Os12g0140300

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Revision as of 10:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0140300| Description = Conserved hypothetical protein| Version = NM_001072654.1 GI:115487269 GeneID:4351466| Length = 3045 bp| Definition ...")
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Gene Name

Os12g0140300

Description

Conserved hypothetical protein

Version

NM_001072654.1 GI:115487269 GeneID:4351466

Length

3045 bp

Definition

Oryza sativa Japonica Group Os12g0140300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1948623..1951667

Sequence Coding Region

1949481..1949786,1949851..1949976,1950075..1951562

Expression

GEO Profiles:Os12g0140300

Genome Context

<gbrowseImage1> name=NC_008405:1948623..1951667 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1948623..1951667 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgacgtatccaagaggtgctctccggaggaggaggtaattgctgacatactgttcgctctgccgagagggcctcgccccgttcttctccgccgccgaggagaaatcaaccgcaccggcggcgattcaactcgagatggagactcagcggagaagtctcgcaccggcagggggcatgaaatacgggggagagctggcggcgttgaagcggaggcagccaggggcgggtactcgagagaggatctcgccaccaaggggggatccgtcggatcgagggatggcggcggcgaggcctttcaatcaaagagggaaggtgccctgaggtacagatgcactatcgaggacctctccacctcgaagggacccggtggcggcgggggctatgactatgaattagtggggaggggtggagtcgcggcagcggagcgggacacgaggtgcaggtactcggtccaggacctctcgaccgtggggaaatctggggggatgtatgatggaggcaatggccctgggttcaaagaaggtgcccaagaaactgtagattgtgtccaagggttcaagactcatcctgagttaggacttcctgccaatgattctggcactgacacggaaacagttgatgtatcagtgtcagaagagttgattcggcttcagaccacgatcagtaagcccaagactaatactgctactgatgattctgccgatgattctgctgctgaaatcgaagcatttgatgtatcggaagaattgattcgctttcagactgttgttagtaaaccatgggatgcaatatggagagaagcacctctggtcttctgtgattcgttcctatgtcctactggtgataggagtggtttgagtcaaagtgaactgaaagatgcagtagcttcaatacttcttaatcataaaggtgttgtaagctatttcaggattgactcaagtagatcactgaaccttcaaactcttgagacctggtttaatatcttgtctgagaagaaggtcaaagagatggttctgtttaattgttcaggaccacagaaattgatagagtttcctatggatatcctggatggcagccaagttgaggttctcaggatatgttttttcaaaattccagaagtttatgcatttgatctctcaaagctacatctactggatttctcatactgcaaatttgataccgagcacctccttcactttgttgaagcatgtcctaatatcagagagctgcatctgggctactatgatggaaatgtccggatacgctctgacaagctagaaatttttcaagtatggtgttcaactatgaagtctgtgaacattgagcatgctcctgaattgagaaaacttaccatagcggcatttcctggaaagtactcatcctcattgtctgtgagggtcataaactcactttacttggagcatatcacgtgcaacatcagtaatcaatggattacaataaatggctcaaatatacaaacagatgataaagttcttctcaatgtccgaaaactgtacattggactttctatgtccaaaagaaggcaacgggaacagctctctaacattttgaattgcttaacgcatctagaagatctgactatttggcggatggataccgtcgctaacaatgaagattatgatgcggcactcgaggactggtcacctaaactgcgtgtgaagacctgcttgaaaagcctccaaatatgtaagatggaaggataccaaggtgggaagcttgagtcggactttgcatctgctgttctggtgcgtgcaaatcgcttgaaaaggcttataattgaatccgataaggaagatgtctttaagaaggctgttggcatacttcaaaaggtcaagtggacgtcacccgatgtcagtgtagagagaagactaaatccactggtcagcaactga</cdnaseq>

Protein Sequence

<aaseq>MADDVSKRCSPEEEVIADILFALPRGPRPVLLRRRGEINRTGGD STRDGDSAEKSRTGRGHEIRGRAGGVEAEAARGGYSREDLATKGGSVGSRDGGGEAFQ SKREGALRYRCTIEDLSTSKGPGGGGGYDYELVGRGGVAAAERDTRCRYSVQDLSTVG KSGGMYDGGNGPGFKEGAQETVDCVQGFKTHPELGLPANDSGTDTETVDVSVSEELIR LQTTISKPKTNTATDDSADDSAAEIEAFDVSEELIRFQTVVSKPWDAIWREAPLVFCD SFLCPTGDRSGLSQSELKDAVASILLNHKGVVSYFRIDSSRSLNLQTLETWFNILSEK KVKEMVLFNCSGPQKLIEFPMDILDGSQVEVLRICFFKIPEVYAFDLSKLHLLDFSYC KFDTEHLLHFVEACPNIRELHLGYYDGNVRIRSDKLEIFQVWCSTMKSVNIEHAPELR KLTIAAFPGKYSSSLSVRVINSLYLEHITCNISNQWITINGSNIQTDDKVLLNVRKLY IGLSMSKRRQREQLSNILNCLTHLEDLTIWRMDTVANNEDYDAALEDWSPKLRVKTCL KSLQICKMEGYQGGKLESDFASAVLVRANRLKRLIIESDKEDVFKKAVGILQKVKWTS PDVSVERRLNPLVSN</aaseq>

