BGIOSGA025502

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Revision as of 06:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025502| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025502, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA025502

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025502, complete gene.

LocusTag

OSJNBB0002J01.20

Ensembl Transcript ID

BGIOSGA025502-TA

Ensembl Protein ID

BGIOSGA025502-PA

Length

2643

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:9890531..9893173

Sequence Coding Region

9890531..9891436,9891561..9891761,9892285..9892480,9892989..9893173

Genome Context

<gbrowseImage1> name=IndicaChromosome07:9890531..9893173 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:9890531..9893173 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCTCGCGAGAGGTTTTCAAGTATCACCCTTTGCCTACACCGGGAGTGGAAAACAGTTTTAAGGATGAGATCCAATCCAAGGTTTTGGGCACGATAGGGGATGTGATGAACTCATTTGATCCAAAGTCATTCCCACAGCATGTAGAAGGAGCACTGGGAACAGCTGGAAACATCATCAATTCCTTTGAGTCAAAATTGGCTGAGCACAAGCAATTTGATTTTGGTGGCAAAACCAATTTTTATGGCTATGATTGTGCGGACGATGGTTGGGGATCTGCACCCTTGAAGGCAGATAAGCCGGTAAACCTTAGAAATCTGCTGGGTGGTTTAATTGCAATCATCAGTCGTGGCGGCAAAAATTCTGAAATTCAACCGCCAAAGGACACTAAGTCTAGTGTCGCATTCTTAGGGTCAGGTAACGATGGAGAAACATTCTTGCACGCCTCAGTCTATGTGCCAAGTGCTCCACCATTGCTTGACGAAGAAGCTCTGAATTACAATGTGTATAGGGTTGTGATTGAAGCAGAACCACCAGAATGGTTACCTGATAGTTATGCTAACTCATGCATGCAATGCGCTGCTTCTTTTACTGTTGTTACTCGTGGAAGGCATCATTGTCGATTTTGTGGAGGGATATTTTGTAGGACATGCTCAAAAGGCAGATGTCTGTTGCCAGCCAAGTTTCGTGAGCGGAATCCGCAAAGGGTTTGTGATGCTTGTTATGATAGGCTTGATCCGTTGCAGAACTTATTCATTAATTCTATTAGCAATGCCACACAGACTGCAAAGCATGATGTTATGGATTGGACTAGTACCAGGGGGTGGTTGAATTTGCCTATTGGATTAACAATGGAACATGAGATTTACAAGGCCGCAAATTCTGTGAGGAGCTATAGCCAGATTGCAAGGCTAAACCCCGAAAGGTCTATTCCTCATGCAGTCCTTAGTGGAGCAAGTGGGCTTGCTATCCTGACAGTTGTAAAAGCTGGTGCACTTCTTACATACAAACTTGGAACTGGCCTAGTAGTTGCTCGAAGATCAGATGGATCTTGGTCACCACCATCAGCAATCGTTTCAGTTGGGTTAGGATGGGGAGCACAGGTTGGTGCTGAGCTAATGGATTTCATCATAGTGCTTCGTGGTCTGGAAGCTGTCAGGACTTTTAGCAGCCAGATGCATTTTTCTGTTGGGGCAGGTTTAAGTGCTGCAGCAGGGCCTGTTGGTAGAGTGCTAGAGGCTGACTTGAGAGCTGGTGATAAAGGCTCAGGTGTTTGTTATACATATAGCTGCAGCAAAGGTGCATTCATTGGTGTTTCGTTGGAAGGGAACTTCGTTGCAACCCGAAGGGACGCAAATCTGCGGTTTTACGGCGACCCGTATCTGACAACCAGCGATATTCTCATGGGGGATATGCAGAGACCAAATGCTGCCAAGTTTCTGTACACAGCGTTGGATGGCCTGTACTCTGGGCTGAGTCGTTAG</cdnaseq>

Protein Sequence

<aaseq>MATSREVFKYHPLPTPGVENSFKDEIQSKVLGTIGDVMNSFDPKSFPQHVEGALGTAGNIINSFESKLAEHKQFDFGGKTNFYGYDCADDGWGSAPLKADKPVNLRNLLGGLIAIISRGGKNSEIQPPKDTKSSVAFLGSGNDGETFLHASVYVPSAPPLLDEEALNYNVYRVVIEAEPPEWLPDSYANSCMQCAASFTVVTRGRHHCRFCGGIFCRTCSKGRCLLPAKFRERNPQRVCDACYDRLDPLQNLFINSISNATQTAKHDVMDWTSTRGWLNLPIGLTMEHEIYKAANSVRSYSQIARLNPERSIPHAVLSGASGLAILTVVKAGALLTYKLGTGLVVARRSDGSWSPPSAIVSVGLGWGAQVGAELMDFIIVLRGLEAVRTFSSQMHFSVGAGLSAAAGPVGRVLEADLRAGDKGSGVCYTYSCSKGAFIGVSLEGNFVATRRDANLRFYGDPYLTTSDILMGDMQRPNAAKFLYTALDGLYSGLSR</aaseq>

