BGIOSGA025426

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Revision as of 06:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025426| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025426, complete gene.| tag = P0407H1...")
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Gene Name

BGIOSGA025426

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025426, complete gene.

LocusTag

P0407H12.124

Ensembl Transcript ID

BGIOSGA025426-TA

Ensembl Protein ID

BGIOSGA025426-PA

Length

3689

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7599098..7602786

Sequence Coding Region

7599098..7599516,7599619..7599644,7599768..7599798,7599882..7599969,7600081..7600226
,7600841..7600885,7600976..7601079,7601176..7601312,7601753..7601854
,7602574..7602786

Genome Context

<gbrowseImage1> name=IndicaChromosome07:7599098..7602786 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:7599098..7602786 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCTGGATCTCAATGTGGAGTCGCCGGGTGGGTCGGCGGCGACGTCGAGCTCGTCCACGCCGCCGCCGCCGCCCGACGGTGGCGGCGGGGGGTACTTCCGGTTCGACCTGCTCGGCGGGAGCCCCGACGAGGACGGGTGCTCCCTGCCTGTCATGACGCGCCAGCTCTTCCCTTCGCCGTCTGCGGTGGTGGCGCTGGCGGGGGACGGGTCGTCGACGCCACCGCCGACGATGCCGACGCCGGCGGCGGCTGGGGAGGGGCCGTGGCCGCGCCGCGCGGCGGATCTCGGGGTGGCGCAGAGCCAGAGGTCCCCCGCCGGCGGGAAGAAGAGCCGCCGCGGCCCGAGGTCTCGGAGCTCCCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGGCGATGGGAGTCGCACATCTGGGACTGCGGGAAGCAGGTGTACCTGGGTGGTTTCGATACAGCTCATGCCGCAGCGAGGGCCTATGATCGCGCGGCGATCAAGTTCAGAGGCCTCGACGCGGATATCAACTTTAATCTGAATGACTATGAGGACGACTTGAAGCAGATGCGCAATTGGACCAAGGAGGAGTTTGTGCACATACTTCGGCGCCAAAGCACAGGATTTGCAAGGGGGAGCTCAAAGTACCGGGGTGTGACACTGCACAAGTGTGGCCGGTGGGAAGCTCGGATGGGCCAGCTGCTCGGCAAGAAGTACATCTATCTAGGATTGTTTGACAGTGAAATTGAGGCTGCAAGAGCATATGACCGGGCAGCTATCCGCTTCAATGGAAGGGAAGCTGTTACTAATTTTGATCCTAGTTCTTATGATGGAGATGTTCTACCTGAAACCGACAATGAAGTGGTTGATGGAGACATCATTGACTTAAATCTGAGAATTTCACAGCCTAACGTTCATGAGCTGAAAAGTGATGGTACCCTAACTGGGTTCCAGTTGAATTGTGATTCTCCTGAAGCTTCAAGTTCTGTTGTTACTCAGCCAATAAGTCCTCAGTGGCCTGTGCTTCCTCAGGGCACATCGATGTCCCAGCATCCACATTTATATGCATCTCCTTGTCCGGGCTTCTTTGTGAACCTCAGGGAAGTACCTATGGAGAAAAGACCTGAGTTGGGTCCCCAGTCGTTCCCTACTTCGTGGTCATGGCAAATGCAGGGCTCCCCTTTGCCATTACTCCCTACTGCAGCATCATCAGGATTCTCTACGGGCACCGTCGCCGACGCCGCCCGCGCGCCTTCCTCCCGCCCCCATCCATTTCCCGGCCACCACCAGTTCTACTTCCCCCCGACCACCTGA</cdnaseq>

Protein Sequence

<aaseq>MVLDLNVESPGGSAATSSSSTPPPPPDGGGGGYFRFDLLGGSPDEDGCSLPVMTRQLFPSPSAVVALAGDGSSTPPPTMPTPAAAGEGPWPRRAADLGVAQSQRSPAGGKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLNDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGREAVTNFDPSSYDGDVLPETDNEVVDGDIIDLNLRISQPNVHELKSDGTLTGFQLNCDSPEASSSVVTQPISPQWPVLPQGTSMSQHPHLYASPCPGFFVNLREVPMEKRPELGPQSFPTSWSWQMQGSPLPLLPTAASSGFSTGTVADAARAPSSRPHPFPGHHQFYFPPTT</aaseq>