Gene Sequence

<dnaseqindica>1882..2187#1692..1817#106..1593#cggagccgcctctatccccctccttctcccggtgaccccggcactccgccgatccgcttctcctcctcaaaccctctcttctccggcaagctccgaggcgtagccatggcggacgacgtatccaagaggtgctctccggaggaggaggtaattgctgacatactgttcgctctgccgagagggcctcgccccgttcttctccgccgccgaggagaaatcaaccgcaccggcggcgattcaactcgagatggagactcagcggagaagtctcgcaccggcagggggcatgaaatacgggggagagctggcggcgttgaagcggaggcagccaggggcgggtactcgagagaggatctcgccaccaaggggggatccgtcggatcgagggatggcggcggcgaggcctttcaatcaaagagggaaggtgccctgaggtacagatgcactatcgaggacctctccacctcgaagggacccggtggcggcgggggctatgactatgaattagtggggaggggtggagtcgcggcagcggagcgggacacgaggtgcaggtactcggtccaggacctctcgaccgtggggaaatctggggggatgtatgatggaggcaatggccctgggttcaaagaaggtgcccaagaaactgtagattgtgtccaagggttcaagactcatcctgagttaggacttcctgccaatgattctggcactgacacggaaacagttgatgtatcagtgtcagaagagttgattcggcttcagaccacgatcagtaagcccaagactaatactgctactgatgattctgccgatgattctgctgctgaaatcgaagcatttgatgtatcggaagaattgattcgctttcagactgttgttagtaaaccatgggatgcaatatggagagaagcacctctggtcttctgtgattcgttcctatgtcctactggtgataggagtggtttgagtcaaagtgaactgaaagatgcagtagcttcaatacttcttaatcataaaggtgttgtaagctatttcaggattgactcaagtagatcactgaaccttcaaactcttgagacctggtttaatatcttgtctgagaagaaggtcaaagagatggttctgtttaattgttcaggaccacagaaattgatagagtttcctatggatatcctggatggcagccaagttgaggttctcaggatatgttttttcaaaattccagaagtttatgcatttgatctctcaaagctacatctactggatttctcatactgcaaatttgataccgagcacctccttcactttgttgaagcatgtcctaatatcagagagctgcatctgggctactatgatggaaatgtccggatacgctctgacaagctagaaatttttcaagtatggtgttcaactatgaagtctgtgaacattgagcatgctcctgaattgagaaaacttaccatagcggcatttcctggaaagtactcatcctcattgtctgtgagggtcataaactcactttacttggagcatatcacgtgcaacatcagtaatcaatggattacaataaatggctcaaatatacaaacagtacgtgagctgtgatcatataagcacaattgtactacttggagcaataacccaatactgcatactaactatttgttactttatttgtgttgcaacaggatgataaagttcttctcaatgtccgaaaactgtacattggactttctatgtccaaaagaaggcaacgggaacagctctctaacattttgaattgcttaacgcatctagaagatctgactatttgggtaagtattcaaagctgttgtgctcactcttgttctttatacttttactgaccctattttacagcggatggataccgtcgctaacaatgaagattatgatgcggcactcgaggactggtcacctaaactgcgtgtgaagacctgcttgaaaagcctccaaatatgtaagatggaaggataccaaggtgggaagcttgagtcggactttgcatctgctgttctggtgcgtgcaaatcgcttgaaaaggcttataattgaatccgataaggaagatgtctttaagaaggctgttggcatacttcaaaaggtcaagtggacgtcacccgatgtcagtgtagagagaagactaaatccactggtcagcaactgacagtcgaaggtaaagctggttttctttcgaagcatgtagacctataattgatttgcatatgacaagaaatgtaaactctgtgatattcctattctctggcaatctactgattttcaaaaagaaccagacaacctcttagcgagtccctggtaagaactaaaaaaaatgaagatgattggagaacatttgacattttcttgtgttcaatattcacatttgatcattgtcaatggaagaattcaatatttcgaccagtacttttatgcataggatttttaaccttccctctgtttatctctaaaagataaccttataagatcttgttaattgtagatgctgtaatttggggtatttggaaaacaagaaacaaagcatgttttgaaaacaaattgcctactgaccccactgacattgttttcttgacctgctattggattgaatcttgggctttcttgcagacaacggaggcaagtcaagaaaaattgccactggaagccaagctaataaggcaagttgcgaatgatgttttcaactcaaagtttggatggaacgctggaacaaggaggctgggagcatagagatgtgaagatgttgaccctgctgcaatttgtcaccagaattgtggaagttttttgtgttgggccctgtgaagctgatctggtgtctctttgctgcagttagctagactttgttttttgtttggcagctctgcttttctttctgtttagtcttctatggcctgccctgtttccctggaagaaacttatgttattctgttgctcttttctttctgctgtaagaaccttgtagactgtatccatttctgataatagaaatgtgggctatgacccttgatct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0140300, RefSeq:Os12g0140300