BGIOSGA025466

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Revision as of 06:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025466| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025466, complete gene.| tag = OsI_255...")
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Gene Name

BGIOSGA025466

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025466, complete gene.

LocusTag

OsI_25542

Ensembl Transcript ID

BGIOSGA025466-TA

Ensembl Protein ID

BGIOSGA025466-PA

Length

4888

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8545225..8550112

Sequence Coding Region

8545225..8545510,8545586..8545785,8545891..8546002,8546093..8546261,8546897..8547163
,8547251..8547596,8547682..8547819,8547915..8548040,8548140..8548352
,8548439..8548727,8548817..8549013,8549097..8549243,8549528..8550112

Genome Context

<gbrowseImage1> name=IndicaChromosome07:8545225..8550112 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:8545225..8550112 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGAGCGCGGGGCTGGTGGCGGGGTCGCACAACCGGAACGAGCTGGTGGTGATCCGGAGGGATGGAGGAGGAGGGGGAGGGGTTGGGGGGAGGAGGGCGGCGGAGGCGAAGGCGGCGTGCCAGATATGCGGCGACGACGTCGGGGAAGGGCCCGACGGGGAGCCATTCGTGGCGTGCAACGAGTGCGCCTTCCCCGTCTGCCGCAACTGCTACGACTACGAGCGCCGCGAGGGCTCGCAGGCTTGCCCCCAGTGCAAGACCCGCTTCAAGCGCCTCAAGGGGTGCCCGCGGGTGGCCGGAGACGAGGAGGAGGACGGCGTGGACGACCTGGAGGGGGAGTTCGGCCTCGACGGCCGGGAGGACGACCCGCAGTACATCGCCGAGTCGATGCTGCGCGCGAACATGAGCTACGGCCGCGGCGGCGACCTGCAGCCGTTCCAGCCCATCCCCAATGTGCCGCTCCTCACCAATGGCCAGATGGTTGACGACATCCCGCCGGAGCAGCACGCGCTGGTGCCATCCTACATGGGGGGCGGCGGCGGCGGCGGGAAGAGGATCCACCCGCTCCCCTTCGCAGATCCGAGCGTTCCTGTGCAACCGAGATCCATGGACCCGTCCAAGGATCTCGCCGCCTACGGGTACGGGAGTGTGGCATGGAAGGAGAGGATGGAGGGCTGGAAGCAGAAGCAGGAGCGGATGCAGCAGCTCAGGAGTGAGGGCGGCGGCGACTGGGATGGCGACGGCGATGCAGATCTGCCACTAATGGATGAAGCTCGACAACCACTATCTCGCAAAGTTCCAATTTCTTCAAGCCGAATTAATCCCTATAGGATGATTATAATTATCCGGTTGGTGGTTTTGGGGTTCTTCTTCCACTACCGAGTGATGCATCCTGTGAATGATGCATTTGCTTTGTGGCTCATCTCTGTAATATGTGAAATCTGGTTTGCTATGTCTTGGATTCTTGATCAATTTCCAAAGTGGCTTCCCATAGAGAGGGAGACGTACCTGGACCGCTTGTCACTGAGGTTTGACAAGGAAGGTCAGCCATCTCAACTTGCTCCAGTCGACTTCTTTGTCAGTACAGTTGATCCATCAAAGGAACCTCCCTTAGTCACAGCAAACACCGTCCTTTCCATCCTTTCTGTGGATTACCCGGTTGAAAAGGTTTCCTGCTATGTTTCTGATGATGGTGCTGCAATGCTCACATTTGAAGCACTGTCAGAAACATCTGAATTTGCAAAGAAATGGGTCCCTTTCTGCAAAAAGTTCAATATCGAGCCTCGTGCTCCAGAGTGGTACTTCCAGCAGAAGATAGACTACCTGAAAGATAAGGTAGCAGCGTCCTTTGTTAGGGAGAGGAGAGCAATGAAGAGAGATTATGAGGAATTCAAGGTGAGGATCAACGCCTTGGTTGCCAAAGCCCAAAAGGTTCCAGAGGAAGGATGGACAATGCAGGACGGAAGCCCTTGGCCAGGCAACAATGTGCGCGATCATCCTGGAATGATTCAGGTCTTCCTTGGCCAAAGTGGTGGCCGTGATGTGGAAGGAAATGAGCTTCCTCGCTTGGTTTATGTCTCAAGAGAAAAGAGGCCAGGCTATAATCATCATAAGAAGGCTGGTGCTATGAATGCATTGGTCCGCGTCTCTGCTGTTCTTTCGAATGCTCCATACCTATTGAACTTGGATTGTGATCACTACATCAACAATAGCAAGGCCATAAGGGAAGCGATGTGTTTCATGATGGATCCTTTGGTGGGGAAGAAAGTGTGCTATGTGCAGTTCCCTCAGAGGTTTGATGGTATTGACCGACATGATCGATATGCTAACCGGAACGTTGTCTTTTTCGATATCAACATGAAAGGTCTGGATGGAATTCAAGGCCCCATCTATGTTGGTACTGGATGTGTCTTCAGACGGCAAGCTCTCTATGGTTATGATGCGCCAAAAACAAAGAAGCCCCCATCCAGAACTTGCAATTGCTGGCCTAAATGGTGCTGCTGCTGCTGTTGTGGTAACAGGCATACTAAGAAGAAGACAACAAAACCTAAGCCGGAGAAAAAGAAAAGACTGTTTTTCAAGAAAGCAGAAAATCAGTCTCCTGCATATGCTCTTGGTGAAATTGAGGAAGGTGCTCCAGGAGCTGAGACAGACAAAGCTGGAATTGTGAATCAACAGAAGCTAGAAAAGAAATTTGGGCAGTCTTCTGTTTTTGTTGCATCAACTTTGCTTGAAAATGGTGGAACCCTGAAGAGTGCAAGTCCAGCTTCTCTACTGAAGGAAGCTATACATGTTATTAGCTGTGGTTACGAAGACAAGACAGACTGGGGGAAGGAGATTGGCTGGATCTATGGTTCAATTACAGAAGATATCTTGACTGGGTTTAAGATGCATTGCCATGGTTGGCGGTCTATTTACTGCATTCCAAAGCGGCCAGCATTCAAAGGTTCTGCACCTCTTAATCTTTCGGATCGTCTTCACCAGCTCACCAATGTTGCTAGTCTATGGTTCATGTCGCTTTTCATCTGTATTTTTGTCACTGGCATCCTTGAAATGAGATGGAGTGGTGTGGCCATCGATGACTGGTGGAGGAATGAGCAGTTTTGGGTCATTGGAGGTGTTTCTTCACATCTCTTCGCTGTATTCCAAGGACTTCTGAAAGTCCTTGCTGGTGTTGATACCAGCTTCACTGTGACATCAAAGGCCGGAGATGATGAAGAGTTCTCAGAGCTATACACGTTCAAATGGACCACCTTGTTGATACCTCCAACTACACTGCTGCTGTTGAACTTCATTGGGGTTGTAGCTGGAGTTTCTAATGCTATCAACAATGGATATGAATCATGGGGACCTCTGTTCGGGAAGCTCTTCTTTGCGTTCTGGGTGATTGTCCATCTATATCCGTTCCTCAAGGGTTTGGTTGGAAGGCAAAACAGGACACCAACGATTGTTATCGTCTGGTCCATTCTACTGGCTTCAATCTTCTCACTTCTATGGGTCCGGATCGATCCTTTCCTTGCGAAGAATAATGGCCCTCTTCTGGAGGAATGTGGTCTGGATTGTAACTAA</cdnaseq>

