BGIOSGA025390

From RiceWiki
Revision as of 06:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025390| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025390, complete gene.| tag = OJ1664_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025390

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025390, complete gene.

LocusTag

OJ1664_D08.107

Ensembl Transcript ID

BGIOSGA025390-TA

Ensembl Protein ID

BGIOSGA025390-PA

Length

2382

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:6244935..6247316

Sequence Coding Region

6244935..6245303,6245376..6245500,6245584..6245686,6245794..6245932,6246346..6246623
,6247152..6247316

Genome Context

<gbrowseImage1> name=IndicaChromosome07:6244935..6247316 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:6244935..6247316 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTTCTCCTCCACCGCCGCCGCCGCCTCCACCGCCTTCGTCTCTGGGCACCGCCGACGCGGCGGCGCGTGCCACCTGCTGTCCTCCTCTTTCCTCATCGCGTTCCCGCGCGCCGTCGCGGCGAGGAGGTGCGGCGAGGCGGCCGCGGCGCCGAGGAGGGTGGGCGCGGTGACCGTGCGCGCGCAGGCGGCGGCGGGGGCGGGGAAGAAGAGCGTGCTGATCGTGAACACGAATGGCGGCGGGCACGCCGTGATCGGGTTCTACCTCGCCAAGGACCTGCTCGCCGCGGGCCACGCCGTCACCGTGCTCACCGTCGGCGACGAGGGCTCCGACAAGATGAAGAAGCCGCCCTTCTCCCGCTTCTCGGAGCTGACGAGTGCCGGGGCGACGACGGTGTGGGGCGACCCGGCGGACGTCGGCGCGGCGGTCGGCGGCGGCGCCTCGTTCGACGTCGTCCTCGACAACAACGGCAAGGACCTCGACGCCGTCAAGCCGGTGGTGGACTGGGCGAAGGCGGCCGGCGTGGCGCAATTCCTCTTCGTCAGCAGCGCCGGCATCTACACGCCCAGCGACGAGCCGCCGCACGTCGAGGGGGACGCGGTGAAGGAGAGCGCGGGGCATGTGGGCGTGGAGAAGTACATCGCGGAGCAGTTCGGCAGCTGGGCGTCGTTCCGGCCGCAGTACATGATCGGCTCCGGCAACAACAAGGACTGCGAGGAGTGGTTCTTCGACAGGATTGTGAGGGGGAGGCCGGTGCCGATCCCGGGGTCGGGGATGCAGGTGACGAACATATCGCACGTGCGCGACCTGGCGAGCATGGTGGCGCTCGCCGTGGAGAGCCCCGGCGCGGCGGCGGGGAGGATCTTCAACTGCGTCTCCGACCGCGCCGTCACCTTCAACGGCCTCGTCAAGATGTGCGCCGCCGCCGCCGGCGCCCAGCCGGAGATCCTCCACTACGACCCCGCCGCCGTCGGCGTCGACGCCAAGAAGGCCTTCCCCTTCCGCAACATGCACTTCTACGCGGAGCCGAGGGCGGCGAAGGAGGTGCTTGGATGGAGGAGCTCGACGAACCTGCCGGAGGACCTCAAGGAGAGGTTCGCGGAGTACGCCAGCAGCGGCAGAGGGCAGAAGGAGATGAGCTTCGACCTCGACGACAAGATCATCGCCGCCGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MAFSSTAAAASTAFVSGHRRRGGACHLLSSSFLIAFPRAVAARRCGEAAAAPRRVGAVTVRAQAAAGAGKKSVLIVNTNGGGHAVIGFYLAKDLLAAGHAVTVLTVGDEGSDKMKKPPFSRFSELTSAGATTVWGDPADVGAAVGGGASFDVVLDNNGKDLDAVKPVVDWAKAAGVAQFLFVSSAGIYTPSDEPPHVEGDAVKESAGHVGVEKYIAEQFGSWASFRPQYMIGSGNNKDCEEWFFDRIVRGRPVPIPGSGMQVTNISHVRDLASMVALAVESPGAAAGRIFNCVSDRAVTFNGLVKMCAAAAGAQPEILHYDPAAVGVDAKKAFPFRNMHFYAEPRAAKEVLGWRSSTNLPEDLKERFAEYASSGRGQKEMSFDLDDKIIAAA</aaseq>

