BGIOSGA025399

From RiceWiki
Revision as of 06:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025399| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025399, complete gene.| tag = OsI_253...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025399

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025399, complete gene.

LocusTag

OsI_25396

Ensembl Transcript ID

BGIOSGA025399-TA

Ensembl Protein ID

BGIOSGA025399-PA

Length

3084

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:6904914..6907997

Sequence Coding Region

6904914..6905019,6905148..6905249,6906232..6906327,6906441..6906472,6906565..6906640
,6907170..6907225,6907724..6907777,6907959..6907997

Genome Context

<gbrowseImage1> name=IndicaChromosome07:6904914..6907997 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:6904914..6907997 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGGGAAAGCCGGCGGCCTCAAGGGCGTCGCCCTCATCGGCGGCGCCGGCGGCAACAGCGCGGTCGCCGGCGCCCTCCACTTCTTCCAGGACCCCTCCACCGGGTATACCGAGGTGAGGGGGAGGGTCACCGGCCTCGCTCCGGGCCTCCATGGCTTCCACATCCACTCCTTTGGCGACACCACCAACGGCTGCAACTCTACCGGGCCCCATTTTAATCCTCACAATAAGTCCCATGGGGCACCATCTGATGATGAAAGACATGTGGGCGACCTGGGAAACATAGTAGCCAACAAAGATGGTGTTGCAGATATCTTCATAAAGGACCTACAGATTTCACTAAGCGGGCCTCATTCCATATTGGGAAGGGCAGTTGTTGTTCATGCTGATTCTGATGACCTAGGAAGGGGTCAAAAATCTAATTGCCAGTCTCTGTTCCTCTGCTGCATTTATGCTAGGTTTGTGGTGGTCATGAACTCAGTAAAACAACAGGAAATGCAGGAGCAAGAATTGGATGCGGTATCATTGGACTTCGATCTGCAGTTTAACAATCTATAG</cdnaseq>

Protein Sequence

<aaseq>MAGKAGGLKGVALIGGAGGNSAVAGALHFFQDPSTGYTEVRGRVTGLAPGLHGFHIHSFGDTTNGCNSTGPHFNPHNKSHGAPSDDERHVGDLGNIVANKDGVADIFIKDLQISLSGPHSILGRAVVVHADSDDLGRGQKSNCQSLFLCCIYARFVVVMNSVKQQEMQEQELDAVSLDFDLQFNNL</aaseq>

