BGIOSGA025494

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Revision as of 06:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025494| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025494, complete gene.| tag = OsI_255...")
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Gene Name

BGIOSGA025494

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025494, complete gene.

LocusTag

OsI_25594

Ensembl Transcript ID

BGIOSGA025494-TA

Ensembl Protein ID

BGIOSGA025494-PA

Length

3540

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:9733257..9736796

Sequence Coding Region

9733257..9733294,9733476..9733851,9735518..9736040,9736741..9736796

Genome Context

<gbrowseImage1> name=IndicaChromosome07:9733257..9736796 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:9733257..9736796 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGACGCCAGCAGGGGAGAAGAAGAAAATTCGATGTTCGAGACCAGCCACGTCCTCGGCGCGCTGCTCGCCTCCTCGCCGCTGCTGGCGCGGGCGTGGGACCGGTGCGCGGCCGCGGCCGACGGCGGCGCGTCGTCGCTGGGGTTCGTGCACGGCGGCGGCGGGGGAGGGGAAGGGGAGCCGGTGTGCGTGGCGTTCTCCGGGGTGCAGGCGGCGCTGTCGGCGGCGGCGGGCGGCGGCGGCGGGGGCGCCGAGATCTTCAAGCCGGTCGGGCTCCGCGGGGACGCCGCCGGGCGGCTGTTCGCGCCGCTGGTCGCCGCCGAGCCGGAGGACGCCGGCGGGGAGCCGGTCGCCGTGCAGGCGCTGGCGCTGCAGGGGTTCTTGAGGCTGTGCGGATCCCCTGAATTCCAGGTGCTGCTGAACCAGATCAGAGGCAAGGCAGTAGTGTTCACTGGCCACTCCCTCGGTGGTGCCATTGCTGCCCTTGTGGCGCTGCACTACCTTTGCACATCATCGTCAAGCTCAGCATTTGCCCCTGCTCCTCCGGTGCTTTGTGTCACATTCGGGAGCCCGCTGCTTGGCAATCAGGCCCTGTCTAGGGCTATACTGCGTGAGCGGTGGGCCGGCAACTTCTGCCATGTGGTCTCACAGCATGATGTTGTCCCAAGGCTCCTCTTCTGCCCACTCAATGTCATCCCTGTGCACATTGTTGTTGGTATGCAGCTGCACCAGTTGCCGGTGCGCGCGCGCCGTGCAGCCGGTGTGGTGGCCACGGTCACTGCCCGCATGGCTGACACCAACCAGGAGTCGCTGCGGCAGCTGATCCAAGAGCACGCCGGTGAGGCAGCAATTGAGCAGAAGCTTGCTGCTCCGGAAATACCCAGTGGGAGCCCATACCGGCCTTTTGGGGCGTATGTCCTGTGCTCGCCGGATGGAGTTAAGTCTGGAGTGAAGTTGTGGAGCTGCCTAAACCCAGCTCCACAACTCTAG</cdnaseq>

Protein Sequence

<aaseq>MEDASRGEEENSMFETSHVLGALLASSPLLARAWDRCAAAADGGASSLGFVHGGGGGGEGEPVCVAFSGVQAALSAAAGGGGGGAEIFKPVGLRGDAAGRLFAPLVAAEPEDAGGEPVAVQALALQGFLRLCGSPEFQVLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVIPVHIVVGMQLHQLPVRARRAAGVVATVTARMADTNQESLRQLIQEHAGEAAIEQKLAAPEIPSGSPYRPFGAYVLCSPDGVKSGVKLWSCLNPAPQL</aaseq>