Gene Sequence

<dnaseqindica>1..906#1031..1231#1755..1950#2459..2643#ATGGCGACCTCGCGAGAGGTTTTCAAGTATCACCCTTTGCCTACACCGGGAGTGGAAAACAGTTTTAAGGATGAGATCCAATCCAAGGTTTTGGGCACGATAGGGGATGTGATGAACTCATTTGATCCAAAGTCATTCCCACAGCATGTAGAAGGAGCACTGGGAACAGCTGGAAACATCATCAATTCCTTTGAGTCAAAATTGGCTGAGCACAAGCAATTTGATTTTGGTGGCAAAACCAATTTTTATGGCTATGATTGTGCGGACGATGGTTGGGGATCTGCACCCTTGAAGGCAGATAAGCCGGTAAACCTTAGAAATCTGCTGGGTGGTTTAATTGCAATCATCAGTCGTGGCGGCAAAAATTCTGAAATTCAACCGCCAAAGGACACTAAGTCTAGTGTCGCATTCTTAGGGTCAGGTAACGATGGAGAAACATTCTTGCACGCCTCAGTCTATGTGCCAAGTGCTCCACCATTGCTTGACGAAGAAGCTCTGAATTACAATGTGTATAGGGTTGTGATTGAAGCAGAACCACCAGAATGGTTACCTGATAGTTATGCTAACTCATGCATGCAATGCGCTGCTTCTTTTACTGTTGTTACTCGTGGAAGGCATCATTGTCGATTTTGTGGAGGGATATTTTGTAGGACATGCTCAAAAGGCAGATGTCTGTTGCCAGCCAAGTTTCGTGAGCGGAATCCGCAAAGGGTTTGTGATGCTTGTTATGATAGGCTTGATCCGTTGCAGAACTTATTCATTAATTCTATTAGCAATGCCACACAGACTGCAAAGCATGATGTTATGGATTGGACTAGTACCAGGGGGTGGTTGAATTTGCCTATTGGATTAACAATGGAACATGAGATTTACAAGGCCGCAAATTCTGTGAGGAGCTATAGCCAGGTTTGAGGATACTGATTTTGATTTCTTATCGCCTCCTTACATATTTAATCGCCACTCTCATACATGTTTAATTGCAATATTTAGGATATACCCCTACTAATGAATCATACAAATTTTAATGCAGATTGCAAGGCTAAACCCCGAAAGGTCTATTCCTCATGCAGTCCTTAGTGGAGCAAGTGGGCTTGCTATCCTGACAGTTGTAAAAGCTGGTGCACTTCTTACATACAAACTTGGAACTGGCCTAGTAGTTGCTCGAAGATCAGATGGATCTTGGTCACCACCATCAGCAATCGTTTCAGTTGGGTTAGGATGGGGAGCACAGGTATTAACTACATTGCTAATTTCATCTCTGTCTTTGATATGGACAATTTGTTGTCCATCAATTTATGAAATGCGTTTTTTTTTTGTGTTGTTACACTTAATACAGTTTGCTTAATTGCTCTAGCTTTCCTTGTGGTGTAGAAATTATCCACATGCATTGCCCATATTTGTCTTTGGGTAAAAAAGTAATGTAATGGACATTTTTTGTATTTCCTGATGGAAAATAGTACAGAGTGTGCATGCCTGCACAAGAGCTCGTAATATTTAAGTGCTTGTTGTGGCACTCAATTTACCTTTAGGTAAAAATAGTTTTTTTTTTGAATATGAACATCAGGAGGAAACTGCTTCCTTTTGTTGTGAATGTTACGTGATTACTGGCATTAACAAACGAAATTATGTTTTATGTTTACTTGATGAGTAAAAATATGTTAATATGATTTCAGCCATAATTCAGGAGGTTTCCTAATATTTACTTTTTACATGTTATACTCTTGTATGTTGTATTCTTATGTTTGATCATACAGGTTGGTGCTGAGCTAATGGATTTCATCATAGTGCTTCGTGGTCTGGAAGCTGTCAGGACTTTTAGCAGCCAGATGCATTTTTCTGTTGGGGCAGGTTTAAGTGCTGCAGCAGGGCCTGTTGGTAGAGTGCTAGAGGCTGACTTGAGAGCTGGTGATAAAGGCTCAGGTGTTTGTTATACATATAGCTGCAGCAAAGGTAATCTTTCCATCTGATCGTAGTTCTTAAGCCTCCCTAGTTGCATTGAAGTCAGTCTCTGTTTCTATTGGAGTATAAATTCGTAGGAAGAAAATATGTTGCAGAAACCTTTTTTCTGATGCAGTAAATGATGATTATATATATAATGCAGTAAATGATGATGTGTTGTTAACTCGTAATCTTAACAAGCGCTTAACATCTTAGTGATGTTCTTTTTTTTTCGGAAGAAGGGCAGGTGGGCCCTCTTAGGCTCTTATTAAAGAGAAGGAATAAAAGCAAAAGTTCTACCAGTCCAACATCTTATTGATGATCATTTTAAAAAACCCTGAACTTTTTATAAGCGACCTTGCTTCCCACTTTTTTTTTTCTCAAATATTCCGAAATACAACGAACCATTTCAGAAACCCAGCATCTTTGTGTGTTCTTGTTCCTAATGTTTCATAATGACCATGCATGGATGTGTGGCTATAACTATTCTTTGTGTGGTTGATTCGTGATGACTCTGCAGGTGCATTCATTGGTGTTTCGTTGGAAGGGAACTTCGTTGCAACCCGAAGGGACGCAAATCTGCGGTTTTACGGCGACCCGTATCTGACAACCAGCGATATTCTCATGGGGGATATGCAGAGACCAAATGCTGCCAAGTTTCTGTACACAGCGTTGGATGGCCTGTACTCTGGGCTGAGTCGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025502