCAAAGGTGCCTTCAATTGTTCTCAAGGATGAAATAGTCACTTCTTACCGGCAGCAAGAGAGGAGGATTACTGAAAAATTTCTCCAACAATACCTGGACATATGCACATCTGAAAAGGTTCAAGCTGAGGCATTCATGATTGCGAATGACAACATTGCGCATGGCCTCATAGGGGCAATTCAAGAGCATAAGATCAGCACACTCATCATGGGAGCTGGCATATATGGGAAAACAAGCACCCAAAGGACAAAGCTAGCAATCACCATGGAGAAGGAAGCTGATCCATCTTGTAAGATTTTGTTTGTCCACAAGGGAAATCTATTCTCCATCAGGCCCAGGACTACAAGCATCCCCATCTCTGTGAATAGTGATGTTCCTACTATGGCAGGTTCTCACATACCTTGGTTCAGCTTCATTCCTCCTTGGCACCATGATGACCGCAGCAGCGTCACATCTTCTTCCTTCCTCACCGACTCGCAAACCATGACCGACAATGGGCTTGATCCAGAAAATCTAGACCACCAATTCTTCGAAAATGCGATGCCCATGTTCGATTATGACAGCTTCAGCCTTATCAGACATGAATCCCTCCATGGCCTAAATGAGATAGCTAGCCAGATCATACTGTCTGGCCATTCACAGTACTTGCGCCAGTTGAATTTCGATGTAAGCTGCAATGAGGAAGTAAGAAACCGCCAGTTCATTCACGGTATCGACTCGATCCTCGGAGTCGATTCGATGAACCTTGAGGAGGTGTACTGGAAGGCCTACATGGAGGACAAGACAATCAAGTGGATTTATCTACTGGAGTACATCCATAAGATTGTATCAGTCTCACTGAAGCAAATCCAGGAGCAGCATGATGGTGCCTCTAGTGGCCTGACACTTGAAGGCCTCTCAGATGCTGCAACCAAGCCTATCAATCGATTGCTCACATTTGCGTCGACGGTCAGTAAGGTGAATGGTTCGCCGGAGAAGCTCTTCCATACGTTGCAGATGCACAAGGCATTGTCAGAAGCTTCTCCGATGATCCAACAAGCCCTCTTGGGAGAACAGAAAGAGTTCTTCGTCAGAGAGCTTCACAGAATTCTTGACACGCTGGAGGACTCTGCAAGGGAAATACTTGGTAAGCTGAAAGTCCAGATTCAATCACATGATTCACCGATCATACCAGGAGGCAGTGTACACTTGGTTACAACATACCTCATGAGATATATCACATTGTTGGCACATAACACCAGCTCACTGAACACCATTCTAGGTCATGATCATAGTGACCATCTGTTGGCAGCTGACGGAATCAACTTGCTGTTGCCGAGCCACCTAATTTCTGGCTTGATATTCGATCTTGGCTCGATGCTTCAGAAGCAGTCTAAGCTGTACAAACCTGAAGGATTGCAGTACCTGTTCCTTATGAACAATGAGCATTTTATTCTTCAGCAATTTGAGCGGGAAGACATAAAACTTATGATAGGAACTGAGTGGATTCAAAAGTACTGTCATAACATCAACCGATACAAAGTGAAATATATAGAAGCAACATGGGCTACTGTGGTATCTTGTTTGGACAAGAAGATCAGCATTTCACTAAATTTTCTGCAACCTTCACCCTTGAAAGAATTTATTTCCTCTTTCGAAACAGAGTATAGACTCCAGATGCACTGGAAGGTCCCTGATCCAAAGCTCCGTATTGAGCTGAGACAAACTGTCTGTGACTATGTTCTGCCAGCCTATTGTGAATTCATGGAGAAGCATCCAAATTTAGAGAAATCAGGGGACAATCTTGAAGATATCAGGAACAAATTAAATGAACTGTTTGAAGGATGA</cdnaseq>

Protein Sequence

<aaseq>MDVPLVPVPTTAADDDAAAGSPSPSPEMDLEEDGGGGKVVYVAVSGNRNKALPTLRWALRRHAPAPEGRKKTALLVLVYVHRPATMIPIFTGAKVPSIVLKDEIVTSYRQQERRITEKFLQQYLDICTSEKVQAEAFMIANDNIAHGLIGAIQEHKISTLIMGAGIYGKTSTQRTKLAITMEKEADPSCKILFVHKGNLFSIRPRTTSIPISVNSDVPTMAGSHIPWFSFIPPWHHDDRSSVTSSSFLTDSQTMTDNGLDPENLDHQFFENAMPMFDYDSFSLIRHESLHGLNEIASQIILSGHSQYLRQLNFDVSCNEEVRNRQFIHGIDSILGVDSMNLEEVYWKAYMEDKTIKWIYLLEYIHKIVSVSLKQIQEQHDGASSGLTLEGLSDAATKPINRLLTFASTVSKVNGSPEKLFHTLQMHKALSEASPMIQQALLGEQKEFFVRELHRILDTLEDSAREILGKLKVQIQSHDSPIIPGGSVHLVTTYLMRYITLLAHNTSSLNTILGHDHSDHLLAADGINLLLPSHLISGLIFDLGSMLQKQSKLYKPEGLQYLFLMNNEHFILQQFEREDIKLMIGTEWIQKYCHNINRYKVKYIEATWATVVSCLDKKISISLNFLQPSPLKEFISSFETEYRLQMHWKVPDPKLRIELRQTVCDYVLPAYCEFMEKHPNLEKSGDNLEDIRNKLNELFEG</aaseq>