Gene Sequence

<dnaseqindica>1..38#220..595#2262..2784#3485..3540#ATGGAAGACGCCAGCAGGGGAGAAGAAGAAAATTCGATGTAAGTTCCCCCTTCTTTTTCCATGGCTTTTCTTCCTCCTTCTCCTCTTCTTCGCGTGTATATAAACCCGCGCGCGCGAAAGCTTTCTTTTCGCGCCCGATTTGGGGGGCGGAAGAAGGAGGAGGAGAAGAAATGGTGGAAACCAAGAAGCTCAAATGCTTCTTCTTCGTCGTCTTGCCAGGTTCGAGACCAGCCACGTCCTCGGCGCGCTGCTCGCCTCCTCGCCGCTGCTGGCGCGGGCGTGGGACCGGTGCGCGGCCGCGGCCGACGGCGGCGCGTCGTCGCTGGGGTTCGTGCACGGCGGCGGCGGGGGAGGGGAAGGGGAGCCGGTGTGCGTGGCGTTCTCCGGGGTGCAGGCGGCGCTGTCGGCGGCGGCGGGCGGCGGCGGCGGGGGCGCCGAGATCTTCAAGCCGGTCGGGCTCCGCGGGGACGCCGCCGGGCGGCTGTTCGCGCCGCTGGTCGCCGCCGAGCCGGAGGACGCCGGCGGGGAGCCGGTCGCCGTGCAGGCGCTGGCGCTGCAGGGGTTCTTGAGGCTGTGCGGATCCCCTGAATTCCAGGTAATTGACCAATTAGCTGAAAATATCTCGAACTAATCCGCCCCATCTAATTGCGCATTTAAGCTCGCTAATTACGCCTCCTGATTTAGTTTTCATCTACGATGATTTGACATTTTTTCTTTCGAGTTATTTTGGGTGCAAGTTATGGTGATGTTGATGTGCCTGTCTCTAGTTGCTTGATATGTCATTATGTTCAGACTTCAGCATATGAGGCTTGAGGGAGTTCGTACTGTGATTTTTTTTTGTTTTATTATTGTAAGGTCAATGATTCTGTTTATTGGGTAACTAATTTAGGAGTCTAATTTGGCAAGGAATTCAACAACAGTTTGTGGAATTCAAACAATAACTGGAGCAACCTTCAGTGAAAATAATGATAATGGTTGCCGTGCCATTACTACCATGTGAAGATTGAGTGCTTCAGTTTCTTCCTCCTTAAGCTAGTTTGGAAGGCTGTATTTTTTTTCTGTTTGTTGTTAGAATTGAACTGATTTCTTTCAAATTGCAGTGAAATTCCCACATTCCTTATTCTGCTGTTTTTTCCCTCCTGATTCATGTATTGCCATCTGAAGCCTTGTGTATATTCCTCTCTGTTATCAATTTGTTTGATTAAATTGGTCCCTTTGACAGTAGAGATTTATATGCACGAGTTTATCTTGGAGCTTATAGGACGTGTACATGTGTTGTAATGTGTACAATCCCTATCAAACTTGGCGGCCAACCCAGAGCACAGATGCTATGCACCTGTCTTTTTGTGTCAATTGAAACCAAAAAGTACGGCACAAATGGCACATTGGCACGTTTGGCAGCACACCGAAATGTTTTTCTTGCTCTTGCTCTTTTGTTGTCACTTTCATTTTGATCCATTTGTGGTGGCCCATGTGTGACAGAGGATGATTAGGCGTGCTGAATACAATGCATGATTGAGAGAATGACCCCTGGCAACACTATGTGGGTAGGGATCTGAATATAATATTTTTTTGGCGTCTGGATCTGAACAAATTCATTGCTGGCATGTGAAAAATGGCGATCCATGATGTGTCATTATCTTCAGATGCGAATAATAAAAGGTTTGAGTATTGATGAATGGAATCTGAAGTATGGACATAGTTGATTTTTGGATGGTAATTTAGATTTAAGCCTGCTTTTGGTATATGTACTTTTCCTGTGCATCTCAGAGATAAACAAGGATATGCAAGAAACTTACAATATACTGAGCTTAGTTATTTCGGATGATTCTTGAATTCTTTAAAGTTTTTAGTTGGCTGTCAGACATATGACCTTCATTCCACTCTTTGAATATAAACTGCAGATAGGTTTTTTGAGGAAAAATAAACTGCAGATTGGTAACTTCAGCATTTGTTGATCTTTTCTATCATGTTTCACCCTGTCTCCATCCGGTGTTATATTTTTCTAGTAGTATTTGTGTTTCATAATCGACTATGTGGCCTATTCTTGTTGACAAATCTTATCTTCATTTCCTTGATGTTTTTGTTGAGCCATCAAAGGTGTTAATGTCCGCAGCTTGTCAATTTAGTCTGTTCGATTATACAGTTAATGCTTCTCTTATACTCATGAATCAAATCTATCTTGAGGCTGCAATTATTTGTGAGACTAGGAAAACTGATCATATCACTTACTAATTGCATTGTGTCGGTTAACACTGCAGGTGCTGCTGAACCAGATCAGAGGCAAGGCAGTAGTGTTCACTGGCCACTCCCTCGGTGGTGCCATTGCTGCCCTTGTGGCGCTGCACTACCTTTGCACATCATCGTCAAGCTCAGCATTTGCCCCTGCTCCTCCGGTGCTTTGTGTCACATTCGGGAGCCCGCTGCTTGGCAATCAGGCCCTGTCTAGGGCTATACTGCGTGAGCGGTGGGCCGGCAACTTCTGCCATGTGGTCTCACAGCATGATGTTGTCCCAAGGCTCCTCTTCTGCCCACTCAATGTCATCCCTGTGCACATTGTTGTTGGTATGCAGCTGCACCAGTTGCCGGTGCGCGCGCGCCGTGCAGCCGGTGTGGTGGCCACGGTCACTGCCCGCATGGCTGACACCAACCAGGAGTCGCTGCGGCAGCTGATCCAAGAGCACGCCGGTGAGGCAGCAATTGAGCAGAAGCTTGCTGCTCCGGAAATACCCAGTGGGAGCCCATACCGGCCTTTTGGGGCGTATGTCCTGTGCTCGCCGGATGGTGCGGCATGTGTCGACAATCCAACAGCAGCAGTTCAAGATGCTATATGCAACATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATTTTGAGACAGAGCGAGTAAGTAATACATGGGTGAGTAAAATATTTTTCTCAATAGTCCTAAAATATTCTCAACCACTATTATTCAGCAGAACATGAAATCAATCCCAATATACCCGATTCCCAAAATATCTTAGTTCCGTACCTCTATCAACGAGATCCTGTCGTCGGCGGATGGCAAACAACATAACCTTAACACCTCAAGCATATTCAATCCGAACATTACACAATTTCAATAGGAGTACTACCTTTTAACTTTTCCTCGAAACCACAAAACTAAAACTCCACAAGTTCCTTGATACAAAACCCGCCGAATTATTTGACCAAAATGGTACATCCTCCGTTTTAAAAATATAATTTTTAAGATTAGACATAGGTATTAAGAAAACTGGTGAAAAATTAAATTGAAAGAGGTTATAGTTAATTGAGAAGAAAATATGGATGAAGAAATTAATTATATTTTAGAATGAATTTTAAAGATTAAAAGTTATTATATTTTAGAACAAAGGAAACAGAACATTCCAAAAAAAAAAAGCAGAACCAAATTAAGGGCCTGTTTAGTACAGCTCCAACTCCTAAATATTGCTTCAGGAGTTAAGTCTGGAGTGAAGTTGTGGAGCTGCCTAAACCCAGCTCCACAACTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025494