Gene Sequence

<dnaseqindica>1..369#442..566#650..752#860..998#1412..1689#2218..2382#ATGGCCTTCTCCTCCACCGCCGCCGCCGCCTCCACCGCCTTCGTCTCTGGGCACCGCCGACGCGGCGGCGCGTGCCACCTGCTGTCCTCCTCTTTCCTCATCGCGTTCCCGCGCGCCGTCGCGGCGAGGAGGTGCGGCGAGGCGGCCGCGGCGCCGAGGAGGGTGGGCGCGGTGACCGTGCGCGCGCAGGCGGCGGCGGGGGCGGGGAAGAAGAGCGTGCTGATCGTGAACACGAATGGCGGCGGGCACGCCGTGATCGGGTTCTACCTCGCCAAGGACCTGCTCGCCGCGGGCCACGCCGTCACCGTGCTCACCGTCGGCGACGAGGGCTCCGACAAGATGAAGAAGCCGCCCTTCTCCCGCTTCTCGGTAGGTAACATTATGGGGGTTCGAGGGCTCACGGCGGCGATGGTGAATGAATGGATGCAATTAATAATGCAGGAGCTGACGAGTGCCGGGGCGACGACGGTGTGGGGCGACCCGGCGGACGTCGGCGCGGCGGTCGGCGGCGGCGCCTCGTTCGACGTCGTCCTCGACAACAACGGCAAGGACCTCGACGCCGTCAAGTACGTCGCCTCCCTCGATTATTCTCCCCCCTCGCTCCGAGCAAGCAGGCGTCCTGACCAAGGTGTTCGACGCGTTCCCGCAGGCCGGTGGTGGACTGGGCGAAGGCGGCCGGCGTGGCGCAATTCCTCTTCGTCAGCAGCGCCGGCATCTACACGCCCAGCGACGAGCCGCCGCACGTCGAGGGGGTAAAGAAACATAACAACCAGATTCGCCGGAGGATTGGCTCGATGAGTTGAGTTCACTGACTGACTTTCTCCGGCCATGTCGGCTCGCCGGCGACGTGCAAATGCAGGACGCGGTGAAGGAGAGCGCGGGGCATGTGGGCGTGGAGAAGTACATCGCGGAGCAGTTCGGCAGCTGGGCGTCGTTCCGGCCGCAGTACATGATCGGCTCCGGCAACAACAAGGACTGCGAGGAGTGGTTCTTCGACAGTAAAATCACCCAAATCCCCCCAACCAAATTCTCCCAAATTTCAAACCGCCCCAAACAACATTCTTCAATTTGAAGACAAAATTGTCAATTTTTTTACTGTAGTCTTTTTTAAAACTATCGAATTAAGACAAAACTGTCGATTCTTTTTTCTTTAACTTTTGAACTATTTCGAAATATGAATAAAAAATTGGCAATTTTTTATGTAAATTATGAATTGTTTGAATTTGAAAACAAAACTTTCAAATTTTTAACTGTAAGTTCTGACAAATCCAAATTATGAGGACAAAACCATCAATTTTTTTTTTGCTGTAAACTTTGAATAAATCCGATTTGTCAAATTGTCGGTGTAAATTTCCAAGAAATATTCGAATTGAAGTCAAGTTATTTTTTTGGTTTCAAATTGTTTTTGCAGGGATTGTGAGGGGGAGGCCGGTGCCGATCCCGGGGTCGGGGATGCAGGTGACGAACATATCGCACGTGCGCGACCTGGCGAGCATGGTGGCGCTCGCCGTGGAGAGCCCCGGCGCGGCGGCGGGGAGGATCTTCAACTGCGTCTCCGACCGCGCCGTCACCTTCAACGGCCTCGTCAAGATGTGCGCCGCCGCCGCCGGCGCCCAGCCGGAGATCCTCCACTACGACCCCGCCGCCGTCGGCGTCGACGCCAAGAAGGCCTTCCCCTTCCGCAACATGGTTAGTACTACTAACCGTTTTTTATTCATGCAGCGGCACATTGCTATTTTGCTCGAATAAAGAAAATGTGATTTTTTTTTATCTCGGGGGAATATCGGATGAAAACTATCGGATAAGTAAGGACTCATCTGTCTTATAAAAAACCCAATCCTGAGGATGTATTTGGACAATGTGTATGTTCAGATATATCTTTAGGATTGAATTTTTTTAGACGCAGGAAGTACGTGTGAAAAATAGACTTAGAAAATTTTTTGAATCTATTCATTTCGCAGGAAAAGAAACAAATTTTAGACGAGTAGAGTTCCTTTTTCTTACTTCAAATAAAGTCGAGGTTGGAAAACGTGGTTCATTCTTGTACTGTCTCTAGTAATTTCTTTTTATATAAATTTAGAAAAAAGAACTTTTAGGCCCGATTCTTAACGGGTTTTCACCCGATATTTTGGATGTGAATTTTATCTTGATATCGATGTTTTTTTTCCCAAAAAGGATGTGATTTTGATATGTTAATGGTTGTGTGAAAATTGTTAGCACTTCTACGCGGAGCCGAGGGCGGCGAAGGAGGTGCTTGGATGGAGGAGCTCGACGAACCTGCCGGAGGACCTCAAGGAGAGGTTCGCGGAGTACGCCAGCAGCGGCAGAGGGCAGAAGGAGATGAGCTTCGACCTCGACGACAAGATCATCGCCGCCGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025390