Gene Sequence

<dnaseqindica>1..271#799..920#1124..1233#1358..1462#2862..4356#ATGGACGTGCCGCTGGTGCCAGTGCCAACGACGGCGGCCGACGACGACGCGGCGGCGGGGTCGCCGTCGCCGTCGCCGGAGATGGACTTGGAAGAAGACGGCGGCGGCGGCAAGGTGGTGTACGTGGCGGTCAGCGGCAACAGGAACAAGGCGCTGCCGACGCTGCGGTGGGCGCTGCGTCGCCACGCCCCGGCGCCGGAGGGGAGGAAGAAGACCGCGCTGCTGGTGCTCGTGTATGTGCACCGGCCAGCCACCATGATCCCAATCTTCAGTGAGGCTTCCCATTGTTTAATTTCTCTTGTTTTTTTTTCTTTCAAGGAAATGGTGATGATTCAGTGCATATAAGTTTCCTGTGTCGTAATGAGGGTTTTGAATTTTGAAACATGGGTTTTTGCCGGTGGGGACTGAAAGAACCGAAATTTTGTTTTTTTAAAAAGAATTTTAACATATTTTAACTGAATTTAAATAAATTTTAATCAAATTTACAAATATTTGATAAAAACAGGTAATTTTGGGGAGATTTTTGCTTGCCAGTGGGGGCCGAAATTACCAAAATTTTCGAACCAAAATTTCAACCCATGGTCGTAAAACACCTTGTAGAAAAGAAAAAAAAACCTTTCGTAAATAGCGTACCATGAACTCAGGACTTTAGGGTGCTAGTCAGGTCACTTAAACCACTAGCCTATATAGCTTTTCGCAAGGCGTCTTTGTTGTGATGTTGGTGGGTGGTGGCCGAATTTGTGGGGAGAAAAAAAAAGAGATACTTGAGATTAAGATCCTCCCAATTTTGTATTCCAGCAGGAGCAAAGGTGCCTTCAATTGTTCTCAAGGATGAAATAGTCACTTCTTACCGGCAGCAAGAGAGGAGGATTACTGAAAAATTTCTCCAACAATACCTGGACATATGCACATCTGAAAAGGTGGAAAATCAAGCTCATTATACATATCACTGAATAAAATTCCTTCTTCTGTTGGTTGTTGGTGTCTCTGCAATCTGCATTTCCCTCTAGCTTTTGTGTACAGAATGTCTCTAGAGAACCACCTCACCACCTCATTTTGTCGATATTTCGCTACAGAGAATGTCTCTAGCAAACCACCTCATTTTGCCGATATTTCATTACAGGTTCAAGCTGAGGCATTCATGATTGCGAATGACAACATTGCGCATGGCCTCATAGGGGCAATTCAAGAGCATAAGATCAGCACACTCATCATGGGAGCTGGCATATATGGGTATCCAGCCCTCCCAAAGTTATTTATTTTTATCACTTCAATTTCCATTTCTAACAAAATTCTCCGAACTGATCGGTGCTCTTGTAACAATGTGATGCATTATTGCACCTTTTCTTCTTGGCAGGAAAACAAGCACCCAAAGGACAAAGCTAGCAATCACCATGGAGAAGGAAGCTGATCCATCTTGTAAGATTTTGTTTGTCCACAAGGGAAATCTATTCTCCATCAGGTAGTTGTTCTTTGAGGAGCACTCAGTATTCATGGCTTCTTTTCTTTCTAAGACAATACAAGAAAAATTCTGGCATCTACACCTGTAGATAGACATAACAGTTACATTACATAAATGCGTCAATCTGCCAAATCTTTATCTATTATATACTATAAAAGTCCATTAAACATCCTACAAACGCTCTTAAGCCGCCACGTGGTACTCCTACGAATACTCCTATAACGCCTCGTGGCACTCTAATGTATTAAAGAAATTGCTATAAATTGTAAGAATAAAGTAAAACATCTAGCCTTCAGTTTTCATTTAATTCGGCGGGCCTGTTATTTTGATCCATCAGATCAAATCACATGCTAATCTCCATGGCCCCACCCCTAGCCTGTATGTAATCCAGTTTGTGCTTCCGCATCACGTACGCATACTCCCGTCCGCTCCTTCACGCCCTCCAATTTCCTTTCAATTCCCAATTTATGTTAGTTAGAAAACATAATTTATAATAAAAATTAAAAACATCTAAATCATAGAGATAATTTTTCATCTGCTTATGTATCACTAATTTACATGGTAAAAACTCATATTTAATTATATTTTAACTTGCAAAAAAGAAATTTGTTAGCGTTGGGTTGTAACAATTATAAGAAAATATGAAAATAATAATTGTATAGTAGTAGATTTTACCATCGTACATCACCTCATAATAATTAAATTAGATCTATAATTGTAAAAATAAAAATGAACCTAGTTATGAGTGATATTCTAAAAAACTATTCCCTCCATTATGAAATTATTACAAGTCAAAATAACATTATTGTATTTATCATGAAAACTACTTTCATATGGATGCATACTTTTCATATTTACATTAATACATTTTTAATATGTTTCCTACTCTCTCCATCCCAAAATATAAGAGATTTTGGATGGATGTGACACATCCTAGTACTATGAATCTGAACATGATATGTCACATCCACCTAAAATACCTTATAGTTTGGGATGGAGGGAGTAGGAAAAATACCTTACTTTTAATTTACGCTTAATTTTTTTAGTCATTGTTTTAAATAAATAATTTCCGATAGGGATGAATTAAATATTTTATAATATAAAGGTAACAAATAGCTTAGAAAAATTATCTAAGCAATTCTAGTAAATAAAATTTATGGAGAAATAGTATACTTTTAAAGCGTGGTAGATATCCTCCGGTTGATGGTCCACATTTATAAGTTCTTTAAACATAGCCTACGACCCTATGCTCGCGTATTTGGGCGGGCTACCTTGTTGATAAAATGAATGTATAACTAGCTACAGCAACTCAATAATTCCAACCATGTTCATGGTTTTTTGCCTTGTACTTTTTAAAATGGAAAATGCTGTCAACAACCAGAGATGCAATGTTTTGCAGGCCCAGGACTACAAGCATCCCCATCTCTGTGAATAGTGATGTTCCTACTATGGCAGGTTCTCACATACCTTGGTTCAGCTTCATTCCTCCTTGGCACCATGATGACCGCAGCAGCGTCACATCTTCTTCCTTCCTCACCGACTCGCAAACCATGACCGACAATGGGCTTGATCCAGAAAATCTAGACCACCAATTCTTCGAAAATGCGATGCCCATGTTCGATTATGACAGCTTCAGCCTTATCAGACATGAATCCCTCCATGGCCTAAATGAGATAGCTAGCCAGATCATACTGTCTGGCCATTCACAGTACTTGCGCCAGTTGAATTTCGATGTAAGCTGCAATGAGGAAGTAAGAAACCGCCAGTTCATTCACGGTATCGACTCGATCCTCGGAGTCGATTCGATGAACCTTGAGGAGGTGTACTGGAAGGCCTACATGGAGGACAAGACAATCAAGTGGATTTATCTACTGGAGTACATCCATAAGATTGTATCAGTCTCACTGAAGCAAATCCAGGAGCAGCATGATGGTGCCTCTAGTGGCCTGACACTTGAAGGCCTCTCAGATGCTGCAACCAAGCCTATCAATCGATTGCTCACATTTGCGTCGACGGTCAGTAAGGTGAATGGTTCGCCGGAGAAGCTCTTCCATACGTTGCAGATGCACAAGGCATTGTCAGAAGCTTCTCCGATGATCCAACAAGCCCTCTTGGGAGAACAGAAAGAGTTCTTCGTCAGAGAGCTTCACAGAATTCTTGACACGCTGGAGGACTCTGCAAGGGAAATACTTGGTAAGCTGAAAGTCCAGATTCAATCACATGATTCACCGATCATACCAGGAGGCAGTGTACACTTGGTTACAACATACCTCATGAGATATATCACATTGTTGGCACATAACACCAGCTCACTGAACACCATTCTAGGTCATGATCATAGTGACCATCTGTTGGCAGCTGACGGAATCAACTTGCTGTTGCCGAGCCACCTAATTTCTGGCTTGATATTCGATCTTGGCTCGATGCTTCAGAAGCAGTCTAAGCTGTACAAACCTGAAGGATTGCAGTACCTGTTCCTTATGAACAATGAGCATTTTATTCTTCAGCAATTTGAGCGGGAAGACATAAAACTTATGATAGGAACTGAGTGGATTCAAAAGTACTGTCATAACATCAACCGATACAAAGTGAAATATATAGAAGCAACATGGGCTACTGTGGTATCTTGTTTGGACAAGAAGATCAGCATTTCACTAAATTTTCTGCAACCTTCACCCTTGAAAGAATTTATTTCCTCTTTCGAAACAGAGTATAGACTCCAGATGCACTGGAAGGTCCCTGATCCAAAGCTCCGTATTGAGCTGAGACAAACTGTCTGTGACTATGTTCTGCCAGCCTATTGTGAATTCATGGAGAAGCATCCAAATTTAGAGAAATCAGGGGACAATCTTGAAGATATCAGGAACAAATTAAATGAACTGTTTGAAGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025383