Protein Sequence

<aaseq>MEASAGLVAGSHNRNELVVIRRDGGGGGGVGGRRAAEAKAACQICGDDVGEGPDGEPFVACNECAFPVCRNCYDYERREGSQACPQCKTRFKRLKGCPRVAGDEEEDGVDDLEGEFGLDGREDDPQYIAESMLRANMSYGRGGDLQPFQPIPNVPLLTNGQMVDDIPPEQHALVPSYMGGGGGGGKRIHPLPFADPSVPVQPRSMDPSKDLAAYGYGSVAWKERMEGWKQKQERMQQLRSEGGGDWDGDGDADLPLMDEARQPLSRKVPISSSRINPYRMIIIIRLVVLGFFFHYRVMHPVNDAFALWLISVICEIWFAMSWILDQFPKWLPIERETYLDRLSLRFDKEGQPSQLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYFQQKIDYLKDKVAASFVRERRAMKRDYEEFKVRINALVAKAQKVPEEGWTMQDGSPWPGNNVRDHPGMIQVFLGQSGGRDVEGNELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLSNAPYLLNLDCDHYINNSKAIREAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKTKKPPSRTCNCWPKWCCCCCCGNRHTKKKTTKPKPEKKKRLFFKKAENQSPAYALGEIEEGAPGAETDKAGIVNQQKLEKKFGQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQLTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNNGPLLEECGLDCN</aaseq>

Gene Sequence

<dnaseqindica>1..286#362..561#667..778#869..1037#1673..1939#2027..2372#2458..2595#2691..2816#2916..3128#3215..3503#3593..3789#3873..4019#4304..4888#ATGGAGGCGAGCGCGGGGCTGGTGGCGGGGTCGCACAACCGGAACGAGCTGGTGGTGATCCGGAGGGATGGAGGAGGAGGGGGAGGGGTTGGGGGGAGGAGGGCGGCGGAGGCGAAGGCGGCGTGCCAGATATGCGGCGACGACGTCGGGGAAGGGCCCGACGGGGAGCCATTCGTGGCGTGCAACGAGTGCGCCTTCCCCGTCTGCCGCAACTGCTACGACTACGAGCGCCGCGAGGGCTCGCAGGCTTGCCCCCAGTGCAAGACCCGCTTCAAGCGCCTCAAGGGTGAGCTCTTCCTCCGTCGCCATTGCTCTCTCTGCTCTCTGCTTCTGCTTCGCTCTGACAATGTTGACACGGCAGGGTGCCCGCGGGTGGCCGGAGACGAGGAGGAGGACGGCGTGGACGACCTGGAGGGGGAGTTCGGCCTCGACGGCCGGGAGGACGACCCGCAGTACATCGCCGAGTCGATGCTGCGCGCGAACATGAGCTACGGCCGCGGCGGCGACCTGCAGCCGTTCCAGCCCATCCCCAATGTGCCGCTCCTCACCAATGGCCAGATGGTACGGACCACCACTACCACCACCTCCTCCTCTTCTTCCTCCTCCGATTCCGCTCTCAATTGCTCCGAGATCGAGCGTAATTCGGTGTTTCCGGGTGCCCCCCAGGTTGACGACATCCCGCCGGAGCAGCACGCGCTGGTGCCATCCTACATGGGGGGCGGCGGCGGCGGCGGGAAGAGGATCCACCCGCTCCCCTTCGCAGATCCGAGCGTTCCTGGTGGGTGATCTGGTTTCTGGTTGGAATCTGGTTAGCTTCTGCTGCTGGTGGTGTGAGTTGCTGATCGATGTGCTTGGTGTTTGGTTGCAGTGCAACCGAGATCCATGGACCCGTCCAAGGATCTCGCCGCCTACGGGTACGGGAGTGTGGCATGGAAGGAGAGGATGGAGGGCTGGAAGCAGAAGCAGGAGCGGATGCAGCAGCTCAGGAGTGAGGGCGGCGGCGACTGGGATGGCGACGGCGATGCAGATCTGCCACTGTATGTGACCACCTAACTTTGCTTGCTCACCAAATGTTAGTTAGAACATGTGGTTACAGTGATTAAATGACCGTAGCTGCTTCCCATGGCCTGCCGTTGTCTAATGCTTAGACTATCTTTAGAATTGCTACTAATTGCTATATTAACAGTACATGAACAAACATATATGGAAAGTCTTGTTTGATGGAATGCTAAAAAGAATCTTACTGTAAAAATGCTGACATACTACTATTTTTTTTTGCCAATAACTTAATGTTTTGTTACTTTGTAGAGGATACTCGTAAGCCTATAATTGGACAGATCCCAGAGAAGGAATGCAACTATTTGTGCTAGATTAACATAATTGCCTTACATGGTTTTTACCCGCAGTACATTATTTTTGTTTTATCTTGGCTACTTCACTGTTTGACCATGATTTGTATTTGGGCTTGGTTAGTTTAATATTCATGGAAAATATTATGATGTAATGAAATACTAATTTTTGCATGTCATATGCTTGGAGTTTCATCGTCAATTCTGTATGATGCATAGACACAATAGGTTATAATTTAATTATTATGTAAGGATTTGTCTTTTCCTTGCAAATATTGTTACTAGACTCTGGTTGTAAAGTGTCTCTTTAATCTGTTGACCAGAATGGATGAAGCTCGACAACCACTATCTCGCAAAGTTCCAATTTCTTCAAGCCGAATTAATCCCTATAGGATGATTATAATTATCCGGTTGGTGGTTTTGGGGTTCTTCTTCCACTACCGAGTGATGCATCCTGTGAATGATGCATTTGCTTTGTGGCTCATCTCTGTAATATGTGAAATCTGGTTTGCTATGTCTTGGATTCTTGATCAATTTCCAAAGTGGCTTCCCATAGAGAGGGAGACGTACCTGGACCGCTTGTCACTGAGGTTAGTTAAATCCCCAAACCAAGAAATACTTGCCCTATCCTTTTGCTGAAGGTTTGAAGGTAACAAACTTTTTGCTTGTCTGATCAGGTTTGACAAGGAAGGTCAGCCATCTCAACTTGCTCCAGTCGACTTCTTTGTCAGTACAGTTGATCCATCAAAGGAACCTCCCTTAGTCACAGCAAACACCGTCCTTTCCATCCTTTCTGTGGATTACCCGGTTGAAAAGGTTTCCTGCTATGTTTCTGATGATGGTGCTGCAATGCTCACATTTGAAGCACTGTCAGAAACATCTGAATTTGCAAAGAAATGGGTCCCTTTCTGCAAAAAGTTCAATATCGAGCCTCGTGCTCCAGAGTGGTACTTCCAGCAGAAGATAGACTACCTGAAAGATAAGGTAGCAGCGTCCTTTGTTAGGGAGAGGAGAGCAATGAAGGTAGATGTCCTCATTTGTTCGTGCTTTTCTACTCGATTATTCTTTTTATATTATAGCTAGTTACACAAGTTTAATTTTCATCCAGAGAGATTATGAGGAATTCAAGGTGAGGATCAACGCCTTGGTTGCCAAAGCCCAAAAGGTTCCAGAGGAAGGATGGACAATGCAGGACGGAAGCCCTTGGCCAGGCAACAATGTGCGCGATCATCCTGGAATGATTCAGGTAATGCTTTTGCAATTTTGGTGTTTTACTACACACGTGCGATTCTTCTTTCTGTGTTACTTTAGTTCAAAGTGTTCAATTTTTTGTGTCAATAGGTCTTCCTTGGCCAAAGTGGTGGCCGTGATGTGGAAGGAAATGAGCTTCCTCGCTTGGTTTATGTCTCAAGAGAAAAGAGGCCAGGCTATAATCATCATAAGAAGGCTGGTGCTATGAATGCATTGGTAAAAGATCCTTCACATAATGTCTCGTATCAATTTCCATGTAGATTTACAGCCTTAGCACCGTTTGACATGGTTTTCTCTCTCTTTGTTGTTTGACAGGTCCGCGTCTCTGCTGTTCTTTCGAATGCTCCATACCTATTGAACTTGGATTGTGATCACTACATCAACAATAGCAAGGCCATAAGGGAAGCGATGTGTTTCATGATGGATCCTTTGGTGGGGAAGAAAGTGTGCTATGTGCAGTTCCCTCAGAGGTTTGATGGTATTGACCGACATGATCGATATGCTAACCGGAACGTTGTCTTTTTCGATGTAAGATTCAGCCTCTCTGGTACTAAGACCTTGTGGTCTATATTATGCTTGTTACTATTATGGTTCCTAATATTTGCATTGTACAGATCAACATGAAAGGTCTGGATGGAATTCAAGGCCCCATCTATGTTGGTACTGGATGTGTCTTCAGACGGCAAGCTCTCTATGGTTATGATGCGCCAAAAACAAAGAAGCCCCCATCCAGAACTTGCAATTGCTGGCCTAAATGGTGCTGCTGCTGCTGTTGTGGTAACAGGCATACTAAGAAGAAGACAACAAAACCTAAGCCGGAGAAAAAGAAAAGACTGTTTTTCAAGAAAGCAGAAAATCAGTCTCCTGCATATGCTCTTGGTGAAATTGAGGAAGGTGCTCCAGGTATTGTCAGCTTGTCTAACAATTGTCAAATAACATAAGGTAACATAAGAAAAACATCACAGTAAAACTCAAATGTTTCTTTACTGCAGGAGCTGAGACAGACAAAGCTGGAATTGTGAATCAACAGAAGCTAGAAAAGAAATTTGGGCAGTCTTCTGTTTTTGTTGCATCAACTTTGCTTGAAAATGGTGGAACCCTGAAGAGTGCAAGTCCAGCTTCTCTACTGAAGGAAGCTATACATGTTATTAGCTGTGGTTACGAAGACAAGACAGACTGGGGGAAGGAGGTAAGAAACCTAGACCTGATTATAAACTGATGGTTAATCAATTGAAGACGTTCCTCTCACCTGTAAATCATGTATTCTTGCAGATTGGCTGGATCTATGGTTCAATTACAGAAGATATCTTGACTGGGTTTAAGATGCATTGCCATGGTTGGCGGTCTATTTACTGCATTCCAAAGCGGCCAGCATTCAAAGGTTCTGCACCTCTTAATCTTTCGGATCGTCTTCACCAGGTCCTTCGTTGGGCTCTTGGATCTGTTGAAATTTTCTTCAGCAAACATTGCCCACTTTGGTATGGGTATGGTGGTGGCCTGAAATTTTTGGAAAGATTTTCTTATATTAACTCTATCGTATATCCTGGACATCCATTCCACTTCTGGCTTACTGTACCTTGCCTGCCATATGCTTGCTCACTGGGAAGTTTATCACTCCAGAGGTAAGCATTATTGTGCTACATAATTTTGTGATCTTCTGAGTTTCTGTCTGAATCTTACATCATTTTTATTTCAAACTGCAGCTCACCAATGTTGCTAGTCTATGGTTCATGTCGCTTTTCATCTGTATTTTTGTCACTGGCATCCTTGAAATGAGATGGAGTGGTGTGGCCATCGATGACTGGTGGAGGAATGAGCAGTTTTGGGTCATTGGAGGTGTTTCTTCACATCTCTTCGCTGTATTCCAAGGACTTCTGAAAGTCCTTGCTGGTGTTGATACCAGCTTCACTGTGACATCAAAGGCCGGAGATGATGAAGAGTTCTCAGAGCTATACACGTTCAAATGGACCACCTTGTTGATACCTCCAACTACACTGCTGCTGTTGAACTTCATTGGGGTTGTAGCTGGAGTTTCTAATGCTATCAACAATGGATATGAATCATGGGGACCTCTGTTCGGGAAGCTCTTCTTTGCGTTCTGGGTGATTGTCCATCTATATCCGTTCCTCAAGGGTTTGGTTGGAAGGCAAAACAGGACACCAACGATTGTTATCGTCTGGTCCATTCTACTGGCTTCAATCTTCTCACTTCTATGGGTCCGGATCGATCCTTTCCTTGCGAAGAATAATGGCCCTCTTCTGGAGGAATGTGGTCTGGATTGTAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025466

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025466&oldid=51060"