Gene Sequence

<dnaseqindica>1..106#235..336#1319..1414#1528..1559#1652..1727#2257..2312#2811..2864#3046..3084#ATGGCAGGGAAAGCCGGCGGCCTCAAGGGCGTCGCCCTCATCGGCGGCGCCGGCGGCAACAGCGCGGTCGCCGGCGCCCTCCACTTCTTCCAGGACCCCTCCACCGGTACGCGTCTCCTCCCTGTAGCTCCGTGCTGTTCACCTGCGCGCACAGCAGCTCGTCTCGTAAGTGAATTGACCTCTTCTCGCTGATGTGATTTTGGTGGACTACTCGATCTCTGCGTGGTTTTTTAGGGTATACCGAGGTGAGGGGGAGGGTCACCGGCCTCGCTCCGGGCCTCCATGGCTTCCACATCCACTCCTTTGGCGACACCACCAACGGCTGCAACTCTACCGGTTCGTTGCCTTCCGTTTCCCTTGCTTGGTTTTGTGACTTAGGTTGTGAAATTGATGGGGGATTTGGCCATTTGGAGCACTGCTCGATAAGATCGTGTATTGCAATTGTGAACTCGCATACTCCTATATTATGTACAAGTAGAATTTACAACGCTAACTACCATAAGAGAAGATAGGCATCTAATTTGAGTTGACTGCTGATCAAAACATGGATAGGACGAAAACGTCACTGAGGTAGGAACTTCGTTTACCAATTGAGTCGTGCTGTGAAGAATTATCAAATGACCGATTTATTTGTTAAAAAGTGCACTGGACAAAACTTTTTTTTTTTGTCGGGACGGCCAAAGATAGGCCGGCCAATTTCATTAAGATTGGGGGAAATAAAGTTTTAATTACAACGACATGAAGGATTTCGCGCCGGTCTCAAGCAAACTCAAGCACTGGACAAAACTGTTGGTTGTATTTATGTGTGCACTACAAAAAGAGATTGTCACGCCTCCCGCAGAGTTTTTATGAGTTACAATGCCTTCGGCAAGCCTATGGAAACACTACTATTAGCCTTTGCCCAATGAATGATGGATCATGGAATGGGTAGTGAGTGTACTCAGGTGAAAGTTTTGGGGAACTGCATAAGCTCAATGTATGCTGCAAAAAATGTTTCCAATACAGAATCATCTGCTCACCCTTCCATTCTAATTGTCCTGTTCAAATCTTGCTACTGCATTTTTAAGTGAATGGTTTTCATTTCTTTTATTTAGGGTTTGTTTTTCATGAAAATTTGACTTTTTTCTTCTTCACGTGTACGGGGTCTATATTTGAAATGTTATGGAGAGATGGATAACATCAAACTCTATGTTACTAGATTTATTTGAGAATTTTCATAACCCAAGTTGGGGGTGCTCCATGGAGCAGCTGAAGTGTTCTCTCATGCCATCTTGCAATTGTTATTTTTCATTTGTTCTGATTAAACTACTTGTCCCAGGGCCCCATTTTAATCCTCACAATAAGTCCCATGGGGCACCATCTGATGATGAAAGACATGTGGGCGACCTGGGAAACATAGTAGCCAACAAAGATGGTTAGCACTCTGTCAGGCCGTCTACATTAAGACCTTTGAGGCAACTAACGCAAAGAAACTTTGTAAATTAATTCATGTGTGTCTACCAATAATACATCACCTTTTTGTTCCAGGTGTTGCAGATATCTTCATAAAGGACCTACAGGTTCCATTGTCTTGAAATATGTAAAATATCAGTTTGTTCATCTTATTGTTTATGCTAATGCATTGGTAATTCATATTCATTGCTTTGTGAAGATTTCACTAAGCGGGCCTCATTCCATATTGGGAAGGGCAGTTGTTGTTCATGCTGATTCTGATGACCTAGGAAGGGGTAAGCATTATGTCATTACTCTTGCAAGATTGTTATTGGTCATTCAGAATTGAAGAGAAGTCTCCCTTCCTACATTATATATGTCCTCTTATTTTAGAAAATATTGAATTCACTATTTAGAGGGTAATTTAGAGCTTATTACCTGCTGAATGGCGTGCTATCATGCATTTGAATATTCATATAACTATTTAACGTAGAAGTTCCCTTGTTAGCTATGGTTGATATGGGATTATTCGGTGTTCCAAAGCTGCCTGAGATTTGGCTCTTCAACCTTGAGTGTAACTACTAGTAAAAATCATATTCATAAGACAGGTAATCCCTCCCAAGCCCAACTAACCTGGGATATGCTGAATTGCTGATAGCTGTCATGAAATTATTGTGGACTGTGGTACTATGTTAACATACAGTAGGGTATAAATCATAATCCAGTAGGCAAGGGCCCAAAACAGGTCCAGATAACAGGATTTGCATGGGCTGTACCATGCTGCAGTTCAAAATCTAACTGCCCATGGGCTGTACAATGCTACAGGTCAAAAATCTAATTGCCAGTCTCTGTTCCTCTGCTGCATTTATGCTAGGTTTGTGGTAGCAGAAAAATGTTACTGTGGTGCCTTAAGAAATACATTTCTAGCAATCTAGATCTAGGATTCTGGCACTATCTATGCTGCATTGTTTTGCCAATTATTTTCAGTGCCTCCAGAGGCCTTTTTATACATTATTTGTGCAAGACATGTCCTAGGAGTTGGGATGATAAAGCTCTTGCCATTACCATCAATAACTGCGTCATACTCAATTCTGAACAACATCTGTTTGTGTCCAATTATTTAAGTATGAAATATTTTGGTATAATATTTTTCTCTCCTGTTCAAACTCTATGTTCCATTTGTTAACAATTGGCTAACTTTGACTAGTGGTAGGTTCCAAAATACATGCTCAAGTATCCATCAGTTGAGTCAAATTACGGATTGCGAGCCTAATGTTAGAATAGGTTTCATGCACAATTATGTTTTGCCATTTAGTATCACATGGTGAAGCATTCACTTTTTATGCTGCTGCTCATTGTACTACTTTGATATTTTGAAGGTGGTCATGAACTCAGTAAAACAACAGGAAATGCAGGAGCAAGAATTGGATGCGGTAAGTGAGAATCTTTTTGTAGTTTCTGAAACTGAGAGGAGGAAAGAACCATTCGGACATACTAGTACTCAGGAACACATAGGACAAATATTGTACAAAATAAAAAGAAACTTTTTTTTTCTCTGCAAGACCGATCCTTCCAGTGGAATGACAAGCTAATATGTCTGCTAATAACTTGTAGGTATCATTGGACTTCGATCTGCAGTTTAACAATCTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025399