Gene Sequence

<dnaseqindica>1..419#522..547#671..701#785..872#984..1129#1744..1788#1879..1982#2079..2215#2656..2757#3477..3689#ATGGTGCTGGATCTCAATGTGGAGTCGCCGGGTGGGTCGGCGGCGACGTCGAGCTCGTCCACGCCGCCGCCGCCGCCCGACGGTGGCGGCGGGGGGTACTTCCGGTTCGACCTGCTCGGCGGGAGCCCCGACGAGGACGGGTGCTCCCTGCCTGTCATGACGCGCCAGCTCTTCCCTTCGCCGTCTGCGGTGGTGGCGCTGGCGGGGGACGGGTCGTCGACGCCACCGCCGACGATGCCGACGCCGGCGGCGGCTGGGGAGGGGCCGTGGCCGCGCCGCGCGGCGGATCTCGGGGTGGCGCAGAGCCAGAGGTCCCCCGCCGGCGGGAAGAAGAGCCGCCGCGGCCCGAGGTCTCGGAGCTCCCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGGCGATGGGAGTCGCACATCTGGTTAGCTTCGCCTTGCTCGATTTCCCTCACGCTGACTTCCTCTGCTTGACTCTGCTTGATTGGAGTAGTAATCTCTTCGTTTGTCTCGTCCAATTTTGGCAGGGACTGCGGGAAGCAGGTGTACCTGGGTGAGCTCCTATTTCTAGTCTCCCAAGCTAAATTCGCTCGCATGACTGCTAAATTTGGCTCTCTACTTAGCTTGATTCCGATTTGTTTGCTCCTGCCTTGTTTTTTTTTTTTTCTGTTTTCAGGTGGTTTCGATACAGCTCATGCCGCAGCGAGGTTACTATAGATGGTCACCAATTGTATCTTAATTGTTGCTCTGGTTTGCCCTGTGTGCTGAGATTGTAGAACCCCTTGTGCAGGGCCTATGATCGCGCGGCGATCAAGTTCAGAGGCCTCGACGCGGATATCAACTTTAATCTGAATGACTATGAGGACGACTTGAAGCAGGTTGTTTGGAATATAGTTCAATTGTCATGTGTGATTCTTTAGGTTCTAAGGGGAGGTTCAGTCACCGGCCTGTGATGGTTTATGATGGATTGGTTCGTGCTGTGTTGTTAGATGCGCAATTGGACCAAGGAGGAGTTTGTGCACATACTTCGGCGCCAAAGCACAGGATTTGCAAGGGGGAGCTCAAAGTACCGGGGTGTGACACTGCACAAGTGTGGCCGGTGGGAAGCTCGGATGGGCCAGCTGCTCGGCAAGAAGTAAGATCCCTGAAACATTGATTGTTCTTGCTAGTAACTTACAATACAATACATTTTAGATTAGTTCAGGACCATTTTTCATGCCATGAACGAAAACTGTGTCAAGTTTGCTTTTCAAAAAGGGAAAGAAAAAAAATGTGTCACTACCAAGCTGGAGAATGGTAGGCTACCCCTGGAGTCCACATCCACCTGAAGATTTGGCACCTTGATGTTGACTCTTCACACACTGGCCATTTACTATTGGAACACCACAGGTGTTCAGTGATTATAGATTGCTAGCTTCTTTAGGAAAGAACTAAGTGAATCGGAATGGCTCAACGGAATTAATTGAGGGGAAATGTTTTTGTTTCCTTGGGGATTGTGTTTTGCGTCCTAAGTCAGTGACAGGTGAAAAGCTTCATTTCAATGCTCTTGGTTGTTTTTGCCACTAAGAATGTTCTGCTTATTTACGTTGAATTTTTGATTGGCTGTTCGTATCATAGTTGTGCATTTCCTATATATTACAATCTTTGTGAACTTTAGATAATTCTGGCATGAGCTCTCTCTGTGGTATTGTTCTATTAACAGAAGTATCATTCTGTCAATTCCCCACTGATAAGTGATCTTTTGTGCAGGTACATCTATCTAGGATTGTTTGACAGTGAAATTGAGGCTGCAAGGTTCAGCTAGTAGTACTTTGCTCTTCTCAGTTTGATATGTGCTTGCTATTCCTATACTTCTCTCACTTTCATCTACTCTTCAACTTGTAGAGCATATGACCGGGCAGCTATCCGCTTCAATGGAAGGGAAGCTGTTACTAATTTTGATCCTAGTTCTTATGATGGAGATGTTCTACCTGAAACCGACAATGAAGGTATTTCTTTTGTACTATGTATATTGTGCTTTATCCACTAGAACGACAAATCCAAATTTTATATTAACAAAAGCACACTGGGGATTGTCTTAGCAGTGGTTGATGGAGACATCATTGACTTAAATCTGAGAATTTCACAGCCTAACGTTCATGAGCTGAAAAGTGATGGTACCCTAACTGGGTTCCAGTTGAATTGTGATTCTCCTGAAGCTTCAAGTTCTGTTGTTACTCAGGTAAATATGCTACAATATTTGGTGTTTGTAACCGCTATACCATTTGAGATTTGACCGTCTTCAGATTCTTTTGATCAGGTGGTTAGTCCTTTTTCATAACATTATACTATCACTTTCAAAATAATTAGTACACTAATTGTATGTGTCACTAGAATTGTTGTATGAAACCATCTGGGAACCATCTTATGCAGCTTATTGACAAATGACAACTCACTGTTGATGTATTCCCAAATCAAGAAAAGCCAATCTTTTTATTCAATTTCTCCAGTTCATTGAATTGAAAAAGAAATTGCCGAACAACTACCACCTGAAGAGACTGGCTAGATATTTTGTTTATCTGTGTATTTTTATAACCTATAACAGTTCCAAAGCCACAAAGCTCTTTTACCTTGATTCTGATAACGTTAACTGAGGTATCATTTTGTGATTGTTTTCTGTAGCCAATAAGTCCTCAGTGGCCTGTGCTTCCTCAGGGCACATCGATGTCCCAGCATCCACATTTATATGCATCTCCTTGTCCGGGCTTCTTTGTGAACCTCAGGGTATATCTATCATCAAAACTTATATGCAATTTGAAAAGACAGTTAAACTTGTTTCAAGTTAACATTCGATTGCTAATTAGCTACTACTTCCATGCTCCTATTTCTTGAGATGACGAACCATATGTTTGTTCCTTTAATTACATAATGGTAGCCGTAGATACTGTTTGCCTTGTGAACTGTCAGATATAGCAGGAAGTAAATCTGTCAGCTTGCAACTTTCCATGAACCACAGCTGTCCAACTTTATACAGTGGATGATGACTTGCATTTGATACATCCTAGTACTTTCTTGTTGCACTCTGCAGCTTTAGCTCTGAAGATGCTCTATATTTCCATGAATGCTCACGTTAGCTCTGAAATTTCGAACTTTCACTCCATAACATGCTCATTTAGGCTGTGTTTAGATCCAAACTTCAGTTCTTTTCCATCACATCAACCTGTCATACACACACAACTTTTCAGTCACATCATCTCTAATTTCAACCAAAATCCAAACTTTGCCATCAACTAAACACAGCCTTATTCATTGTTCCACCTTTTATTTCTGCCATTGCTATGGTCCAATCTTGATACCTCAGAGAGCTGCATGATGTGTAGAAGTCCTAACTTAGGTCCGTTGGTTAGAATCATCCATTCATGTTTAGGAAAAGTGATTAACAACGTGTGCTGCATTAACCATTAATGTGGTCAACTCTGATGCTTGTGCTATGGTCACTGCAGGAAGTACCTATGGAGAAAAGACCTGAGTTGGGTCCCCAGTCGTTCCCTACTTCGTGGTCATGGCAAATGCAGGGCTCCCCTTTGCCATTACTCCCTACTGCAGCATCATCAGGATTCTCTACGGGCACCGTCGCCGACGCCGCCCGCGCGCCTTCCTCCCGCCCCCATCCATTTCCCGGCCACCACCAGTTCTACTTCCCCCCGACCACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025426